def hydroWithInitialCondition(argv):
""" Run hydro using intitial conditions specified in a source folder.
Usage: hydroWithInitialCondition.py direct_init_filename source_folder destination_folder hydro_executable and parameters
"""
initial_dir = "Initial"
# check argument and get directories
if len(argv) < 4:
print(
"Usage: hydroWithInitialCondition.py direct_init_filename source_folder destination_folder hydro_executable and parameters"
)
exit()
else:
direct_init_file = argv[1]
sourceDir = argv[2]
targetDir = argv[3]
current_dir = getcwd()
# get hydro_executable and parameters
executable = " ".join(argv[4:])
# get those initial conditions that already exist
makeDir(targetDir)
files_exist = []
for aDir in ls(targetDir, "dir"):
files_exist = union(
[files_exist,
ls(path.join(targetDir, aDir, initial_dir), "file")])
# the big loop
for init_file in ls(sourceDir, "file"):
# first check if this initial has already be used
if init_file in files_exist:
print("\n********************************\n")
print("Initial file" + " " + init_file + " " +
"already exists; skipping it.")
continue
run("rm ./Initial/*")
print(
"\n=============================================================\n"
)
print("Using" + " " + path.join(sourceDir, init_file) + "...")
copy(path.join(sourceDir, init_file),
path.join(current_dir, initial_dir, init_file))
copy(path.join(sourceDir, init_file),
path.join(current_dir, initial_dir, direct_init_file))
print("python ./record-hydro.py" + " " + targetDir + " " + executable)
run("python ./record-hydro.py" + " " + targetDir + " " + executable)
def hydroWithInitialCondition(argv):
""" Run hydro using intitial conditions specified in a source folder.
Usage: hydroWithInitialCondition.py direct_init_filename source_folder destination_folder hydro_executable and parameters
"""
initial_dir = "Initial";
# check argument and get directories
if len(argv)<4:
print("Usage: hydroWithInitialCondition.py direct_init_filename source_folder destination_folder hydro_executable and parameters");
exit();
else:
direct_init_file=argv[1];
sourceDir=argv[2];
targetDir=argv[3];
current_dir = getcwd();
# get hydro_executable and parameters
executable = " ".join(argv[4:]);
# get those initial conditions that already exist
makeDir(targetDir);
files_exist = [];
for aDir in ls(targetDir, "dir"):
files_exist = union([files_exist, ls(path.join(targetDir, aDir, initial_dir), "file")]);
# the big loop
for init_file in ls(sourceDir, "file"):
# first check if this initial has already be used
if init_file in files_exist:
print("\n********************************\n");
print("Initial file"+" "+init_file+" "+"already exists; skipping it.");
continue;
run("rm ./Initial/*");
print("\n=============================================================\n");
print("Using"+" "+path.join(sourceDir, init_file)+"...");
copy(path.join(sourceDir, init_file), path.join(current_dir, initial_dir, init_file));
copy(path.join(sourceDir, init_file), path.join(current_dir, initial_dir, direct_init_file));
print("python ./record-hydro.py" + " " + targetDir + " " + executable);
run("python ./record-hydro.py" + " " + targetDir + " " + executable);
def record_hydro(argv):
""" Run the commands specified by argv[2:] then copy the generated data files to a uniquely generated directory under argv[1]. """
properEndingString1 = "Early" # if this string is not found, the program must stoped in the middle
properEndingString2 = "Decoupling"
if len(argv) > 1:
# generate necessary strings
unique_signature = "-".join(
argv[2:]) + "--" + strftime("%Y-%m-%d@%H:%M:%S")
# for debug: print unique_signature
store_rel_path = unique_signature
logfile = unique_signature + ".log"
exe_line = " ".join(argv[2:]) + " | tee " + logfile
# clean up first
run("bash ./del.sh")
# execute hydro code (presumably)
print "Executing " + exe_line + "..."
run(exe_line)
# copy data files
tmpfile = open(path.join(getcwd(), logfile))
tmpBuffer = tmpfile.read()
if ((properEndingString1 in tmpBuffer) or
(properEndingString2 in tmpBuffer)): # program normally exited
print("Program quit normally, copy data now.")
# create target directory
store_path = path.join(argv[1], store_rel_path)
store_path = makeDir(store_path, "new")
# get the next available dir
run("bash ./copy-data-hydro.sh" + " " + str(getcwd()) + " " +
store_path)
else:
print("Error in executation.")
# clean up again
run("bash ./del.sh")
else:
print "Usage: record base-dir-path command (with parameters)"
def record_hydro(argv):
""" Run the commands specified by argv[2:] then copy the generated data files to a uniquely generated directory under argv[1]. """
properEndingString1 = "Early" # if this string is not found, the program must stoped in the middle
properEndingString2 = "Decoupling"
if len(argv) > 1:
# generate necessary strings
unique_signature = "-".join(argv[2:])+"--"+strftime("%Y-%m-%d@%H:%M:%S")
# for debug: print unique_signature
store_rel_path = unique_signature
logfile = unique_signature+".log"
exe_line = " ".join(argv[2:])+" | tee "+logfile
# clean up first
run("bash ./del.sh")
# execute hydro code (presumably)
print "Executing " + exe_line + "..."
run(exe_line)
# copy data files
tmpfile = open(path.join(getcwd(), logfile))
tmpBuffer = tmpfile.read()
if ((properEndingString1 in tmpBuffer) or (properEndingString2 in tmpBuffer)): # program normally exited
print("Program quit normally, copy data now.");
# create target directory
store_path = path.join(argv[1],store_rel_path);
store_path = makeDir(store_path, "new"); # get the next available dir
run("bash ./copy-data-hydro.sh"+" "+str(getcwd())+" "+store_path)
else:
print("Error in executation.")
# clean up again
run("bash ./del.sh")
else:
print "Usage: record base-dir-path command (with parameters)"