def runtest(self):
expression = self.test["expression"]
resource = self.resource
model = models[self.test["model"]] if "model" in self.test else None
if "inputfile" in self.test:
if self.test["inputfile"] in resources:
resource = resources[self.test["inputfile"]]
variables = {"resource": resource}
if "context" in self.test:
variables["context"] = evaluate(resource, self.test["context"])[0]
if "variables" in self.test:
variables.update(self.test["variables"])
if "error" in self.test and self.test["error"]:
with pytest.raises(Exception):
evaluate(resource, expression, variables, model)
else:
assert (evaluate(resource, expression, variables,
model) == self.test["result"])
def aidbox_polimorphici_test():
qr = {
"resourceType": "QuestionnaireResponse",
"item": {"linkId": "foo", "answer": {"value": {"Coding": {"code": 1}}}},
}
assert evaluate(qr, "QuestionnaireResponse.item.answer.value.Coding") == [
{"code": 1}
]
def misc_functions_test(resource, path, expected):
# Monkeypatching for Constants.nowDate
tz = datetime.timezone(datetime.timedelta(seconds=10800))
constants.nowDate = datetime.datetime(year=2020,
month=8,
day=20,
hour=17,
minute=52,
second=15,
tzinfo=tz)
assert evaluate(resource, path) == expected
def find_concept_test():
env = {}
env["Source"] = {
"resourceType": "Bundle",
"id": -1,
"entry": [
{
"resource": {
"resourcceType": "ValueSet",
"expansion": {
"contains": [
{
"system": "http://snomed.info/sct",
"code": "16291000122106",
"display": "Ifenprodil",
},
{
"system": "http://snomed.info/sct",
"code": "789067004",
"display": "Amlodipine benzoate",
},
{
"system": "http://snomed.info/sct",
"code": "783132009",
"display": "Bosentan hydrochloride",
},
{
"system": "http://snomed.info/sct",
"code": "766924002",
"display": "Substance with nicotinic receptor antagonist mechanism of action",
},
{
"system": "http://snomed.info/sct",
"code": "708177006",
"display": "Betahistine mesilate (substance)",
},
]
},
}
}
],
}
env["Coding"] = {
"system": "http://snomed.info/sct",
"code": "708177006",
"display": "Betahistine mesilate (substance)",
}
assert evaluate(
{},
"%Source.entry[0].resource.expansion.contains.where(code=%Coding.code)!~{}",
env,
) == [True]
env["Coding"] = (
{
"system": "http://snomed.info/sct",
"code": "428159003",
"display": "Ambrisentan",
},
)
assert evaluate(
{},
"%Source.entry[0].resource.expansion.contains.where(code=%Coding.code)!~{}",
env,
) == [False]
def simple_logic_expressions_test(resource, path, expected):
assert evaluate(resource, path) == expected
def path_functions_test(resource, path, expected):
assert evaluate(resource, path) == expected
def subsetting_functions_test(resource, path, expected):
assert evaluate(resource, path) == expected