emit(doc.shared_with, doc._id)
};
}
''')
from flask import current_app as app
app = Flask(__name__)
app.config.update(COUCHDB_SERVER='http://*****:*****@app_txl_cloud.route('/editor')
def txl_index():
return render_template('quick_txl.html')
@app_txl_cloud.route('/txl', methods=['POST'])
def txl():
# getting the txl and the input file to parse
txl_source = request.form['txl_source']
input_to_parse = request.form['input_to_parse']
};
}
''')
from flask import current_app as app
app = Flask(__name__)
app.config.update(COUCHDB_SERVER='http://*****:*****@app_code_clone.route('/cloneCognition')
def cloneCognition():
return render_template('index_cloneValidationFramework.html')
@app_code_clone.route('/app_code_clone_request_user_access')
''')
views_by_workflow_locking_module = ViewDefinition('hello', 'workflow_locking_module', '''
function (doc) {
if (doc.doc_type && doc.doc_type == 'workflow_locking_module') {
emit(doc.workflow_id, doc._id)
};
}
''')
manager = CouchDBManager()
manager.setup(app)
manager.add_viewdef([views_by_user, views_by_non_validated_clones, views_by_pipeline_module, views_by_email, views_by_saved_pipeline, views_by_workflow_locking_turn, views_by_workflow_locking_module])
manager.sync(app)
tasks = [
{
'id': 1,
'title': u'Buy groceries',
'description': u'Milk, Cheese, Pizza, Fruit, Tylenol',
'done': False
},
{
'id': 2,
'title': u'Learn Python',
'description': u'Need to find a good Python tutorial on the web',
emit(doc.author, doc._id)
};
}
''')
from flask import current_app as app
app = Flask(__name__)
app.config.update(COUCHDB_SERVER='http://*****:*****@app_collaborative_sci_workflow.route('/collaborative_workflow')
def collaborative_workflow():
return render_template('collaborative_workflow.html')
#---------------------------------------------------------------------------------------
# MAIN CODES
#---------------------------------------------------------------------------------------
############ BIO STARTS #############################
import pandas
#!/usr/bin/env python
# -*- coding: utf-8 -*-
from flaskext.couchdb import CouchDBManager, ViewDefinition
manager = CouchDBManager() # auto_sync=False
all_users_view = ViewDefinition('users', 'all', '''\
function (doc) {
if (doc.type == 'user') {
emit(doc.openid, null)
};
}''')
all_text_view = ViewDefinition('text', 'all', '''\
function (doc) {
if (doc.type != 'user') {
emit(doc.date, {title:doc.title, content: doc.content, user:
doc.user})
};
}''')
manager.add_viewdef((all_users_view, all_text_view))
from GetTaskIDs import GetTaskIDs
from couchdb import Server
import requests
import uuid
#prepare app to be a flask based application
#Enable cors on the app
#set up couch DB manager to enable communication from API to DB
app = Flask(__name__)
cors = CORS(app, resources={r"/todo_list/*": {"origins": "*"}})
manager = CouchDBManager()
manager.setup(app)
#Add user_tasks_view to manager's list of views
manager.add_viewdef(user_tasks_view)
#Route to return all currently store tasks in the DB
@app.route('/todo_list/getAllViews', methods=['GET'])
@cross_origin()
def getAllTasks():
#runs user_tasks_view and returns resulting IDs to docIDs
docIDs = GetTaskIDs(user_tasks_view)
documents = []
#for ever ID locate the doc in DB and append to documents array
for ids in docIDs:
documents.append(g.couch[ids])
return jsonify(documents)
}
''')
views_by_non_validated_clones = ViewDefinition('hello', 'my_non_validated_clones', '''
function (doc) {
if (doc.is_clone_doc == 'yes' && doc.is_validated_by_any_user == 'no') {
emit(doc._id, doc)
};
}
''')
# userInfo & uplaod imgs database
manager = CouchDBManager()
manager.setup(app)
manager.add_viewdef([views_by_source, views_by_user, views_by_Lsysmodel, views_by_non_validated_clones])
manager.sync(app)
# imgs search database
search_obj = imgSearch()
imgId = []
idseq = 0
def image_source(selectedSource):
sources = []
for row in views_by_source(g.couch):
sources.append(row.key)
sources = list(set(sources))
sources.sort()
if selectedSource in sources:
