def setUpClass(cls):
super().setUpClass()
ContentType.objects.clear_cache()
clear_workflow_caches()
get_or_create_user('*****@*****.**', is_superuser=True)
settings.STORAGE_VAULT['dir'] = tempfile.mkdtemp()
settings.EMAIL_BACKEND = 'django.core.mail.backends.locmem.EmailBackend'
settings.EMAIL_BACKEND_UNFILTERED = 'django.core.mail.backends.locmem.EmailBackend'
settings.ETHICS_COMMISSION_UUID = 'ecececececececececececececececec'
integration_bootstrap.create_settings_dirs()
core_bootstrap.auth_groups()
core_bootstrap.medical_categories()
core_bootstrap.auth_user_testusers()
core_bootstrap.advanced_settings()
core_bootstrap.ethics_commissions()
documents_bootstrap.document_types()
documents_bootstrap.import_keys()
documents_bootstrap.create_local_storage_vault()
integration_bootstrap.workflow_sync()
core_bootstrap.auth_groups()
checklists_bootstrap.checklist_blueprints()
core_bootstrap.submission_workflow()
def create_user(self, name, extra=None, profile_extra=None):
extra = extra or {}
profile_extra = profile_extra or {}
user, created = get_or_create_user('{0}@example.com'.format(name),
is_superuser=True,
**extra)
user.set_password('password')
user.save()
profile = user.profile
for k, v in profile_extra.items():
setattr(profile, k, v)
profile.save()
return user
def _create_root_user():
root, _ = get_or_create_user('*****@*****.**')
root.first_name = ''
root.last_name = 'Ethik-Kommission'
root.is_staff = True
root.is_superuser = True
root.set_unusable_password() # root (System) is not supposed to login
root.save()
profile = root.profile
profile.forward_messages_after_minutes = 0 # Never forward messages
profile.gender = 'x'
profile.save()
def auth_user_developers():
''' Developer Account Creation '''
from ecs.core.bootstrap_settings import developers
for first, last, email, gender in developers:
user, created = get_or_create_user(email)
user.first_name = first
user.last_name = last
user.is_staff = False
user.is_superuser = False
user.save()
user.profile.forward_messages_after_minutes = 30
user.profile.gender = gender
user.profile.save()
def test_document_download_anyone(self):
submission_form = create_submission_form()
document_pk = submission_form.documents.get().pk
user, created = get_or_create_user('*****@*****.**')
user.set_password('password')
user.save()
self.client.logout()
self.client.login(email='*****@*****.**', password='******')
response = self.client.get(
reverse('ecs.core.views.submissions.download_document',
kwargs={
'submission_form_pk': submission_form.pk,
'document_pk': document_pk
}))
self.assertEqual(response.status_code, 404)
def setUp(self):
super().setUp()
checklists_bootstrap.checklist_blueprints()
bootstrap.ethics_commissions()
VALID_SUBMISSION_FORM_DATA['investigator-0-ethics_commission'] = [
str(EthicsCommission.objects.all()[0].pk)
]
VALID_SUBMISSION_FORM_DATA['investigator-1-ethics_commission'] = [
str(EthicsCommission.objects.all()[0].pk)
]
self.office_user, created = get_or_create_user(
'*****@*****.**')
self.office_user.set_password('password')
self.office_user.save()
office_group = Group.objects.get(name='EC-Office')
self.office_user.groups.add(office_group)
profile = self.office_user.profile
profile.is_internal = True
profile.save()
def create_submission_form(ec_number=None, presenter=None):
presenter = presenter or get_or_create_user(
'*****@*****.**')[0]
sub = Submission(ec_number=ec_number,
presenter=presenter,
susar_presenter=presenter)
sub.save()
sform = SubmissionForm.objects.create(
submission=sub,
project_title="High Risk Test Study",
eudract_number="2010-002323-99",
sponsor_name="testsponsor",
sponsor_address="mainstreet 1",
sponsor_zip_code="2323",
sponsor_city="Wien",
sponsor_phone="+4309876543456789",
sponsor_fax="+430987654345678",
sponsor_email="*****@*****.**",
invoice_name="",
invoice_address="",
invoice_zip_code="",
invoice_city="",
invoice_phone="",
invoice_fax="",
invoice_email="",
invoice_uid="",
project_type_non_reg_drug=True,
project_type_reg_drug=False,
project_type_reg_drug_within_indication=False,
project_type_reg_drug_not_within_indication=False,
project_type_medical_method=False,
project_type_medical_device=False,
project_type_medical_device_with_ce=False,
project_type_medical_device_without_ce=False,
project_type_medical_device_performance_evaluation=False,
project_type_basic_research=False,
project_type_genetic_study=False,
project_type_register=False,
project_type_biobank=False,
project_type_retrospective=False,
project_type_questionnaire=False,
project_type_education_context=None,
project_type_misc=None,
specialism="Pädiatrische Onkologie / Immunologie",
pharma_checked_substance="",
pharma_reference_substance="",
medtech_checked_product="",
medtech_reference_substance="",
clinical_phase="III",
already_voted=True,
subject_count=175,
subject_minage=0,
subject_maxage=21,
subject_noncompetents=True,
subject_males=True,
subject_females=True,
subject_childbearing=True,
subject_duration="48 months",
subject_duration_active="12 months",
subject_duration_controls="36 months",
subject_planned_total_duration="99",
substance_preexisting_clinical_tries=True,
substance_p_c_t_phase="III",
substance_p_c_t_period="to long",
substance_p_c_t_application_type="IV in children",
substance_p_c_t_gcp_rules=True,
substance_p_c_t_final_report=True,
medtech_product_name="",
medtech_manufacturer="",
medtech_certified_for_exact_indications=False,
medtech_certified_for_other_indications=False,
medtech_ce_symbol=False,
medtech_manual_included=False,
medtech_technical_safety_regulations="",
medtech_departure_from_regulations="",
insurance_name="Insurance",
insurance_address="insurancestreet 1",
insurance_phone="+43123456",
insurance_contract_number="",
insurance_validity="",
additional_therapy_info="long blabla",
german_project_title="bla bla bla",
german_summary="bla bla bla",
german_preclinical_results="bla bla bla",
german_primary_hypothesis="bla bla bla",
german_inclusion_exclusion_crit="bla bla bla",
german_ethical_info="bla bla bla",
german_protected_subjects_info="bla bla bla",
german_recruitment_info="bla bla bla",
german_consent_info="bla bla bla",
german_risks_info="bla bla bla",
german_benefits_info="bla bla bla",
german_relationship_info="bla bla bla",
german_concurrent_study_info="bla bla bla",
german_sideeffects_info="bla bla bla",
german_statistical_info="bla bla bla",
german_dataprotection_info="bla bla bla",
german_aftercare_info="bla bla bla",
german_payment_info="bla bla bla",
german_abort_info="bla bla bla",
german_dataaccess_info="bla bla bla",
german_financing_info="bla bla bla",
german_additional_info="bla bla bla",
study_plan_blind=0,
study_plan_observer_blinded=False,
study_plan_randomized=True,
study_plan_parallelgroups=True,
study_plan_controlled=True,
study_plan_cross_over=False,
study_plan_placebo=False,
study_plan_factorized=False,
study_plan_pilot_project=False,
study_plan_equivalence_testing=False,
study_plan_misc=None,
study_plan_number_of_groups=
"two sequential randomisations, each with 2 arms",
study_plan_stratification="Age, Stage, National Groups",
study_plan_sample_frequency=None,
study_plan_primary_objectives="Event Free Survival",
study_plan_null_hypothesis=False,
study_plan_alternative_hypothesis="my thesis",
study_plan_secondary_objectives="secondary objective",
study_plan_alpha="0.03",
study_plan_power="0.75",
study_plan_statalgorithm="blabla",
study_plan_multiple_test_correction_algorithm="",
study_plan_dropout_ratio="0",
study_plan_population_intention_to_treat=True,
study_plan_population_per_protocol=False,
study_plan_abort_crit="Peto",
study_plan_planned_statalgorithm="log rank test",
study_plan_dataquality_checking="None",
study_plan_datamanagement="Datamanagement",
study_plan_biometric_planning="Mag. rer.soc.oec. Jane Doe",
study_plan_statistics_implementation=
"Mag. rer.soc.oec. Jane Doe / Statistikerin",
#study_plan_dataprotection_anonalgoritm="Electronically generated unique patient number within SIOPEN-R-Net",
study_plan_dataprotection_anonalgoritm="to long",
study_plan_dataprotection_dvr="",
study_plan_dataprotection_reason="",
submitter_contact_gender="f",
submitter_contact_first_name="Jane",
submitter_contact_title="Univ. Doz. Dr.",
submitter_contact_last_name="Doe",
submitter_organisation="Organisation",
submitter_jobtitle="jobtitle",
submitter_is_coordinator=True,
submitter_is_main_investigator=False,
submitter_is_sponsor=False,
submitter_is_authorized_by_sponsor=False,
substance_registered_in_countries=[],
substance_p_c_t_countries=['AT', 'DE', 'US'],
presenter=presenter,
)
with open(TEST_PDF, 'rb') as f:
attach_document(sform, f, 'protocol.pdf', 'protocol')
ek1 = EthicsCommission(name='EK von Neverland')
ek1.save()
Investigator.objects.create(submission_form=sform,
main=True,
contact_last_name="Univ. Doz. Dr. Joseph doe",
subject_count=1,
ethics_commission=ek1)
sform.render_pdf_document()
return sform
def auth_user_testusers():
''' Test User Creation, target to userswitcher'''
testusers = (
('presenter', None),
('sponsor', None),
('investigator', None),
('office', 'EC-Office'),
('executive', 'EC-Executive'),
('signing', 'EC-Signing'),
('signing_fail', 'EC-Signing'),
('signing_mock', 'EC-Signing'),
('statistic.rev', 'Statistic Reviewer'),
('insurance.rev', 'Insurance Reviewer'),
('external.reviewer', None),
('gcp.reviewer', 'GCP Reviewer'),
('ext.rev', 'External Reviewer'),
)
boardtestusers = (
('b.member1.klph', ('KlPh', )),
('b.member2.radio.klph', (
'Radio',
'KlPh',
)),
('b.member3.anaesth', ('Anästh', )),
('b.member4.chir', ('Chir', )),
('b.member5.nephro', ('Nephro', )),
('b.member6.psychol', ('Psychol', )),
('b.member7.gastro', ('Gastro', )),
('b.member8.neuro', ('Neuro', )),
('b.member9.angio', ('Angio', )),
)
userswitcher_group = Group.objects.get(name='Userswitcher Target')
boardmember_group = Group.objects.get(name='Board Member')
specialist_group = Group.objects.get(name='Specialist')
for testuser, group in testusers:
for number in range(1, 4):
user, created = get_or_create_user('{0}{1}@example.org'.format(
testuser, number))
if group:
group = Group.objects.get(name=group)
user.groups.add(group)
if group.name in ('EC-Executive', 'EC-Office', 'EC-Signing'):
uids = set(user.profile.task_uids)
uids.update(
group.task_types.values_list('workflow_node__uid',
flat=True).distinct())
user.profile.task_uids = list(uids)
user.groups.add(userswitcher_group)
user.profile.is_testuser = True
user.profile.update_flags()
user.profile.save()
for testuser, medcategories in boardtestusers:
user, created = get_or_create_user('{0}@example.org'.format(testuser))
user.groups.add(boardmember_group)
user.groups.add(specialist_group)
user.groups.add(userswitcher_group)
user.profile.is_testuser = True
user.profile.update_flags()
user.profile.save()
for medcategory in medcategories:
m = MedicalCategory.objects.get(abbrev=medcategory)
m.users.add(user)