Пример #1
0
 def _spgr(self) -> gemmi.SpaceGroup:
     if self.symmops:
         symm_ops = self.symmops
     else:
         symm_ops = self.symmops_from_spgr
     return gemmi.find_spacegroup_by_ops(
         gemmi.GroupOps([gemmi.Op(o) for o in symm_ops]))
Пример #2
0
 def test_groupops(self):
     gops = gemmi.GroupOps([gemmi.Op(t) for t in ['x, y, z',
                                                  'x, -y, z+1/2',
                                                  'x+1/2, y+1/2, z',
                                                  'x+1/2, -y+1/2, z+1/2']])
     self.assertEqual(gops.find_centering(), 'C')
     self.assertEqual(len(gops), 4)
     self.assertEqual(gemmi.find_spacegroup_by_ops(gops).hm, 'C 1 c 1')
Пример #3
0
 def is_centrosymm(self) -> bool:
     """
     Whether a structuere is centro symmetric or not.
     """
     ops = gemmi.GroupOps([gemmi.Op(o) for o in self.symmops])
     return ops.is_centric()