from indigo_inchi import IndigoInchi
from indigo_renderer import IndigoRenderer
from .common.util import highlight
from .validation import IndigoRendererSchema, IndigoRequestSchema, IndigoAutomapSchema, IndigoCheckSchema, IndigoCalculateSchema
from math import sqrt
from threading import local
import base64
import config
tls = local()
indigo_api = Blueprint('indigo_api', __name__)
indigo_api.indigo_defaults = {
'ignore-stereochemistry-errors': 'true',
'smart-layout': 'true',
'gross-formula-add-rsites': 'true',
'mass-skip-error-on-pseudoatoms': 'false',
}
indigo_api_logger = logging.getLogger('indigo')
LOG_MAX_SYMBOLS = 50
def get_shorten_text(intext):
if len(intext) < LOG_MAX_SYMBOLS:
return intext
return "{} ...".format(intext.strip().ljust(LOG_MAX_SYMBOLS)[:LOG_MAX_SYMBOLS])
def LOG_DATA(*args):
format_shorten = []
