img, modality = loadZipDicom( fname[0] )
else:
if dirFlag:
if verbose:
print "directory"
img, modality = dicomutils.loadLargestSeries( fname[0] )
else:
# Case for a single volume image
if len(fname) == 1:
if verbose:
print "Reading volume: ", fname[0]
img = sitk.ReadImage( fname[0] )
modality = dicomutils.getModality(img)
else:
# Case for a series of image files
if verbose:
if verbose>1:
print "Reading images: ", fname
else:
l = len(fname)
print "Reading images: ", fname[0], fname[1], "...", fname[l-1]
isr = sitk.ImageSeriesReader()
isr.SetFileNames(fname)
img = isr.Execute()
firstslice = sitk.ReadImage( fname[0] )
modality = dicomutils.getModality(firstslice)
img, modality = loadZipDicom( fname[0] )
else:
if dirFlag:
if verbose:
print "directory"
img, modality = dicomutils.loadLargestSeries( fname[0] )
else:
# Case for a single volume image
if len(fname) == 1:
if verbose:
print "Reading volume: ", fname[0]
img = sitk.ReadImage( fname[0] )
modality = dicomutils.getModality(img)
else:
# Case for a series of image files
if verbose:
if verbose>1:
print "Reading images: ", fname
else:
l = len(fname)
print "Reading images: ", fname[0], fname[1], "...", fname[l-1]
isr = sitk.ImageSeriesReader()
isr.SetFileNames(fname)
img = isr.Execute()
firstslice = sitk.ReadImage( fname[0] )
modality = dicomutils.getModality(firstslice)