def get_percentage_value(rst, value, includeNodata=None):
"""
Return the % of cells with a certain value
"""
import numpy
from osgeo import gdal
from gasp.pyt.num import count_where
from gasp.gt.fmrst import rst_to_array
from gasp.gt.prop.rst import get_nodata
array = rst_to_array(rst)
lnh, col = array.shape
nrcell = lnh * col
if not includeNodata:
nd = get_nodata(rst, gisApi='gdal')
nd_cells = count_where(array, array == nd)
nrcell = nrcell - nd_cells
valCount = count_where(array, array == value)
perc = (valCount / float(nrcell)) * 100
return perc
def rst_shape(rst, gisApi='gdal'):
"""
Return number of lines and columns in a raster
API'S Available:
* gdal;
* arcpy;
"""
from gasp.pyt import obj_to_lst
rst = obj_to_lst(rst)
shapes = {}
if gisApi == 'gdal':
from gasp.gt.fmrst import rst_to_array
for r in rst:
array = rst_to_array(r)
lnh, cols = array.shape
shapes[r] = [lnh, cols]
del array
else:
raise ValueError('The api {} is not available'.format(gisApi))
return shapes if len(rst) > 1 else shapes[rst[0]]
def speraman_correlation(x, y):
"""
Speraman correlation between two raster images
The images have to have the same reading order and the same size
Is wise exclude the nodata values
"""
from scipy import stats
from gasp.gt.fmrst import rst_to_array
vx = rst_to_array(x, flatten=True, with_nodata=False)
vy = rst_to_array(y, flatten=True, with_nodata=False)
coef = stats.spearmanr(vx, vy, axis=0)
return coef[0]
def pearson_correlation(x, y):
"""
Pearson correlation between two raster images
The images have to have the same reading order and the same size
Is wise exclude the nodata values
"""
import numpy
from gasp.gt.fmrst import rst_to_array
vx = rst_to_array(x, flatten=True, with_nodata=False)
vy = rst_to_array(y, flatten=True, with_nodata=False)
cof = numpy.corrcoef(vx, vy)[0, 1]
return cof
def rst_distinct(rst):
"""
Export a list with the values of a raster
API'S Available:
* gdal;
"""
import numpy
from gasp.gt.fmrst import rst_to_array
v = numpy.unique(rst_to_array(rst, flatten=True, with_nodata=False))
return list(v)
def count_cells(raster, countNodata=None):
"""
Return number of cells in a Raster Dataset
"""
from gasp.gt.fmrst import rst_to_array
from gasp.pyt.num import count_where
a = rst_to_array(raster)
lnh, col = a.shape
nrcell = lnh * col
if countNodata:
return nrcell
else:
NoDataValue = get_nodata(raster)
NrNodata = count_where(a, a == NoDataValue)
return nrcell - NrNodata
def percentage_nodata(rst):
"""
Return the % of cells with nodata value
"""
import numpy
from gasp.pyt.num import count_where
from gasp.gt.fmrst import rst_to_array
from gasp.gt.prop.rst import get_nodata
array = rst_to_array(rst)
lnh, col = array.shape
nrcell = lnh * col
nd = get_nodata(rst, gisApi='gdal')
nd_cells = count_where(array, array == nd)
perc = (nd_cells / float(nrcell)) * 100
return perc
def comp_bnds(rsts, outRst):
"""
Composite Bands
"""
from osgeo import gdal, gdal_array
from gasp.gt.fmrst import rst_to_array
from gasp.gt.prop.ff import drv_name
from gasp.gt.prop.rst import get_nodata
from gasp.gt.prop.prj import get_rst_epsg, epsg_to_wkt
# Get Arrays
_as = [rst_to_array(r) for r in rsts]
# Get nodata values
nds = [get_nodata(r) for r in rsts]
# Assume that first raster is the template
img_temp = gdal.Open(rsts[0])
geo_tran = img_temp.GetGeoTransform()
band = img_temp.GetRasterBand(1)
dataType = gdal_array.NumericTypeCodeToGDALTypeCode(_as[0].dtype)
rows, cols = _as[0].shape
epsg = get_rst_epsg(rsts[0])
# Create Output
drv = gdal.GetDriverByName(drv_name(outRst))
out = drv.Create(outRst, cols, rows, len(_as), dataType)
out.SetGeoTransform(geo_tran)
out.SetProjection(epsg_to_wkt(epsg))
# Write all bands
for i in range(len(_as)):
outBand = out.GetRasterBand(i + 1)
outBand.SetNoDataValue(nds[i])
outBand.WriteArray(_as[i])
outBand.FlushCache()
return outRst
def rst_rotation(inFolder, template, outFolder, img_format='.tif'):
"""
Invert raster data
"""
import os
from osgeo import gdal
from gasp.pyt.oss import lst_ff
from gasp.gt.fmrst import rst_to_array
from gasp.gt.prop.rst import get_nodata
from gasp.gt.torst import obj_to_rst
rasters = lst_ff(inFolder, file_format=img_format)
for rst in rasters:
a = rst_to_array(rst)
nd = get_nodata(rst)
obj_to_rst(a[::-1],
os.path.join(outFolder, os.path.basename(rst)),
template,
noData=nd)
def osm2lulc(osmdata, nomenclature, refRaster, lulcRst,
overwrite=None, dataStore=None, roadsAPI='POSTGIS'):
"""
Convert OSM data into Land Use/Land Cover Information
A matrix based approach
roadsAPI Options:
* SQLITE
* POSTGIS
"""
# ************************************************************************ #
# Python Modules from Reference Packages #
# ************************************************************************ #
import os; import numpy; import datetime
from threading import Thread
from osgeo import gdal
# ************************************************************************ #
# Dependencies #
# ************************************************************************ #
from gasp.gt.fmrst import rst_to_array
from gasp.gt.prop.ff import check_isRaster
from gasp.gt.prop.rst import get_cellsize
from gasp.gt.prop.prj import get_rst_epsg
from gasp.pyt.oss import mkdir, copy_file
from gasp.pyt.oss import fprop
if roadsAPI == 'POSTGIS':
from gasp.sql.db import create_db
from gasp.gql.to.osm import osm_to_psql
from gasp.sds.osm2lulc.mod2 import pg_num_roads
from gasp.sql.fm import dump_db
from gasp.sql.db import drop_db
else:
from gasp.gt.toshp.osm import osm_to_sqdb
from gasp.sds.osm2lulc.mod2 import num_roads
from gasp.sds.osm2lulc.utils import osm_project, add_lulc_to_osmfeat
from gasp.sds.osm2lulc.utils import osmlulc_rsttbl
from gasp.sds.osm2lulc.utils import get_ref_raster
from gasp.sds.osm2lulc.mod1 import num_selection
from gasp.sds.osm2lulc.m3_4 import num_selbyarea
from gasp.sds.osm2lulc.mod5 import num_base_buffer
from gasp.sds.osm2lulc.mod6 import num_assign_builds
from gasp.gt.torst import obj_to_rst
# ************************************************************************ #
# Global Settings #
# ************************************************************************ #
# Check if input parameters exists!
if not os.path.exists(os.path.dirname(lulcRst)):
raise ValueError('{} does not exist!'.format(os.path.dirname(lulcRst)))
if not os.path.exists(osmdata):
raise ValueError('File with OSM DATA ({}) does not exist!'.format(osmdata))
if not os.path.exists(refRaster):
raise ValueError('File with reference area ({}) does not exist!'.format(refRaster))
# Check if Nomenclature is valid
nomenclature = "URBAN_ATLAS" if nomenclature != "URBAN_ATLAS" and \
nomenclature != "CORINE_LAND_COVER" and \
nomenclature == "GLOBE_LAND_30" else nomenclature
time_a = datetime.datetime.now().replace(microsecond=0)
workspace = os.path.join(os.path.dirname(
lulcRst), 'num_osmto') if not dataStore else dataStore
# Check if workspace exists:
if os.path.exists(workspace):
if overwrite:
mkdir(workspace, overwrite=True)
else:
raise ValueError('Path {} already exists'.format(workspace))
else:
mkdir(workspace, overwrite=None)
# Get Ref Raster and EPSG
refRaster, epsg = get_ref_raster(refRaster, workspace, cellsize=2)
CELLSIZE = get_cellsize(refRaster, gisApi='gdal')
from gasp.sds.osm2lulc import osmTableData, PRIORITIES
time_b = datetime.datetime.now().replace(microsecond=0)
# ************************************************************************ #
# Convert OSM file to SQLITE DB or to POSTGIS DB #
# ************************************************************************ #
if roadsAPI == 'POSTGIS':
osm_db = create_db(fprop(
osmdata, 'fn', forceLower=True), overwrite=True)
osm_db = osm_to_psql(osmdata, osm_db)
else:
osm_db = osm_to_sqdb(osmdata, os.path.join(workspace, 'osm.sqlite'))
time_c = datetime.datetime.now().replace(microsecond=0)
# ************************************************************************ #
# Add Lulc Classes to OSM_FEATURES by rule #
# ************************************************************************ #
add_lulc_to_osmfeat(osm_db, osmTableData, nomenclature, api=roadsAPI)
time_d = datetime.datetime.now().replace(microsecond=0)
# ************************************************************************ #
# Transform SRS of OSM Data #
# ************************************************************************ #
osmTableData = osm_project(
osm_db, epsg, api=roadsAPI,
isGlobeLand=None if nomenclature != "GLOBE_LAND_30" else True
)
time_e = datetime.datetime.now().replace(microsecond=0)
# ************************************************************************ #
# MapResults #
# ************************************************************************ #
mergeOut = {}
timeCheck = {}
RULES = [1, 2, 3, 4, 5, 7]
def run_rule(ruleID):
time_start = datetime.datetime.now().replace(microsecond=0)
_osmdb = copy_file(
osm_db, os.path.splitext(osm_db)[0] + '_r{}.sqlite'.format(ruleID)
) if roadsAPI == 'SQLITE' else None
# ******************************************************************** #
# 1 - Selection Rule #
# ******************************************************************** #
if ruleID == 1:
res, tm = num_selection(
_osmdb if _osmdb else osm_db, osmTableData['polygons'], workspace,
CELLSIZE, epsg, refRaster, api=roadsAPI
)
# ******************************************************************** #
# 2 - Get Information About Roads Location #
# ******************************************************************** #
elif ruleID == 2:
res, tm = num_roads(
_osmdb, nomenclature, osmTableData['lines'],
osmTableData['polygons'], workspace, CELLSIZE, epsg,
refRaster
) if _osmdb else pg_num_roads(
osm_db, nomenclature,
osmTableData['lines'], osmTableData['polygons'],
workspace, CELLSIZE, epsg, refRaster
)
# ******************************************************************** #
# 3 - Area Upper than #
# ******************************************************************** #
elif ruleID == 3:
if nomenclature != "GLOBE_LAND_30":
res, tm = num_selbyarea(
osm_db if not _osmdb else _osmdb,
osmTableData['polygons'], workspace,
CELLSIZE, epsg, refRaster, UPPER=True, api=roadsAPI
)
else:
return
# ******************************************************************** #
# 4 - Area Lower than #
# ******************************************************************** #
elif ruleID == 4:
if nomenclature != "GLOBE_LAND_30":
res, tm = num_selbyarea(
osm_db if not _osmdb else _osmdb,
osmTableData['polygons'], workspace,
CELLSIZE, epsg, refRaster, UPPER=False, api=roadsAPI
)
else:
return
# ******************************************************************** #
# 5 - Get data from lines table (railway | waterway) #
# ******************************************************************** #
elif ruleID == 5:
res, tm = num_base_buffer(
osm_db if not _osmdb else _osmdb,
osmTableData['lines'], workspace,
CELLSIZE, epsg, refRaster, api=roadsAPI
)
# ******************************************************************** #
# 7 - Assign untagged Buildings to tags #
# ******************************************************************** #
elif ruleID == 7:
if nomenclature != "GLOBE_LAND_30":
res, tm = num_assign_builds(
osm_db if not _osmdb else _osmdb,
osmTableData['points'], osmTableData['polygons'],
workspace, CELLSIZE, epsg, refRaster, apidb=roadsAPI
)
else:
return
time_end = datetime.datetime.now().replace(microsecond=0)
mergeOut[ruleID] = res
timeCheck[ruleID] = {'total': time_end - time_start, 'detailed': tm}
thrds = []
for r in RULES:
thrds.append(Thread(
name="to_{}".format(str(r)), target=run_rule,
args=(r,)
))
for t in thrds: t.start()
for t in thrds: t.join()
# Merge all results into one Raster
compileResults = {}
for rule in mergeOut:
for cls in mergeOut[rule]:
if cls not in compileResults:
if type(mergeOut[rule][cls]) == list:
compileResults[cls] = mergeOut[rule][cls]
else:
compileResults[cls] = [mergeOut[rule][cls]]
else:
if type(mergeOut[rule][cls]) == list:
compileResults[cls] += mergeOut[rule][cls]
else:
compileResults[cls].append(mergeOut[rule][cls])
time_m = datetime.datetime.now().replace(microsecond=0)
# All Rasters to Array
arrayRst = {}
for cls in compileResults:
for raster in compileResults[cls]:
if not raster:
continue
array = rst_to_array(raster)
if cls not in arrayRst:
arrayRst[cls] = [array.astype(numpy.uint8)]
else:
arrayRst[cls].append(array.astype(numpy.uint8))
time_n = datetime.datetime.now().replace(microsecond=0)
# Sum Rasters of each class
for cls in arrayRst:
if len(arrayRst[cls]) == 1:
sumArray = arrayRst[cls][0]
else:
sumArray = arrayRst[cls][0]
for i in range(1, len(arrayRst[cls])):
sumArray = sumArray + arrayRst[cls][i]
arrayRst[cls] = sumArray
time_o = datetime.datetime.now().replace(microsecond=0)
# Apply priority rule
__priorities = PRIORITIES[nomenclature + "_NUMPY"]
for lulcCls in __priorities:
__lulcCls = rstcls_map(lulcCls)
if __lulcCls not in arrayRst:
continue
else:
numpy.place(arrayRst[__lulcCls], arrayRst[__lulcCls] > 0,
lulcCls
)
for i in range(len(__priorities)):
lulc_i = rstcls_map(__priorities[i])
if lulc_i not in arrayRst:
continue
else:
for e in range(i+1, len(__priorities)):
lulc_e = rstcls_map(__priorities[e])
if lulc_e not in arrayRst:
continue
else:
numpy.place(arrayRst[lulc_e],
arrayRst[lulc_i] == __priorities[i], 0
)
time_p = datetime.datetime.now().replace(microsecond=0)
# Merge all rasters
startCls = 'None'
for i in range(len(__priorities)):
lulc_i = rstcls_map(__priorities[i])
if lulc_i in arrayRst:
resultSum = arrayRst[lulc_i]
startCls = i
break
if startCls == 'None':
return 'NoResults'
for i in range(startCls + 1, len(__priorities)):
lulc_i = rstcls_map(__priorities[i])
if lulc_i not in arrayRst:
continue
resultSum = resultSum + arrayRst[lulc_i]
# Save Result
outIsRst = check_isRaster(lulcRst)
if not outIsRst:
from gasp.pyt.oss import fprop
lulcRst = os.path.join(
os.path.dirname(lulcRst), fprop(lulcRst, 'fn') + '.tif'
)
numpy.place(resultSum, resultSum==0, 1)
obj_to_rst(resultSum, lulcRst, refRaster, noData=1)
osmlulc_rsttbl(nomenclature + "_NUMPY", os.path.join(
os.path.dirname(lulcRst), os.path.basename(lulcRst) + '.vat.dbf'
))
time_q = datetime.datetime.now().replace(microsecond=0)
# Dump Database if PostGIS was used
# Drop Database if PostGIS was used
if roadsAPI == 'POSTGIS':
dump_db(osm_db, os.path.join(workspace, osm_db + '.sql'), api='psql')
drop_db(osm_db)
return lulcRst, {
0 : ('set_settings', time_b - time_a),
1 : ('osm_to_sqdb', time_c - time_b),
2 : ('cls_in_sqdb', time_d - time_c),
3 : ('proj_data', time_e - time_d),
4 : ('rule_1', timeCheck[1]['total'], timeCheck[1]['detailed']),
5 : ('rule_2', timeCheck[2]['total'], timeCheck[2]['detailed']),
6 : None if 3 not in timeCheck else (
'rule_3', timeCheck[3]['total'], timeCheck[3]['detailed']),
7 : None if 4 not in timeCheck else (
'rule_4', timeCheck[4]['total'], timeCheck[4]['detailed']),
8 : ('rule_5', timeCheck[5]['total'], timeCheck[5]['detailed']),
9 : None if 7 not in timeCheck else (
'rule_7', timeCheck[7]['total'], timeCheck[7]['detailed']),
10 : ('rst_to_array', time_n - time_m),
11 : ('sum_cls', time_o - time_n),
12 : ('priority_rule', time_p - time_o),
13 : ('merge_rst', time_q - time_p)
}
def update_globe_land_cover(original_globe_raster, osm_urban_atlas_raster,
osm_globe_raster, epsg, updated_globe_raster,
detailed_globe_raster):
"""
Update the original Glob Land 30 with the result of the conversion of
OSM DATA to the Globe Land Cover nomenclature;
Also updates he previous updated Glob Land 30 with the result of the
conversion of osm data to the Urban Atlas Nomenclature
"""
import os
import numpy as np
from gasp.gt.fmrst import rst_to_array
from gasp.gt.prop.rst import get_cellsize, get_nodata
from gasp.gt.torst import obj_to_rst
# ############################# #
# Convert images to numpy array #
# ############################# #
np_globe_original = rst_to_array(original_globe_raster)
np_globe_osm = rst_to_array(osm_globe_raster)
np_ua_osm = rst_to_array(osm_urban_atlas_raster)
# ################################## #
# Check the dimension of both images #
# ################################## #
if np_globe_original.shape != np_globe_osm.shape:
return (
'The Globe Land 30 raster (original) do not have the same number'
' of columns/lines comparing with the Globe Land 30 derived '
'from OSM data')
elif np_globe_original.shape != np_ua_osm.shape:
return (
'The Globe Land 30 raster (original) do not have the same '
'number of columns/lines comparing with the Urban Atlas raster '
'derived from OSM data')
elif np_globe_osm.shape != np_ua_osm.shape:
return (
'The Globe Land 30 derived from OSM data do not have the same '
'number of columns/lines comparing with the Urban Atlas raster '
'derived from OSM data')
# ############## #
# Check Cellsize #
# ############## #
cell_of_rsts = get_cellsize(
[original_globe_raster, osm_globe_raster, osm_urban_atlas_raster],
xy=True,
gisApi='gdal')
cell_globe_original = cell_of_rsts[original_globe_raster]
cell_globe_osm = cell_of_rsts[osm_globe_raster]
cell_ua_osm = cell_of_rsts[osm_urban_atlas_raster]
if cell_globe_original != cell_globe_osm:
return (
'The cellsize of the Globe Land 30 raster (original) is not the '
'same comparing with the Globe Land 30 derived from OSM data')
elif cell_globe_original != cell_ua_osm:
return (
'The cellsize of the Globe Land 30 raster (original) is not the '
'same comparing with the Urban Atlas raster derived from OSM data')
elif cell_ua_osm != cell_globe_osm:
return (
'The cellsize of the Globe Land 30 derived from OSM data is not '
'the same comparing with the Urban Atlas raster derived from '
'OSM data')
# ############################# #
# Get the Value of Nodata Cells #
# ############################# #
nodata_glob_original = get_nodata(original_globe_raster, gisApi='gdal')
nodata_glob_osm = get_nodata(osm_globe_raster, gisApi='gdal')
nodata_ua_osm = get_nodata(osm_urban_atlas_raster, gisApi='gdal')
# ######################################## #
# Create a new map - Globe Land 30 Updated #
# ######################################## #
"""
Create a new array with zeros...
1) The zeros will be replaced by the values in the Globe Land derived from
OSM.
2) The zeros will be replaced by the values in the Original Globe Land at
the cells with NULL data in the Globe Land derived from OSM.
The meta array will identify values origins in the updated raster:
1 - Orinal Raster
2 - OSM Derived Raster
"""
update_array = np.zeros(
(np_globe_original.shape[0], np_globe_original.shape[1]))
update_meta_array = np.zeros(
(np_globe_original.shape[0], np_globe_original.shape[1]))
# 1)
np.copyto(update_array, np_globe_osm, 'no',
np_globe_osm != nodata_glob_osm)
# 1) meta
np.place(update_meta_array, update_array != 0, 2)
# 2) meta
np.place(update_meta_array, update_array == 0, 1)
# 2)
np.copyto(update_array, np_globe_original, 'no', update_array == 0)
# 2) meta
np.place(update_meta_array, update_array == nodata_glob_original,
int(nodata_glob_original))
# noData to int
np.place(update_array, update_array == nodata_glob_original,
int(nodata_glob_original))
updated_meta = os.path.join(
os.path.dirname(updated_globe_raster), '{n}_meta{e}'.format(
n=os.path.splitext(os.path.basename(updated_globe_raster))[0],
e=os.path.splitext(os.path.basename(updated_globe_raster))[1]))
# Create Updated Globe Cover 30
obj_to_rst(update_array,
updated_globe_raster,
original_globe_raster,
noData=int(nodata_glob_original))
# Create Updated Globe Cover 30 meta
obj_to_rst(update_meta_array,
updated_meta,
original_globe_raster,
noData=int(nodata_glob_original))
# ################################################# #
# Create a new map - Globe Land 30 Detailed with UA #
# ################################################# #
np_update = rst_to_array(updated_globe_raster)
detailed_array = np.zeros((np_update.shape[0], np_update.shape[1]))
detailed_meta_array = np.zeros((np_update.shape[0], np_update.shape[1]))
"""
Replace 80 Globe Land for 11, 12, 13, 14 of Urban Atlas
The meta array will identify values origins in the detailed raster:
1 - Updated Raster
2 - UA Derived Raster from OSM
"""
# Globe - Mantain some classes
np.place(detailed_array, np_update == 30, 8)
np.place(detailed_array, np_update == 30, 1)
np.place(detailed_array, np_update == 40, 9)
np.place(detailed_array, np_update == 40, 1)
np.place(detailed_array, np_update == 50, 10)
np.place(detailed_array, np_update == 50, 1)
np.place(detailed_array, np_update == 10, 5)
np.place(detailed_array, np_update == 10, 1)
# Water bodies
np.place(detailed_array, np_ua_osm == 50 or np_update == 60, 7)
np.place(detailed_meta_array, np_ua_osm == 50 or np_update == 60, 1)
# Urban - Where Urban Atlas IS NOT NULL
np.place(detailed_array, np_ua_osm == 11, 1)
np.place(detailed_meta_array, np_ua_osm == 11, 2)
np.place(detailed_array, np_ua_osm == 12, 2)
np.place(detailed_meta_array, np_ua_osm == 12, 2)
np.place(detailed_array, np_ua_osm == 13, 3)
np.place(detailed_meta_array, np_ua_osm == 13, 2)
np.place(detailed_array, np_ua_osm == 14, 4)
np.place(detailed_meta_array, np_ua_osm == 14, 2)
# Urban Atlas - Class 30 to 6
np.place(detailed_array, np_ua_osm == 30, 6)
np.place(detailed_meta_array, np_ua_osm == 30, 2)
# Create Detailed Globe Cover 30
obj_to_rst(detailed_array,
detailed_globe_raster,
original_globe_raster,
noData=0)
# Create Detailed Globe Cover 30 meta
detailed_meta = os.path.join(
os.path.dirname(detailed_globe_raster), '{n}_meta{e}'.format(
n=os.path.splitext(os.path.basename(detailed_meta))[0],
e=os.path.splitext(os.path.basename(detailed_meta))[1]))
obj_to_rst(detailed_meta_array,
detailed_meta,
original_globe_raster,
noData=0)
def num_roads(osmdata, nom, lineTbl, polyTbl, folder, cellsize, srs, rstTemplate):
"""
Select Roads and convert To Raster
"""
import datetime; import os
import numpy as np
from osgeo import gdal
from threading import Thread
from gasp.gt.fmrst import rst_to_array
from gasp.gt.attr import sel_by_attr
from gasp.gql.prox import splite_buffer
from gasp.gt.torst import shp_to_rst, obj_to_rst
from gasp.sql.i import row_num
time_a = datetime.datetime.now().replace(microsecond=0)
NR = row_num(osmdata, lineTbl, where="roads IS NOT NULL", api='sqlite')
time_b = datetime.datetime.now().replace(microsecond=0)
if not NR: return None, {0 : ('count_rows_roads', time_b - time_a)}
timeGasto = {0 : ('count_rows_roads', time_b - time_a)}
# Get Roads Buffer
LULC_CLS = '1221' if nom != "GLOBE_LAND_30" else '801'
bfShps = []
def exportAndBuffer():
time_cc = datetime.datetime.now().replace(microsecond=0)
roadFile = splite_buffer(
osmdata, lineTbl, "bf_roads", "geometry",
os.path.join(folder, 'bf_roads.gml'),
whrClause="roads IS NOT NULL",
outTblIsFile=True, dissolve=None
)
time_c = datetime.datetime.now().replace(microsecond=0)
distRst = shp_to_rst(
roadFile, None, cellsize, -1,
os.path.join(folder, 'rst_roads.tif'),
epsg=srs, rst_template=rstTemplate, api="gdal"
)
time_d = datetime.datetime.now().replace(microsecond=0)
bfShps.append(distRst)
timeGasto[1] = ('buffer_roads', time_c - time_cc)
timeGasto[2] = ('to_rst_roads', time_d - time_c)
BUILDINGS = []
def exportBuild():
time_ee = datetime.datetime.now().replace(microsecond=0)
NB = row_num(
osmdata, polyTbl, where="building IS NOT NULL", api='sqlite'
)
time_e = datetime.datetime.now().replace(microsecond=0)
timeGasto[3] = ('check_builds', time_e - time_ee)
if not NB:
return
bShp = sel_by_attr(
osmdata,
"SELECT geometry FROM {} WHERE building IS NOT NULL".format(
polyTbl
),
os.path.join(folder, 'road_builds.shp'),
api_gis='ogr'
)
time_f = datetime.datetime.now().replace(microsecond=0)
bRst = shp_to_rst(
bShp, None, cellsize, -1,
os.path.join(folder, 'road_builds.tif'),
epsg=srs, rst_template=rstTemplate, api='gdal'
)
time_g = datetime.datetime.now().replace(microsecond=0)
BUILDINGS.append(bRst)
timeGasto[4] = ('export_builds', time_f - time_e)
timeGasto[5] = ('builds_to_rst', time_g - time_f)
thrds = [
Thread(name="build-th", target=exportBuild),
Thread(name='roads-th', target=exportAndBuffer)
]
for t in thrds: t.start()
for t in thrds: t.join()
if not len(BUILDINGS):
return {LULC_CLS : bfShps[0]}
time_x = datetime.datetime.now().replace(microsecond=0)
BUILD_ARRAY = rst_to_array(BUILDINGS[0], with_nodata=True)
rst_array = rst_to_array(bfShps[0], with_nodata=True)
np.place(rst_array, BUILD_ARRAY==1, 0)
newRaster = obj_to_rst(
rst_array, os.path.join(folder, 'fin_roads.tif'),
rstTemplate, noData=-1
)
time_z = datetime.datetime.now().replace(microsecond=0)
timeGasto[6] = ('sanitize_roads', time_z - time_x)
return {int(LULC_CLS) : newRaster}, timeGasto
def shp_to_rst(shp,
inSource,
cellsize,
nodata,
outRaster,
epsg=None,
rst_template=None,
snapRst=None,
api='gdal'):
"""
Feature Class to Raster
cellsize will be ignored if rst_template is defined
* API's Available:
- gdal;
- pygrass;
- grass;
"""
if api == 'gdal':
from osgeo import gdal, ogr
from gasp.gt.prop.ff import drv_name
if not epsg:
from gasp.gt.prop.prj import get_shp_sref
srs = get_shp_sref(shp).ExportToWkt()
else:
from gasp.gt.prop.prj import epsg_to_wkt
srs = epsg_to_wkt(epsg)
# Get Extent
dtShp = ogr.GetDriverByName(drv_name(shp)).Open(shp, 0)
lyr = dtShp.GetLayer()
if not rst_template:
if not snapRst:
x_min, x_max, y_min, y_max = lyr.GetExtent()
x_res = int((x_max - x_min) / cellsize)
y_res = int((y_max - y_min) / cellsize)
else:
from gasp.gt.prop.rst import adjust_ext_to_snap
x_min, y_max, y_res, x_res, cellsize = adjust_ext_to_snap(
shp, snapRst)
else:
from gasp.gt.fmrst import rst_to_array
img_temp = gdal.Open(rst_template)
geo_transform = img_temp.GetGeoTransform()
y_res, x_res = rst_to_array(rst_template).shape
# Create output
dtRst = gdal.GetDriverByName(drv_name(outRaster)).Create(
outRaster, x_res, y_res, gdal.GDT_Byte)
if not rst_template:
dtRst.SetGeoTransform((x_min, cellsize, 0, y_max, 0, -cellsize))
else:
dtRst.SetGeoTransform(geo_transform)
dtRst.SetProjection(str(srs))
bnd = dtRst.GetRasterBand(1)
bnd.SetNoDataValue(nodata)
gdal.RasterizeLayer(dtRst, [1], lyr, burn_values=[1])
del lyr
dtShp.Destroy()
elif api == 'grass' or api == 'pygrass':
"""
Vectorial geometry to raster
If source is None, the convertion will be based on the cat field.
If source is a string, the convertion will be based on the field
with a name equal to the given string.
If source is a numeric value, all cells of the output raster will have
that same value.
"""
__USE = "cat" if not inSource else "attr" if type(inSource) == str \
else "val" if type(inSource) == int or \
type(inSource) == float else None
if not __USE:
raise ValueError('\'source\' parameter value is not valid')
if api == 'pygrass':
from grass.pygrass.modules import Module
m = Module("v.to.rast",
input=shp,
output=outRaster,
use=__USE,
attribute_column=inSource if __USE == "attr" else None,
value=inSource if __USE == "val" else None,
overwrite=True,
run_=False,
quiet=True)
m()
else:
from gasp import exec_cmd
rcmd = exec_cmd((
"v.to.rast input={} output={} use={}{} "
"--overwrite --quiet"
).format(
shp, outRaster, __USE,
"" if __USE == "cat" else " attribute_column={}".format(inSource) \
if __USE == "attr" else " val={}".format(inSource)
))
else:
raise ValueError('API {} is not available'.format(api))
return outRaster
def gdal_slope(dem, srs, slope, unit='DEGREES'):
"""
Create Slope Raster
TODO: Test and see if is running correctly
"""
import numpy
import math
from osgeo import gdal
from scipy.ndimage import convolve
from gasp.gt.fmrst import rst_to_array
from gasp.gt.torst import obj_to_rst
from gasp.gt.prop.rst import get_cellsize, get_nodata
# ################ #
# Global Variables #
# ################ #
cellsize = get_cellsize(dem, gisApi='gdal')
# Get Nodata Value
NoData = get_nodata(dem)
# #################### #
# Produce Slope Raster #
# #################### #
# Get Elevation array
arr_dem = rst_to_array(dem)
# We have to get a array with the number of nearst cells with values
with_data = numpy.zeros((arr_dem.shape[0], arr_dem.shape[1]))
numpy.place(with_data, arr_dem != NoData, 1.0)
mask = numpy.array([[1, 1, 1], [1, 0, 1], [1, 1, 1]])
arr_neigh = convolve(with_data, mask, mode='constant')
numpy.place(arr_dem, arr_dem == NoData, 0.0)
# The rate of change in the x direction for the center cell e is:
kernel_dz_dx_left = numpy.array([[0, 0, 1], [0, 0, 2], [0, 0, 1]])
kernel_dz_dx_right = numpy.array([[1, 0, 0], [2, 0, 0], [1, 0, 0]])
dz_dx = (convolve(arr_dem, kernel_dz_dx_left, mode='constant') - convolve(
arr_dem, kernel_dz_dx_right, mode='constant')) / (arr_neigh * cellsize)
# The rate of change in the y direction for cell e is:
kernel_dz_dy_left = numpy.array([[0, 0, 0], [0, 0, 0], [1, 2, 1]])
kernel_dz_dy_right = numpy.array([[1, 2, 1], [0, 0, 0], [0, 0, 0]])
dz_dy = (convolve(arr_dem, kernel_dz_dy_left, mode='constant') - convolve(
arr_dem, kernel_dz_dy_right, mode='constant')) / (arr_neigh * cellsize)
# Taking the rate of change in the x and y direction, the slope for the center cell e is calculated using
rise_run = ((dz_dx)**2 + (dz_dy)**2)**0.5
if unit == 'DEGREES':
arr_slope = numpy.arctan(rise_run) * 57.29578
elif unit == 'PERCENT_RISE':
arr_slope = numpy.tan(numpy.arctan(rise_run)) * 100.0
# Estimate the slope for the cells with less than 8 neigh
aux_dem = rst_to_array(dem)
index_vizinhos = numpy.where(arr_neigh < 8)
for idx in range(len(index_vizinhos[0])):
# Get Value of the cell
lnh = index_vizinhos[0][idx]
col = index_vizinhos[1][idx]
e = aux_dem[lnh][col]
a = aux_dem[lnh - 1][col - 1]
if a == NoData:
a = e
if lnh == 0 or col == 0:
a = e
b = aux_dem[lnh - 1][col]
if b == NoData:
b = e
if lnh == 0:
b = e
try:
c = aux_dem[lnh - 1][col + 1]
if c == NoData:
c = e
if lnh == 0:
c = e
except:
c = e
d = aux_dem[lnh][col - 1]
if d == NoData:
d = e
if col == 0:
d = e
try:
f = aux_dem[lnh][col + 1]
if f == NoData:
f = e
except:
f = e
try:
g = aux_dem[lnh + 1][col - 1]
if g == NoData:
g = e
if col == 0:
g = e
except:
g = e
try:
h = aux_dem[lnh + 1][col]
if h == NoData:
h = e
except:
h = e
try:
i = aux_dem[lnh + 1][col + 1]
if i == NoData:
i = e
except:
i = e
dz_dx = ((c + 2 * f + i) - (a + 2 * d + g)) / (8 * cellsize)
dz_dy = ((g + 2 * h + i) - (a + 2 * b + c)) / (8 * cellsize)
rise_sun = ((dz_dx)**2 + (dz_dy)**2)**0.5
if unit == 'DEGREES':
arr_slope[lnh][col] = math.atan(rise_sun) * 57.29578
elif unit == 'PERCENT_RISE':
arr_slope[lnh][col] = math.tan(math.atan(rise_sun)) * 100.0
# Del value originally nodata
numpy.place(arr_slope, aux_dem == NoData, numpy.nan)
#arr_slope[lnh][col] = slope_degres
obj_to_rst(arr_slope, slope, dem)
