def setUpClass(cls):
cls.src = taxon_distance.TaxonDist(debugging=True)
""" Reactions Controller
:Author: Zhouyang Lian < *****@*****.** >
:Date: 2019-10-21
:Copyright: 2019, Karr Lab
:License: MIT
"""
from datanator_query_python.config.query_manager import RxnManager
from datanator_query_python.aggregate import pipelines
from datanator_query_python.config import query_manager
from datanator_rest_api.util import paginator, taxon_distance
from collections import deque
r_manager = RxnManager().rxn_manager()
dist_manager = taxon_distance.TaxonDist()
def get_kegg_meta(ec, projection):
return r_manager.db_obj['kegg_orthology'].find_one(
filter={'definition.ec_code': ec}, projection=projection)
class kinlaw_by_rxn:
def get(
substrates,
products,
_from,
size,
bound,
dof,