'columns': ['Title', 'Description']},
{'id':'inactive',
'title': _('Dormant'),
'contentFilter': {'inactive_state': 'inactive'},
'transitions': [{'id':'activate'}, ],
'columns': ['Title', 'Description']},
{'id':'all',
'title': _('All'),
'contentFilter':{},
'columns': ['Title', 'Description']},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['Description'] = obj.Description()
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class InstrumentTypes(ATFolder):
implements(IInstrumentTypes)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(InstrumentTypes, PROJECTNAME)
'Description']},
{'id':'all',
'title': _('All'),
'contentFilter':{},
'columns': ['Title',
'Description']},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['Description'] = obj.Description()
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class ContainerTypes(ATFolder):
implements(IContainerTypes)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(ContainerTypes, PROJECTNAME)
'columns': ['Title']},
{'id':'inactive',
'title': _('Dormant'),
'contentFilter': {'inactive_state': 'inactive'},
'transitions': [{'id':'activate'}, ],
'columns': ['Title']},
{'id':'all',
'title': _('All'),
'contentFilter':{},
'columns': ['Title']},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class BatchLabels(ATFolder):
implements(IBatchLabels)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(BatchLabels, PROJECTNAME)
'index': 'description',
'toggle': True},
}
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter':{},
'columns': ['Title',
'Description']},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
items[x]['Description'] = obj.Description()
return items
schema = ATFolderSchema.copy()
class AttachmentTypes(ATFolder):
implements(IAttachmentTypes)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(AttachmentTypes, PROJECTNAME)
{
'id': 'all',
'title': _('All'),
'contentFilter': {},
'columns': ['Title']
},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class BatchLabels(ATFolder):
implements(IBatchLabels)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(BatchLabels, PROJECTNAME)
items[x]['replace']['ManagerEmail'] = "<a href='%s'>%s</a>"%\
('mailto:%s' % items[x]['ManagerEmail'],
items[x]['ManagerEmail'])
return items
schema = ATFolderSchema.copy()
class Departments(ATFolder):
implements(IDepartments)
displayContentsTab = False
schema = schema
def getContacts(self):
pc = getToolByName(self, 'portal_catalog')
bc = getToolByName(self, 'bika_catalog')
bsc = getToolByName(self, 'bika_setup_catalog')
# fallback - all Lab Contacts
pairs = []
for contact in bsc(portal_type='LabContact',
inactive_state='active',
sort_on='sortable_title'):
pairs.append((contact.UID, contact.Title))
return DisplayList(pairs)
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(Departments, PROJECTNAME)
atapi.StringField(
'DocumentLocation',
widget=atapi.StringWidget(
label=_("Document Location"),
description=_("Location where the document set is shelved"),
)),
atapi.StringField(
'DocumentType',
required=1,
widget=atapi.StringWidget(
label=_("Document Type"),
description=
_("Type of document (e.g. user manual, instrument specifications, image, ...)"
),
)),
))
TitleField = schema['title']
TitleField.required = 0
TitleField.widget.visible = False
class Multifile(BaseContent):
# It implements the IEthnicity interface
implements(IMultifile)
schema = schema
# Activating the content type in Archetypes' internal types registry
atapi.registerType(Multifile, config.PROJECTNAME)
{
'id': 'all',
'title': _('All'),
'contentFilter': {},
'columns': ['Title', 'Description']
},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['Description'] = obj.Description()
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class Manufacturers(ATFolder):
implements(IManufacturers)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(Manufacturers, PROJECTNAME)
items[x]['Description'] = obj.Description()
if obj.aq_parent.portal_type == 'Client':
items[x]['Owner'] = obj.aq_parent.Title()
else:
items[x]['Owner'] = self.context.bika_setup.laboratory.Title()
return items
schema = ATFolderSchema.copy()
class StorageLocations(ATFolder):
implements(IStorageLocations)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(StorageLocations, PROJECTNAME)
class ajax_StorageLocations(BrowserView):
""" The autocomplete data source for storage location selection widgets.
Returns a JSON list of storage location titles.
Request parameters:
- term: the string which will be searched against all Storage Location
titles.
- _authenticator: The plone.protect authenticator.
"""
def filter_list(self, items, searchterm):
"""ReferenceSamplesFolder is a fake folder to live in the nav bar. It has
view from browser/referencesample.py wired to it.
"""
from dependencies.dependency import schemata
from dependencies import atapi
from dependencies.dependency import permissions
from dependencies.dependency import getToolByName
from lims.config import PROJECTNAME
from dependencies.dependency import ClassSecurityInfo
from lims.interfaces import IReferenceSamplesFolder, IHaveNoBreadCrumbs
from dependencies import folder
from dependencies.dependency import implements
from lims import bikaMessageFactory as _
from lims.utils import t
schema = folder.ATFolderSchema.copy()
class ReferenceSamplesFolder(folder.ATFolder):
implements(IReferenceSamplesFolder, IHaveNoBreadCrumbs)
displayContentsTab = False
schema = schema
security = ClassSecurityInfo()
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(ReferenceSamplesFolder, PROJECTNAME)
from lims.utils import isActive
"""BatchFolder contains AR Batches.
"""
from dependencies.dependency import schemata
from dependencies import atapi
from dependencies.dependency import DisplayList
from dependencies.dependency import permissions
from dependencies.dependency import getToolByName
from lims.config import PROJECTNAME
from dependencies.dependency import ClassSecurityInfo
from lims.interfaces import IBatchFolder, IHaveNoBreadCrumbs
from dependencies import folder
from dependencies.dependency import implements
from lims import bikaMessageFactory as _
from lims.utils import t
import json
schema = folder.ATFolderSchema.copy()
class BatchFolder(folder.ATFolder):
implements(IBatchFolder, IHaveNoBreadCrumbs)
schema = schema
displayContentsTab = False
security = ClassSecurityInfo()
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(BatchFolder, PROJECTNAME)
widget=TextAreaWidget(label=_("Remarks"), ),
),
))
schema['title'].widget.label = 'Asset Number'
class InstrumentCalibration(BaseFolder):
security = ClassSecurityInfo()
schema = schema
displayContentsTab = False
_at_rename_after_creation = True
def _renameAfterCreation(self, check_auto_id=False):
from lims.idserver import renameAfterCreation
renameAfterCreation(self)
def getLabContacts(self):
bsc = getToolByName(self, 'bika_setup_catalog')
# fallback - all Lab Contacts
pairs = []
for contact in bsc(portal_type='LabContact',
inactive_state='active',
sort_on='sortable_title'):
pairs.append((contact.UID, contact.Title))
return DisplayList(pairs)
atapi.registerType(InstrumentCalibration, PROJECTNAME)
'inactive_state': 'inactive'
},
'transitions': [
{
'id': 'activate'
},
],
'columns': ['Title', 'Description']
})
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class SampleMatrices(ATFolder):
implements(ISampleMatrices)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(SampleMatrices, PROJECTNAME)
self.show_select_column = True
self.review_states.append(
{'id':'active',
'title': _('Active'),
'contentFilter': {'inactive_state': 'active'},
'transitions': [{'id':'deactivate'}, ],
'columns': ['Title', 'Description']})
self.review_states.append(
{'id':'inactive',
'title': _('Dormant'),
'contentFilter': {'inactive_state': 'inactive'},
'transitions': [{'id':'activate'}, ],
'columns': ['Title', 'Description']})
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class SamplingDeviations(ATFolder):
implements(ISamplingDeviations)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(SamplingDeviations, PROJECTNAME)
def getSampleTypes(self):
""" return all sampletypes """
sampletypes = []
bsc = getToolByName(self, 'bika_setup_catalog')
for st in bsc(portal_type='SampleType', sort_on='sortable_title'):
sampletypes.append((st.UID, st.Title))
return DisplayList(sampletypes)
def getAnalysisSpecsStr(self, keyword):
specstr = ''
specs = self.getResultsRangeDict()
if keyword in specs.keys():
specs = specs[keyword]
smin = specs.get('min', '')
smax = specs.get('max', '')
if smin and smax:
specstr = '%s - %s' % (smin, smax)
elif smin:
specstr = '> %s' % specs['min']
elif smax:
specstr = '< %s' % specs['max']
return specstr
def getClientUID(self):
return self.aq_parent.UID()
atapi.registerType(AnalysisSpec, PROJECTNAME)
'Volume',
'Unit',
'Price',
'VATAmount',
'TotalPrice']},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['Volume'] = obj.getVolume()
items[x]['Unit'] = obj.getUnit()
items[x]['Price'] = obj.getPrice()
items[x]['VATAmount'] = obj.getVATAmount()
items[x]['TotalPrice'] = obj.getTotalPrice()
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class LabProducts(ATFolder):
implements(ILabProducts)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(LabProducts, PROJECTNAME)
('getDateSampled', _('Date Sampled')),
('getProfilesTitle', _('Analysis Profiles')),
('getRequestID', _('Request ID')),
('getSampleID', _('Sample ID')),
('getSamplePointTitle', _('Sample Point')),
('getSampleTypeTitle', _('Sample Type')),
('review_state', _p('Review state')),
))
security.declareProtected(View, 'results')
def results(self, batch=True, b_start=0, b_size=None, sort_on=None,
brains=False, catalog_name='bika_catalog'):
"""Get results"""
if sort_on is None:
sort_on = self.getSort_on()
if b_size is None:
b_size = self.getLimit()
return self.getQuery(batch=batch,
b_start=b_start,
b_size=b_size,
sort_on=sort_on,
brains=brains,
catalog_name='bika_catalog')
schemata.finalizeATCTSchema(QuerySchema, folderish=False)
atapi.registerType(Query, PROJECTNAME)
'id': 'default',
'title': _('All'),
'contentFilter': {},
'columns': ['Title', 'Description']
},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
items[x]['Description'] = obj.Description()
return items
schema = ATFolderSchema.copy()
class AttachmentTypes(ATFolder):
implements(IAttachmentTypes)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(AttachmentTypes, PROJECTNAME)
'Description',
'Formula']},
{'id':'all',
'title': _('All'),
'contentFilter':{},
'columns': ['Title',
'Description',
'Formula']},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
items[x]['Description'] = obj.Description()
items[x]['Formula'] = obj.getMinifiedFormula()
return items
schema = ATFolderSchema.copy()
class Calculations(ATFolder):
implements(ICalculations)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(Calculations, PROJECTNAME)
"""ClientFolder is a container for Client instances.
"""
from dependencies.dependency import schemata
from dependencies import atapi
from dependencies.dependency import permissions
from dependencies.dependency import DisplayList
from dependencies.dependency import getToolByName
from lims.config import PROJECTNAME
from dependencies.dependency import ClassSecurityInfo
from lims.interfaces import IClientFolder, IHaveNoBreadCrumbs
from dependencies import folder
from dependencies.dependency import implements
from lims import bikaMessageFactory as _
from lims.utils import t
schema = folder.ATFolderSchema.copy()
schema['id'].widget.visible = {'edit': 'hidden', 'view': 'invisible'}
schema['title'].widget.visible = {'edit': 'hidden', 'view': 'invisible'}
class ClientFolder(folder.ATFolder):
implements(IClientFolder, IHaveNoBreadCrumbs)
displayContentsTab = False
schema = schema
security = ClassSecurityInfo()
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(ClientFolder, PROJECTNAME)
else:
items[x]['Owner'] = self.context.bika_setup.laboratory.Title()
return items
schema = ATFolderSchema.copy()
class SamplePoints(ATFolder):
implements(ISamplePoints)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(SamplePoints, PROJECTNAME)
class ajax_SamplePoints(BrowserView):
""" The autocomplete data source for sample point selection widgets.
Returns a JSON list of sample point titles.
Request parameters:
- sampletype: if specified, it's expected to be the title
of a SamplePoint object. Optionally, the string 'Lab: ' might be
prepended, to distinguish between Lab and Client objects.
- term: the string which will be searched against all SamplePoint
titles.
'columns': ['Title',
'Description',
'ProfileKey']},
{'id':'all',
'title': _('All'),
'contentFilter':{},
'columns': ['Title',
'Description',
'ProfileKey']},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['Title'] = obj.Title()
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['title'])
items[x]['ProfileKey'] = obj.getProfileKey()
return items
schema = ATFolderSchema.copy()
class AnalysisProfiles(ATFolder):
implements(IAnalysisProfiles)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(AnalysisProfiles, PROJECTNAME)
'columns': ['Title',
'Description',
'Instrument']},
{'id':'all',
'title': _('All'),
'contentFilter':{},
'columns': ['Title',
'Description',
'Instrument']},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['Description'] = obj.Description()
items[x]['Instrument'] = obj.getInstrument() and obj.getInstrument().Title() or ' '
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class WorksheetTemplates(ATFolder):
implements(IWorksheetTemplates)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(WorksheetTemplates, PROJECTNAME)
items[x]['ExpiryDate'] = "No date avaliable"
else:
items[x]['ExpiryDate'] = data.asdatetime().strftime(self.date_format_short)
if obj.isOutOfDate():
items[x]['WeeksToExpire'] = "Out of date"
else:
date = int(str(obj.getWeeksToExpire()).split(',')[0].split(' ')[0])
weeks,days = divmod(date,7)
items[x]['WeeksToExpire'] = str(weeks)+" weeks"+" "+str(days)+" days"
if obj.getMethod():
items[x]['Method'] = obj.getMethod().Title()
items[x]['replace']['Method'] = "<a href='%s'>%s</a>" % \
(obj.getMethod().absolute_url(), items[x]['Method'])
else:
items[x]['Method'] = ''
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class Instruments(ATFolder):
implements(IInstruments)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(Instruments, PROJECTNAME)
schema['title'].widget.label=_("Certificate Code")
class InstrumentCertification(BaseFolder):
security = ClassSecurityInfo()
schema = schema
displayContentsTab = False
_at_rename_after_creation = True
def _renameAfterCreation(self, check_auto_id=False):
from lims.idserver import renameAfterCreation
renameAfterCreation(self)
def getLabContacts(self):
bsc = getToolByName(self, 'bika_setup_catalog')
# fallback - all Lab Contacts
pairs = []
for contact in bsc(portal_type='LabContact',
inactive_state='active',
sort_on='sortable_title'):
pairs.append((contact.UID, contact.Title))
return DisplayList(pairs)
def getInstrumentAssetNumber(self):
"""
Obtains the instrument's asset number
:return: The asset number string
"""
return self.aq_parent.getAssetNumber() if self.aq_parent.getAssetNumber() else ''
atapi.registerType(InstrumentCertification, PROJECTNAME)
""" Return the current list of task types
"""
types = [
('Calibration', safe_unicode(_('Calibration')).encode('utf-8')),
('Enhancement', safe_unicode(_('Enhancement')).encode('utf-8')),
('Preventive', safe_unicode(_('Preventive')).encode('utf-8')),
('Repair', safe_unicode(_('Repair')).encode('utf-8')),
('Validation', safe_unicode(_('Validation')).encode('utf-8'))
]
return DisplayList(types)
def getCriteria(self):
criteria = ""
criterias = self.getScheduleCriteria()
if criterias and len(criterias) > 0:
crit = criterias[0]
if crit['fromenabled'] == True and crit['fromdate']:
criteria += _('From') + " " + crit['fromdate'] + " "
if crit['repeatenabled'] == True and crit['repeatunit'] and crit[
'repeatperiod']:
criteria += _(
"repeating every") + " " + crit['repeatunit'] + " " + _(
crit['repeatperiod']) + " "
if crit['repeatuntilenabled'] == True and crit['repeatuntil']:
criteria += _("until") + " " + crit['repeatuntil']
return criteria
atapi.registerType(InstrumentScheduledTask, PROJECTNAME)
"""SamplesFolder is a fake folder to live in the nav bar. It has
view from browser/samplesfolder.py wired to it.
"""
from dependencies.dependency import schemata
from dependencies import atapi
from dependencies.dependency import permissions
from dependencies.dependency import getToolByName
from lims.config import PROJECTNAME
from dependencies.dependency import ClassSecurityInfo
from lims.interfaces import ISamplesFolder, IHaveNoBreadCrumbs
from dependencies import folder
from dependencies.dependency import implements
from lims import bikaMessageFactory as _
from lims.utils import t
schema = folder.ATFolderSchema.copy()
class SamplesFolder(folder.ATFolder):
implements(ISamplesFolder, IHaveNoBreadCrumbs)
displayContentsTab = False
schema = schema
security = ClassSecurityInfo()
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(SamplesFolder, PROJECTNAME)
security.declarePublic('getRemainingSampleTypes')
def getSampleTypes(self):
""" return all sampletypes """
sampletypes = []
bsc = getToolByName(self, 'bika_setup_catalog')
for st in bsc(portal_type = 'SampleType',
sort_on = 'sortable_title'):
sampletypes.append((st.UID, st.Title))
return DisplayList(sampletypes)
def getAnalysisSpecsStr(self, keyword):
specstr = ''
specs = self.getResultsRangeDict()
if keyword in specs.keys():
specs = specs[keyword]
smin = specs.get('min', '')
smax = specs.get('max', '')
if smin and smax:
specstr = '%s - %s' % (smin, smax)
elif smin:
specstr = '> %s' % specs['min']
elif smax:
specstr = '< %s' % specs['max']
return specstr
def getClientUID(self):
return self.aq_parent.UID();
atapi.registerType(AnalysisSpec, PROJECTNAME)
else:
items[x]['Instrument'] = ''
if obj.getCalculation():
items[x]['Calculation'] = obj.getCalculation().Title()
items[x]['replace']['Calculation'] = "<a href='%s'>%s</a>" % \
(obj.getCalculation().absolute_url(), items[x]['Calculation'])
else:
items[x]['Calculation'] = ''
img_url = '<img src="' + self.portal_url + '/++resource++bika.lims.images/ok.png"/>'
items[x]['ManualEntry'] = obj.isManualEntryOfResults()
items[x]['replace'][
'ManualEntry'] = img_url if obj.isManualEntryOfResults(
) else ' '
return items
schema = ATFolderSchema.copy()
class Methods(ATFolder):
implements(IMethods)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(Methods, PROJECTNAME)
)
),
atapi.StringField('DocumentLocation',
widget = atapi.StringWidget(
label=_("Document Location"),
description=_("Location where the document set is shelved"),
)
),
atapi.StringField('DocumentType',
required=1,
widget = atapi.StringWidget(
label=_("Document Type"),
description=_("Type of document (e.g. user manual, instrument specifications, image, ...)"),
)
),
))
TitleField = schema['title']
TitleField.required = 0
TitleField.widget.visible = False
class Multifile(BaseContent):
# It implements the IEthnicity interface
implements(IMultifile)
schema = schema
# Activating the content type in Archetypes' internal types registry
atapi.registerType(Multifile, config.PROJECTNAME)
(obj.getSamplePoints()[0].absolute_url(), items[x]['getSamplePoints'])
else:
items[x]['getSamplePoints'] = ''
return items
schema = ATFolderSchema.copy()
class SampleTypes(ATFolder):
implements(ISampleTypes)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(SampleTypes, PROJECTNAME)
class ajax_SampleTypes(BrowserView):
""" autocomplete data source for sample types field
return JSON data [string,string]
if "samplepoint" is in the request, it's expected to be a title string
The objects returned will be filtered by samplepoint's SampleTypes.
if no items are found, all items are returned.
If term is a one or two letters, return items that begin with them
If there aren't any, return items that contain them
"""
def __call__(self):
CheckAuthenticator(self.request)
bsc = getToolByName(self.context, 'bika_setup_catalog')
term = safe_unicode(self.request.get('term', '')).lower()
(items[x]['url'], items[x]['Title'])
if items[x]['ManagerEmail']:
items[x]['replace']['ManagerEmail'] = "<a href='%s'>%s</a>"%\
('mailto:%s' % items[x]['ManagerEmail'],
items[x]['ManagerEmail'])
return items
schema = ATFolderSchema.copy()
class Departments(ATFolder):
implements(IDepartments)
displayContentsTab = False
schema = schema
def getContacts(self):
pc = getToolByName(self, 'portal_catalog')
bc = getToolByName(self, 'bika_catalog')
bsc = getToolByName(self, 'bika_setup_catalog')
# fallback - all Lab Contacts
pairs = []
for contact in bsc(portal_type = 'LabContact',
inactive_state = 'active',
sort_on = 'sortable_title'):
pairs.append((contact.UID, contact.Title))
return DisplayList(pairs)
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(Departments, PROJECTNAME)
'contentFilter': {'inactive_state': 'inactive'},
'columns': ['title',
'sortKey',
'pricePremium',
'isDefault',
]},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if 'obj' not in items[x]:
continue
items[x]['replace']['title'] = \
"<a href='%s'>%s</a>" % (items[x]['url'], items[x]['title'])
return items
schema = ATFolderSchema.copy()
class ARPriorities(ATFolder):
implements(IARPriorities)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(ARPriorities, PROJECTNAME)
"""
"""
from dependencies.dependency import ClassSecurityInfo
from lims.config import PROJECTNAME
from lims.interfaces import IQueryFolder, IHaveNoBreadCrumbs
from dependencies import folder
from dependencies import atapi
from dependencies.dependency import schemata
from dependencies.dependency import implements
schema = folder.ATFolderSchema.copy()
class QueryFolder(folder.ATFolder):
implements(IQueryFolder, IHaveNoBreadCrumbs)
schema = schema
displayContentsTab = False
security = ClassSecurityInfo()
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(QueryFolder, PROJECTNAME)
"""Supply Order Folder contains Supply Orders
"""
from dependencies.dependency import schemata
from dependencies import atapi
from lims.config import PROJECTNAME
from dependencies.dependency import ClassSecurityInfo
from lims.interfaces import ISupplyOrderFolder, IHaveNoBreadCrumbs
from dependencies import folder
from dependencies.dependency import implements
schema = folder.ATFolderSchema.copy()
class SupplyOrderFolder(folder.ATFolder):
implements(ISupplyOrderFolder, IHaveNoBreadCrumbs)
schema = schema
displayContentsTab = False
security = ClassSecurityInfo()
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(SupplyOrderFolder, PROJECTNAME)
from lims.idserver import renameAfterCreation
renameAfterCreation(self)
def Title(self):
""" Return the contact's Fullname as title """
return safe_unicode(self.getFullname()).encode('utf-8')
security.declareProtected(ManageClients, 'hasUser')
def hasUser(self):
""" check if contact has user """
return self.portal_membership.getMemberById(
self.getUsername()) is not None
def getContacts(self, dl=True):
pairs = []
objects = []
for contact in self.aq_parent.objectValues('Contact'):
if isActive(contact) and contact.UID() != self.UID():
pairs.append((contact.UID(), contact.Title()))
if not dl:
objects.append(contact)
pairs.sort(lambda x, y: cmp(x[1].lower(), y[1].lower()))
return dl and DisplayList(pairs) or objects
def getParentUID(self):
return self.aq_parent.UID()
atapi.registerType(Contact, PROJECTNAME)
self.show_select_column = True
self.review_states.append(
{'id':'active',
'title': _('Active'),
'contentFilter': {'inactive_state': 'active'},
'transitions': [{'id':'deactivate'}, ],
'columns': ['Title', 'Description']})
self.review_states.append(
{'id':'inactive',
'title': _('Dormant'),
'contentFilter': {'inactive_state': 'inactive'},
'transitions': [{'id':'activate'}, ],
'columns': ['Title', 'Description']})
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class SampleMatrices(ATFolder):
implements(ISampleMatrices)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(SampleMatrices, PROJECTNAME)
return DisplayList(cats)
def getContacts(self, only_active=True):
""" Return an array containing the contacts from this Client
"""
contacts = []
if only_active:
contacts = [
c
for c in self.objectValues("Contact")
if getCurrentState(c, StateFlow.inactive) == InactiveState.active
]
else:
contacts = self.objectValues("Contact")
return contacts
def getDecimalMark(self):
""" Return the decimal mark to be used on reports for this
client. If the client has DefaultDecimalMark selected, the
Default value from Bika Setup will be returned. Otherwise,
will return the value of DecimalMark.
"""
if self.getDefaultDecimalMark() == False:
return self.Schema()["DecimalMark"].get(self)
return self.bika_setup.getDecimalMark()
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(Client, PROJECTNAME)
ComputedField(
'ClientUID',
expression='here.getClient() and here.getClient().UID()',
widget=ComputedWidget(visible=False, ),
),
), )
schema['id'].required = False
schema['title'].required = False
class Report(BaseFolder):
security = ClassSecurityInfo()
displayContentsTab = False
schema = schema
_at_rename_after_creation = True
def _renameAfterCreation(self, check_auto_id=False):
from lims.idserver import renameAfterCreation
renameAfterCreation(self)
security.declarePublic('current_date')
def current_date(self):
""" return current date """
return DateTime()
atapi.registerType(Report, PROJECTNAME)
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['Fullname'] = obj.getFullname()
items[x]['Department'] = obj.getDepartmentTitle()
items[x]['BusinessPhone'] = obj.getBusinessPhone()
items[x]['Fax'] = obj.getBusinessFax()
items[x]['MobilePhone'] = obj.getMobilePhone()
items[x]['EmailAddress'] = obj.getEmailAddress()
items[x]['replace']['Fullname'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Fullname'])
return items
schema = ATFolderSchema.copy()
class LabContacts(ATFolder):
implements(ILabContacts)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(LabContacts, PROJECTNAME)
'columns': ['Title', 'Description', 'Department']
},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'):
continue
obj = items[x]['obj']
items[x]['Description'] = obj.Description()
items[x]['Department'] = obj.getDepartment() and obj.getDepartment(
).Title() or ''
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class AnalysisCategories(ATFolder):
implements(IAnalysisCategories)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(AnalysisCategories, PROJECTNAME)
)
self.review_states.append(
{
"id": "inactive",
"title": _("Dormant"),
"contentFilter": {"inactive_state": "inactive"},
"transitions": [{"id": "activate"}],
"columns": ["Title", "Description"],
}
)
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if "obj" in items[x]:
items[x]["replace"]["Title"] = "<a href='%s'>%s</a>" % (items[x]["url"], items[x]["Title"])
return items
schema = ATFolderSchema.copy()
class SampleConditions(ATFolder):
implements(ISampleConditions)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(SampleConditions, PROJECTNAME)
'columns': ['Title', 'Description', 'SortKey']},
{'id': 'all',
'title': _('All'),
'contentFilter': {},
'columns': ['Title', 'Description', 'SortKey']},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if 'obj' not in items[x]:
continue
obj = items[x]['obj']
items[x]['Description'] = obj.Description()
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class SubGroups(ATFolder):
implements(ISubGroups)
security = ClassSecurityInfo()
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(SubGroups, PROJECTNAME)
}
self.review_states = [{
'id':'default',
'title': _('Default'),
'contentFilter': {},
'columns': ['Title', 'Description']
}]
def folderitems(self):
items = BikaListingView.folderitems(self)
for item in items:
if not item.has_key('obj'): continue
obj = item['obj']
title_link = "<a href='%s'>%s</a>" % (item['url'], item['title'])
item['replace']['Title'] = title_link
return items
schema = ATFolderSchema.copy()
class SRTemplates(ATFolder):
implements(ISRTemplates)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(SRTemplates, PROJECTNAME)
'transitions': [{'id':'activate'}, ],
'columns': ['Name', 'Email', 'Phone', 'Fax']},
{'id':'all',
'title': _('All'),
'contentFilter':{},
'columns': ['Name', 'Email', 'Phone', 'Fax']},
]
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['Name'] = obj.getName()
items[x]['Email'] = obj.getEmailAddress()
items[x]['Phone'] = obj.getPhone()
items[x]['Fax'] = obj.getFax()
items[x]['replace']['Name'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Name'])
return items
schema = ATFolderSchema.copy()
class Suppliers(ATFolder):
implements(ISuppliers)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(Suppliers, PROJECTNAME)
_at_rename_after_creation = True
def _renameAfterCreation(self, check_auto_id=False):
from lims.idserver import renameAfterCreation
renameAfterCreation(self)
def getTaskTypes(self):
""" Return the current list of task types
"""
types = [('Calibration', safe_unicode(_('Calibration')).encode('utf-8')),
('Enhancement', safe_unicode(_('Enhancement')).encode('utf-8')),
('Preventive',safe_unicode(_('Preventive')).encode('utf-8')),
('Repair', safe_unicode(_('Repair')).encode('utf-8')),
('Validation', safe_unicode(_('Validation')).encode('utf-8'))]
return DisplayList(types)
def getCriteria(self):
criteria = "";
criterias = self.getScheduleCriteria()
if criterias and len(criterias) > 0:
crit = criterias[0]
if crit['fromenabled'] == True and crit['fromdate']:
criteria += _('From') + " " + crit['fromdate'] + " "
if crit['repeatenabled'] == True and crit['repeatunit'] and crit['repeatperiod']:
criteria += _("repeating every") + " " + crit['repeatunit'] + " " + _(crit['repeatperiod']) + " "
if crit['repeatuntilenabled'] == True and crit['repeatuntil']:
criteria += _("until") + " " + crit['repeatuntil']
return criteria;
atapi.registerType(InstrumentScheduledTask, PROJECTNAME)
if not self._findProfileKey(analyses[0]):
valid_item = False
item_remarks.append('\n%s: unknown Profile %s' \
% (aritem.getSampleName(), analyses[0]))
batch_remarks.append('\n%s: unknown Profile %s' \
% (aritem.getSampleName(), analyses[0]))
aritem.setRemarks(item_remarks)
#print item_remarks
if not valid_item:
valid_batch = False
if self.getNumberSamples() != len(aritems):
valid_batch = False
batch_remarks.append('\nNumber of samples specified (%s) does no match number listed (%s)' % (self.getNumberSamples(), len(aritems)))
self.edit(
Remarks=batch_remarks,
Status=valid_batch)
#print batch_remarks
return valid_batch
def _findProfileKey(self, key):
profiles = self.bika_setup_catalog(
portal_type = 'AnalysisProfile')
found = False
for brain in profiles:
if brain.getObject().getProfileKey() == key:
return brain.getObject()
atapi.registerType(ARImport, PROJECTNAME)
from lims.utils import isActive
"""BatchFolder contains AR Batches.
"""
from dependencies.dependency import schemata
from dependencies import atapi
from dependencies.dependency import DisplayList
from dependencies.dependency import permissions
from dependencies.dependency import getToolByName
from lims.config import PROJECTNAME
from dependencies.dependency import ClassSecurityInfo
from lims.interfaces import IBatchFolder, IHaveNoBreadCrumbs
from dependencies import folder
from dependencies.dependency import implements
from lims import bikaMessageFactory as _
from lims.utils import t
import json
schema = folder.ATFolderSchema.copy()
class BatchFolder(folder.ATFolder):
implements(IBatchFolder, IHaveNoBreadCrumbs)
schema = schema
displayContentsTab = False
security = ClassSecurityInfo()
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(BatchFolder, PROJECTNAME)
obj = items[x]['obj']
items[x]['Description'] = obj.Description()
items[x]['ContainerType'] = obj.getContainerType(
) and obj.getContainerType().Title() or ''
items[x]['Capacity'] = obj.getCapacity() and "%s" % \
(obj.getCapacity()) or ''
pre = obj.getPrePreserved()
pres = obj.getPreservation()
items[x]['Pre-preserved'] = ''
items[x]['after']['Pre-preserved'] = pre \
and "<a href='%s'>%s</a>" % (pres.absolute_url(), pres.Title()) \
or ''
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
schema = ATFolderSchema.copy()
class Containers(ATFolder):
implements(IContainers)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(Containers, PROJECTNAME)
"""AnalysisRequestsFolder is a fake folder to live in the nav bar. It has
view from browser/analysisrequest.py wired to it.
"""
from dependencies.dependency import schemata
from dependencies import atapi
# from OLiMS.dependencies.dependency import permissions
from dependencies.dependency import getToolByName
from lims.config import PROJECTNAME
from dependencies.dependency import ClassSecurityInfo
from lims.interfaces import IAnalysisRequestsFolder, IHaveNoBreadCrumbs
from dependencies import folder
from dependencies.dependency import implements
from lims import bikaMessageFactory as _
from lims.utils import t
schema = folder.ATFolderSchema.copy()
class AnalysisRequestsFolder(folder.ATFolder):
implements(IAnalysisRequestsFolder, IHaveNoBreadCrumbs)
schema = schema
displayContentsTab = False
security = ClassSecurityInfo()
schemata.finalizeATCTSchema(schema, folderish = True, moveDiscussion = False)
atapi.registerType(AnalysisRequestsFolder, PROJECTNAME)
from dependencies.dependency import ClassSecurityInfo
from lims import bikaMessageFactory as _
from lims.utils import t
from lims.config import ManageInvoices, PROJECTNAME
from lims.interfaces import IInvoiceFolder, IHaveNoBreadCrumbs
from dependencies import atapi
from dependencies.dependency import *
from dependencies import folder
from dependencies.dependency import schemata
from dependencies.dependency import permissions
from dependencies.dependency import UniqueObject
from dependencies.dependency import ConflictError
from dependencies.dependency import implements
schema = folder.ATFolderSchema.copy()
schema['id'].widget.visible = {'edit':'hidden', 'view':'invisible'}
schema['title'].widget.visible = {'edit':'hidden', 'view':'invisible'}
class InvoiceFolder(folder.ATFolder):
implements(IInvoiceFolder, IHaveNoBreadCrumbs)
displayContentsTab = False
schema = schema
security = ClassSecurityInfo()
atapi.registerType(InvoiceFolder, PROJECTNAME)
_at_rename_after_creation = True
def _renameAfterCreation(self, check_auto_id=False):
from lims.idserver import renameAfterCreation
renameAfterCreation(self)
def Title(self):
""" Return the contact's Fullname as title """
return safe_unicode(self.getFullname()).encode('utf-8')
security.declareProtected(ManageClients, 'hasUser')
def hasUser(self):
""" check if contact has user """
return self.portal_membership.getMemberById(
self.getUsername()) is not None
def getContacts(self, dl=True):
pairs = []
objects = []
for contact in self.aq_parent.objectValues('Contact'):
if isActive(contact) and contact.UID() != self.UID():
pairs.append((contact.UID(), contact.Title()))
if not dl:
objects.append(contact)
pairs.sort(lambda x, y: cmp(x[1].lower(), y[1].lower()))
return dl and DisplayList(pairs) or objects
def getParentUID(self):
return self.aq_parent.UID();
atapi.registerType(Contact, PROJECTNAME)
if obj.getAccredited():
after_icons += "<img src='++resource++bika.lims.images/accredited.png' title='%s'>" % (
_("Accredited"))
if obj.getReportDryMatter():
after_icons += "<img src='++resource++bika.lims.images/dry.png' title='%s'>" % (
_("Can be reported as dry matter"))
if obj.getAttachmentOption() == 'r':
after_icons += "<img src='++resource++bika.lims.images/attach_reqd.png' title='%s'>" % (
_("Attachment required"))
if obj.getAttachmentOption() == 'n':
after_icons += "<img src='++resource++bika.lims.images/attach_no.png' title='%s'>" % (
_('Attachment not permitted'))
if after_icons:
items[x]['after']['Title'] = after_icons
self.categories.sort()
return items
schema = ATFolderSchema.copy()
class AnalysisServices(ATFolder):
implements(IAnalysisServices)
displayContentsTab = False
schema = schema
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(AnalysisServices, PROJECTNAME)
"""Supply Order Folder contains Supply Orders
"""
from dependencies.dependency import schemata
from dependencies import atapi
from lims.config import PROJECTNAME
from dependencies.dependency import ClassSecurityInfo
from lims.interfaces import ISupplyOrderFolder, IHaveNoBreadCrumbs
from dependencies import folder
from dependencies.dependency import implements
schema = folder.ATFolderSchema.copy()
class SupplyOrderFolder(folder.ATFolder):
implements(ISupplyOrderFolder, IHaveNoBreadCrumbs)
schema = schema
displayContentsTab = False
security = ClassSecurityInfo()
schemata.finalizeATCTSchema(schema, folderish=True, moveDiscussion=False)
atapi.registerType(SupplyOrderFolder, PROJECTNAME)
