class ProcessTypeProcessOutput(object):
instance = None
name = None
root = None
tag = ''
artifact_type = StringDescriptor('artifact-type')
display_name = StringDescriptor('display-name')
output_generation_type = StringDescriptor('output-generation-type')
variability_type = StringDescriptor('variability-type')
number_of_outputs = IntegerDescriptor('number-of-outputs')
output_name = StringDescriptor('output-name')
field_definitions = EntityListDescriptor('field-definition', Udfconfig)
def __init__(self, pt_instance, node):
self.instance = pt_instance
self.root = node
self.lims = pt_instance.lims
def __repr__(self):
return "{0}({1})".format(self.__class__.__name__, self.output_name)
def get(self):
pass
class ReagentLot(Entity):
"""Reagent Lots contain information about a particualr lot of reagent used in a step"""
_URI = "reagentlots"
_TAG = "reagent-lot"
_PREFIX = 'lot'
reagent_kit = EntityDescriptor('reagent-kit', ReagentKit)
name = StringDescriptor('name')
lot_number = StringDescriptor('lot-number')
created_date = StringDescriptor('created-date')
last_modified_date = StringDescriptor('last-modified-date')
expiry_date = StringDescriptor('expiry-date')
created_by = EntityDescriptor('created-by', Researcher)
last_modified_by = EntityDescriptor('last-modified-by', Researcher)
status = StringDescriptor('status')
usage_count = IntegerDescriptor('usage-count')
class Container(Entity):
"Container for analyte artifacts."
_URI = 'containers'
_PREFIX = 'con'
name = StringDescriptor('name')
type = EntityDescriptor('type', Containertype)
occupied_wells = IntegerDescriptor('occupied-wells')
placements = PlacementDictionaryDescriptor('placement')
udf = UdfDictionaryDescriptor()
udt = UdtDictionaryDescriptor()
state = StringDescriptor('state')
def get_placements(self):
"""Get the dictionary of locations and artifacts
using the more efficient batch call."""
result = self.placements.copy()
self.lims.get_batch(list(result.values()))
return result
class ProcessTypeProcessOutput(object):
instance = None
name = None
root = None
tag = ''
artifact_type = StringDescriptor('artifact-type')
display_name = StringDescriptor('display-name')
output_generation_type = StringDescriptor('output-generation-type')
variability_type = StringDescriptor('variability-type')
number_of_outputs = IntegerDescriptor('number-of-outputs')
output_name = StringDescriptor('output-name')
def __init__(self, pt_instance, node):
self.instance = pt_instance
self.root = node
def get(self):
pass