def testSearchExpressionLevels(self):
request = protocol.SearchExpressionLevelsRequest()
request.rna_quantification_id = self.rnaQuantificationId
request.threshold = self.threshold
request.page_size = self.pageSize
self.httpClient.search_expression_levels(self.rnaQuantificationId,
threshold=self.threshold)
self.httpClient._run_search_request.assert_called_once_with(
request, "expressionlevels",
protocol.SearchExpressionLevelsResponse)
def search_expression_levels(self,
rna_quantification_id="",
names=[],
threshold=0.0):
"""
Returns an iterator over the ExpressionLevel objects from the server
:param str feature_ids: The IDs of the
:class:`ga4gh.protocol.Feature` of interest.
:param str rna_quantification_id: The ID of the
:class:`ga4gh.protocol.RnaQuantification` of interest.
:param float threshold: Minimum expression of responses to return.
"""
request = protocol.SearchExpressionLevelsRequest()
request.rna_quantification_id = rna_quantification_id
request.names.extend(names)
request.threshold = threshold
request.page_size = pb.int(self._page_size)
return self._run_search_request(
request, "expressionlevels",
protocol.SearchExpressionLevelsResponse)
def sendExpressionLevelsSearch(self):
request = protocol.SearchExpressionLevelsRequest()
request.rna_quantification_id = self.rnaQuantificationId
return self.sendPostRequest('/expressionlevels/search', request)