def train_models(train,
models,
forecast_len,
full_df=None,
seasonality="infer_from_data",
in_sample=None):
seasons = select_seasonality(train, seasonality)
models_dict = {}
for m in models:
if m == "ARIMA":
models_dict["ARIMA"] = pm.auto_arima(train,
seasonal=True,
m=seasons)
if m == "Prophet":
model = Prophet()
models_dict["Prophet"] = model.fit(prophet_dataframe(train))
if m == "HWAAS":
models_dict["HWAAS"] = ExponentialSmoothing(
train,
seasonal_periods=seasons,
trend='add',
seasonal='add',
damped=True).fit(use_boxcox=True)
if m == "HWAMS":
models_dict["HWAMS"] = ExponentialSmoothing(
train,
seasonal_periods=seasons,
trend='add',
seasonal='mul',
damped=True).fit(use_boxcox=True)
# if m=="HOLT":
# models_dict["HOLT"] = Holt(train,exponential=True).fit()
if m == "PYAF":
model = autof.cForecastEngine()
model.train(iInputDS=train.reset_index(),
iTime='Date',
iSignal='Target',
iHorizon=len(train)) # bad coding to have horison here
models_dict["PYAF"] = model.forecast(iInputDS=train.reset_index(),
iHorizon=forecast_len)
if m == "Gluonts":
freqed = pd.infer_freq(train.index)
if freqed == "MS":
freq = "M"
else:
freq = freqed
estimator = DeepAREstimator(
freq=freq,
prediction_length=forecast_len,
trainer=Trainer(epochs=2)) #use_feat_dynamic_real=True
print(train)
print(type(train))
print(gluonts_dataframe(train))
models_dict["Gluonts"] = estimator.train(
training_data=gluonts_dataframe(train))
if m == "NBEATS":
device = torch.device('cpu')
seasons = select_seasonality(train, seasonality)
if os.path.isfile(CHECKPOINT_NAME):
os.remove(CHECKPOINT_NAME)
stepped = 5
batch_size = 10
if in_sample:
x_train, y_train, x_test, y_test, net, norm_constant = nbeats_dataframe(
full_df, forecast_len, in_sample=True)
optimiser = optim.Adam(net.parameters())
data = data_generator(x_train, y_train, batch_size)
#test_losses = []
for r in range(stepped):
train_100_grad_steps(data, device, net,
optimiser) #test_losses
models_dict["NBEATS"] = {}
models_dict["NBEATS"]["model"] = net
models_dict["NBEATS"]["x_test"] = x_test
models_dict["NBEATS"]["y_test"] = y_test
models_dict["NBEATS"]["constant"] = norm_constant
else: # if out_sample train is df
x_train, y_train, net, norm_constant = nbeats_dataframe(
full_df, forecast_len, in_sample=False)
batch_size = 10 # greater than 4 for viz
optimiser = optim.Adam(net.parameters())
data = data_generator(x_train, y_train, batch_size)
stepped = 5
#test_losses = []
for r in range(stepped):
_, forecast = net(torch.tensor(
x_train, dtype=torch.float)) ### Not Used
p = forecast.detach().numpy() ### Not Used
train_100_grad_steps(data, device, net,
optimiser) #test_losses
models_dict["NBEATS"] = {}
models_dict["NBEATS"]["model"] = net
models_dict["NBEATS"]["tuple"] = (x_train, y_train, net,
norm_constant)
# if m=="ProphetGluonts":
# freqed = pd.infer_freq(train.index)
# if freqed=="MS":
# freq= "M"
# else:
# freq= freqed
# models_dict["ProphetGluonts"] = ProphetPredictor(freq=freq, prediction_length=forecast_len) #use_feat_dynamic_real=True
# models_dict["ProphetGluonts"] = list(models_dict["ProphetGluonts"])
# create a forecast engine. This is the main object handling all the operations
# We use the test-dataset as the last step of our training to generate the evaluation-metrics and do not use the test-dataset during prediction.
# get the best time series model for predicting one week
return models_dict
def prep_estimators(
pred_length: int,
dataset_name: str,
num_series: int,
cardinalities: List[int],
epochs: int,
) -> List[Model]:
trainer = Trainer(epochs=epochs)
models = [
# DeepAREstimator(
# freq = freqs[dataset_name],
# prediction_length = pred_length,
# trainer = trainer,
# use_feat_static_cat = True,
# cardinality = cardinalities,
# distr_output=NegativeBinomialOutput()
# ),
# DeepFactorEstimator(
# freq = freqs[dataset_name],
# prediction_length = pred_length,
# trainer = trainer,
# cardinality = [num_series],
# distr_output=NegativeBinomialOutput(),
# ),
# DeepStateEstimator(
# freq = freqs[dataset_name],
# prediction_length = pred_length,
# trainer = trainer,
# cardinality = cardinalities,
# ),
# NBEATSEstimator(
# freq = freqs[dataset_name],
# prediction_length = pred_length,
# trainer = trainer,
# # TODO is the loss function/evaluation metric we want to use?
# loss_function = 'MAPE',
# ),
NBEATSEnsembleEstimator(freq=freqs[dataset_name],
prediction_length=pred_length,
trainer=trainer,
meta_bagging_size=1),
NBEATSEnsembleEstimator(freq=freqs[dataset_name],
prediction_length=pred_length,
trainer=trainer,
num_stacks=2,
num_blocks=[3],
widths=[256, 2048],
sharing=[True],
expansion_coefficient_lengths=[3],
stack_types=["T", "S"],
meta_bagging_size=1),
# MQCNNEstimator(
# freq = freqs[dataset_name],
# prediction_length = pred_length,
# trainer = trainer,
# ),
# MQRNNEstimator(
# freq = freqs[dataset_name],
# prediction_length = pred_length,
# trainer = trainer,
# ),
# WaveNetEstimator(
# freq = freqs[dataset_name],
# prediction_length = pred_length,
# trainer = trainer,
# cardinality = cardinalities
# ),
]
return models
from dataset import dataset
from estimator import estimator
from gluonts.dataset.loader import TrainDataLoader
from gluonts.trainer import Trainer
import numpy as np
from estimator import net
from gluonts.gluonts_tqdm import tqdm
training_data = dataset.train
transformation = estimator.create_transformation()
dtype = np.float32
num_workers = None
num_prefetch = None
shuffle_buffer_length = None
trainer = Trainer(ctx="cpu",
epochs=1,
learning_rate=0.01,
num_batches_per_epoch=100)
training_data_loader = TrainDataLoader(
dataset=training_data,
transform=transformation,
batch_size=trainer.batch_size,
num_batches_per_epoch=trainer.num_batches_per_epoch,
ctx=trainer.ctx,
dtype=dtype,
num_workers=num_workers,
num_prefetch=num_prefetch,
)
input_names = ['past_target', 'future_target']
with tqdm(training_data_loader) as it:
for batch_no, data_entry in enumerate(it, start=1):
def __init__(
self,
freq: str,
prediction_length: int,
context_length: Optional[int] = None,
trainer: Trainer = Trainer(),
num_stacks: int = 30,
widths: Optional[List[int]] = None,
num_blocks: Optional[List[int]] = None,
num_block_layers: Optional[List[int]] = None,
expansion_coefficient_lengths: Optional[List[int]] = None,
sharing: Optional[List[bool]] = None,
stack_types: Optional[List[str]] = None,
loss_function: Optional[str] = "MAPE",
**kwargs,
) -> None:
"""
Defines an estimator. All parameters should be serializable.
"""
super().__init__(trainer=trainer, **kwargs)
assert (prediction_length >
0), "The value of `prediction_length` should be > 0"
assert (context_length is None or context_length > 0
), "The value of `context_length` should be > 0"
assert (num_stacks is None
or num_stacks > 0), "The value of `num_stacks` should be > 0"
assert (
loss_function is None or loss_function in VALID_LOSS_FUNCTIONS
), f"The loss function has to be one of the following: {VALID_LOSS_FUNCTIONS}."
self.freq = freq
self.prediction_length = prediction_length
self.context_length = (context_length if context_length is not None
else 2 * prediction_length)
# num_stacks has to be handled separately because other arguments have to match its length
self.num_stacks = num_stacks
self.loss_function = loss_function
self.widths = self._validate_nbeats_argument(
argument_value=widths,
argument_name="widths",
default_value=[512],
validation_condition=lambda val: val > 0,
invalidation_message="Values of 'widths' should be > 0",
)
self.num_blocks = self._validate_nbeats_argument(
argument_value=num_blocks,
argument_name="num_blocks",
default_value=[1],
validation_condition=lambda val: val > 0,
invalidation_message="Values of 'num_blocks' should be > 0",
)
self.num_block_layers = self._validate_nbeats_argument(
argument_value=num_block_layers,
argument_name="num_block_layers",
default_value=[4],
validation_condition=lambda val: val > 0,
invalidation_message="Values of 'block_layers' should be > 0",
)
self.sharing = self._validate_nbeats_argument(
argument_value=sharing,
argument_name="sharing",
default_value=[False],
validation_condition=lambda val: True,
invalidation_message="",
)
self.expansion_coefficient_lengths = self._validate_nbeats_argument(
argument_value=expansion_coefficient_lengths,
argument_name="expansion_coefficient_lengths",
default_value=[2],
validation_condition=lambda val: val > 0,
invalidation_message=
"Values of 'expansion_coefficient_lengths' should be > 0",
)
self.stack_types = self._validate_nbeats_argument(
argument_value=stack_types,
argument_name="stack_types",
default_value=["G"],
validation_condition=lambda val: val in VALID_N_BEATS_STACK_TYPES,
invalidation_message=
f"Values of 'stack_types' should be one of {VALID_N_BEATS_STACK_TYPES}",
)
import pandas as pd
import matplotlib.pyplot as plt
csv_path = '/Users/seenli/Documents/workspace/code/pytorch_learn2/time_series_DL/Twitter_volume_AMZN.csv'
df = pd.read_csv(csv_path,header=0,sep=',')
df['timestamp'] = pd.to_datetime(df['timestamp'])
df.set_index(['timestamp'],inplace=True)
# print(df.value[:"2015-04-22 20:47:53"]) # 最后的时间戳是包含[2015-04-22 20:47:53]
# print(df.value[:"2015-04-23 20:47:53"]) # 如果所给时间戳超出了数据的范围的时候就会输出有的数据
# print("开始时间戳", df.index[0]) # start是开始的时间戳，target对应的是对应时间戳的序列信息
data = common.ListDataset([{'start': df.index[0], 'target': df.value[:"2015-04-22 21:00:00"]}], freq='H')#这个数据格式是固定的
# 这里df.index是时间戳，df.value是时间戳对应的值
estimator = deepar.DeepAREstimator(
freq='H',
prediction_length=24,
trainer=Trainer(epochs=50)
)
predictor = estimator.train(training_data=data)
predictor.serialize(Path("/Users/seenli/Documents/workspace/code/pytorch_learn2/time_series_DL/model_save"))
for train_entry, predict_result in zip(data, predictor.predict(data)):
to_pandas(train_entry)[-60:].plot(linewidth=2)
predict_result.plot(color='g', prediction_intervals=[50.0, 90.0])
plt.grid(which='both')
plt.show()
##输出预测结果
prediction = next(predictor.predict(data))
print(prediction.mean)
prediction.plot(output_file='graph.png')
def create_predictor(self, transformation: Transformation,
trained_network: HybridBlock) -> Predictor:
prediction_network = MyPredNetwork1(
prediction_length=self.prediction_length, num_cells=self.num_cells)
copy_parameters(trained_network, prediction_network)
return RepresentableBlockPredictor(
input_transform=transformation,
prediction_net=prediction_network,
batch_size=self.trainer.batch_size,
freq=self.freq,
prediction_length=self.prediction_length,
ctx=self.trainer.ctx)
import mxnet as mx
pred_length = 6
estimator1 = MyEstimator1(prediction_length=pred_length,
context_length=2 * pred_length,
freq="1H",
num_cells=10,
trainer=Trainer(ctx="cpu",
epochs=5,
learning_rate=1e-3,
hybridize=False,
num_batches_per_epoch=20))
predictor1 = estimator1.train(morningtrain)
def fit(self,
*,
timeout: float = None,
iterations: int = None) -> CallResult[None]:
""" Fits NBEATS model using training data from set_training_data and hyperparameters
Keyword Arguments:
timeout {float} -- timeout, considered (default: {None})
iterations {int} -- iterations, considered (default: {None})
Returns:
CallResult[None]
"""
if iterations is None:
iterations = self.hyperparams["epochs"]
has_finished = True
else:
has_finished = False
if self.hyperparams['interpretable']:
num_stacks = 2
num_blocks = [1]
widths = [256, 2048]
sharing = [True]
expansion_coefficient_lengths = [3]
stack_types = ["T", "S"]
estimator_class = NBEATSEnsembleEstimatorHook
else:
num_stacks = 30
num_blocks = [3]
widths = [512]
sharing = [False]
expansion_coefficient_lengths = [32]
stack_types = ["G"]
estimator_class = NBEATSEnsembleEstimator
estimator = estimator_class(
freq=self._freq,
prediction_length=self.hyperparams['prediction_length'],
meta_context_length=[
i
for i in range(2, self.hyperparams['num_context_lengths'] + 2)
],
meta_loss_function=['sMAPE', 'MASE', 'MAPE'],
meta_bagging_size=self.hyperparams['num_estimators'],
num_stacks=num_stacks,
num_blocks=num_blocks,
widths=widths,
sharing=sharing,
expansion_coefficient_lengths=expansion_coefficient_lengths,
stack_types=stack_types,
trainer=Trainer(
epochs=iterations,
learning_rate=self.hyperparams['learning_rate'],
batch_size=self.hyperparams['training_batch_size'],
num_batches_per_epoch=self.hyperparams['steps_per_epoch']),
)
logger.info(f"Fitting for {iterations} iterations")
start_time = time.time()
predictor = estimator.train(self._train_data)
predictor.batch_size = self.hyperparams['inference_batch_size']
predictor.set_aggregation_method('none')
self._is_fit = True
logger.info(
f"Fit for {iterations} epochs, took {time.time() - start_time}s")
if not os.path.isdir(self.hyperparams['weights_dir']):
os.mkdir(self.hyperparams['weights_dir'])
predictor.serialize(Path(self.hyperparams['weights_dir']))
return CallResult(None, has_finished=has_finished)
def __init__(
self,
freq: str,
prediction_length: int,
meta_context_length: Optional[List[int]] = None,
meta_loss_function: Optional[List[str]] = None,
meta_bagging_size: int = 10,
trainer: Trainer = Trainer(),
num_stacks: int = 30,
widths: Optional[List[int]] = None,
num_blocks: Optional[List[int]] = None,
num_block_layers: Optional[List[int]] = None,
expansion_coefficient_lengths: Optional[List[int]] = None,
sharing: Optional[List[bool]] = None,
stack_types: Optional[List[str]] = None,
**kwargs,
) -> None:
super().__init__()
assert (
prediction_length > 0
), "The value of `prediction_length` should be > 0"
self.freq = freq
self.prediction_length = prediction_length
assert meta_loss_function is None or all(
[
loss_function in VALID_LOSS_FUNCTIONS
for loss_function in meta_loss_function
]
), f"Each loss function has to be one of the following: {VALID_LOSS_FUNCTIONS}."
assert meta_context_length is None or all(
[context_length > 0 for context_length in meta_context_length]
), "The value of each `context_length` should be > 0"
assert (
meta_bagging_size is None or meta_bagging_size > 0
), "The value of each `context_length` should be > 0"
self.meta_context_length = (
meta_context_length
if meta_context_length is not None
else [multiplier * prediction_length for multiplier in range(2, 8)]
)
self.meta_loss_function = (
meta_loss_function
if meta_loss_function is not None
else VALID_LOSS_FUNCTIONS
)
self.meta_bagging_size = meta_bagging_size
# The following arguments are validated in the NBEATSEstimator:
self.trainer = trainer
print(f"TRAINER:{str(trainer)}")
self.num_stacks = num_stacks
self.widths = widths
self.num_blocks = num_blocks
self.num_block_layers = num_block_layers
self.expansion_coefficient_lengths = expansion_coefficient_lengths
self.sharing = sharing
self.stack_types = stack_types
# Actually instantiate the different models
self.estimators = self._estimator_factory(**kwargs)
def __init__(
self,
freq: str,
prediction_length: int,
context_length: Optional[int] = None,
trainer: Trainer = Trainer(),
dropout_rate: float = 0.1,
cardinality: Optional[List[int]] = None,
embedding_dimension: int = 20,
distr_output: DistributionOutput = StudentTOutput(),
model_dim: int = 32,
inner_ff_dim_scale: int = 4,
pre_seq: str = "dn",
post_seq: str = "drn",
act_type: str = "softrelu",
num_heads: int = 8,
scaling: bool = True,
lags_seq: Optional[List[int]] = None,
time_features: Optional[List[TimeFeature]] = None,
use_feat_dynamic_real: bool = False,
use_feat_static_cat: bool = False,
num_parallel_samples: int = 100,
) -> None:
super().__init__(trainer=trainer)
assert (
prediction_length > 0
), "The value of `prediction_length` should be > 0"
assert (
context_length is None or context_length > 0
), "The value of `context_length` should be > 0"
assert dropout_rate >= 0, "The value of `dropout_rate` should be >= 0"
assert (
cardinality is not None or not use_feat_static_cat
), "You must set `cardinality` if `use_feat_static_cat=True`"
assert cardinality is None or [
c > 0 for c in cardinality
], "Elements of `cardinality` should be > 0"
assert (
embedding_dimension > 0
), "The value of `embedding_dimension` should be > 0"
assert (
num_parallel_samples > 0
), "The value of `num_parallel_samples` should be > 0"
self.freq = freq
self.prediction_length = prediction_length
self.context_length = (
context_length if context_length is not None else prediction_length
)
self.distr_output = distr_output
self.dropout_rate = dropout_rate
self.use_feat_dynamic_real = use_feat_dynamic_real
self.use_feat_static_cat = use_feat_static_cat
self.cardinality = cardinality if use_feat_static_cat else [1]
self.embedding_dimension = embedding_dimension
self.num_parallel_samples = num_parallel_samples
self.lags_seq = (
lags_seq
if lags_seq is not None
else get_lags_for_frequency(freq_str=freq)
)
self.time_features = (
time_features
if time_features is not None
else time_features_from_frequency_str(self.freq)
)
self.history_length = self.context_length + max(self.lags_seq)
self.scaling = scaling
self.config = {
"model_dim": model_dim,
"pre_seq": pre_seq,
"post_seq": post_seq,
"dropout_rate": dropout_rate,
"inner_ff_dim_scale": inner_ff_dim_scale,
"act_type": act_type,
"num_heads": num_heads,
}
self.encoder = TransformerEncoder(
self.context_length, self.config, prefix="enc_"
)
self.decoder = TransformerDecoder(
self.prediction_length, self.config, prefix="dec_"
)
def __init__(
self,
freq: str,
prediction_length: int,
trainer: Trainer = Trainer(),
context_length: Optional[int] = None,
num_layers: int = 2,
num_cells: int = 40,
cell_type: str = "lstm",
dropout_rate: float = 0.1,
use_feat_dynamic_real: bool = False,
use_feat_static_cat: bool = False,
use_feat_static_real: bool = False,
cardinality: Optional[List[int]] = None,
embedding_dimension: int = 20,
distr_output: DistributionOutput = StudentTOutput(),
scaling: bool = True,
lags_seq: Optional[List[int]] = None,
time_features: Optional[List[TimeFeature]] = None,
num_parallel_samples: int = 100,
) -> None:
super().__init__(trainer=trainer)
assert (prediction_length >
0), "The value of `prediction_length` should be > 0"
assert (context_length is None or context_length > 0
), "The value of `context_length` should be > 0"
assert num_layers > 0, "The value of `num_layers` should be > 0"
assert num_cells > 0, "The value of `num_cells` should be > 0"
assert dropout_rate >= 0, "The value of `dropout_rate` should be >= 0"
assert (cardinality is not None and use_feat_static_cat) or (
cardinality is None and not use_feat_static_cat
), "You should set `cardinality` if and only if `use_feat_static_cat=True`"
assert cardinality is None or [
c > 0 for c in cardinality
], "Elements of `cardinality` should be > 0"
assert (embedding_dimension >
0), "The value of `embedding_dimension` should be > 0"
assert (num_parallel_samples >
0), "The value of `num_parallel_samples` should be > 0"
self.freq = freq
self.context_length = (context_length if context_length is not None
else prediction_length)
self.prediction_length = prediction_length
self.distr_output = distr_output
self.num_layers = num_layers
self.num_cells = num_cells
self.cell_type = cell_type
self.dropout_rate = dropout_rate
self.use_feat_dynamic_real = use_feat_dynamic_real
self.use_feat_static_cat = use_feat_static_cat
self.use_feat_static_real = use_feat_static_real
self.cardinality = cardinality if use_feat_static_cat else [1]
self.embedding_dimension = embedding_dimension
self.scaling = scaling
self.lags_seq = (lags_seq if lags_seq is not None else
get_lags_for_frequency(freq_str=freq))
self.time_features = (time_features if time_features is not None else
time_features_from_frequency_str(self.freq))
self.history_length = self.context_length + max(self.lags_seq)
self.num_parallel_samples = num_parallel_samples
def __init__(
self,
freq: str,
prediction_length: int,
target_dim: int,
trainer: Trainer = Trainer(),
# number of dimension to sample at training time
context_length: Optional[int] = None,
num_layers: int = 2,
num_cells: int = 40,
cell_type: str = "lstm",
num_parallel_samples: int = 100,
dropout_rate: float = 0.1,
target_dim_sample: Optional[int] = None,
distr_output: Optional[DistributionOutput] = None,
rank: Optional[int] = 2,
scaling: bool = True,
pick_incomplete: bool = False,
lags_seq: Optional[List[int]] = None,
shuffle_target_dim: bool = True,
time_features: Optional[List[TimeFeature]] = None,
conditioning_length: int = 100,
use_marginal_transformation: bool = False,
) -> None:
super().__init__(trainer=trainer)
assert (prediction_length >
0), "The value of `prediction_length` should be > 0"
assert (context_length is None or context_length > 0
), "The value of `context_length` should be > 0"
assert num_layers > 0, "The value of `num_layers` should be > 0"
assert num_cells > 0, "The value of `num_cells` should be > 0"
assert (num_parallel_samples >
0), "The value of `num_eval_samples` should be > 0"
assert dropout_rate >= 0, "The value of `dropout_rate` should be >= 0"
if distr_output is not None:
self.distr_output = distr_output
else:
self.distr_output = LowrankGPOutput(rank=rank)
self.freq = freq
self.context_length = (context_length if context_length is not None
else prediction_length)
self.prediction_length = prediction_length
self.target_dim = target_dim
self.target_dim_sample = (target_dim if target_dim_sample is None else
min(target_dim_sample, target_dim))
self.shuffle_target_dim = shuffle_target_dim
self.num_layers = num_layers
self.num_cells = num_cells
self.cell_type = cell_type
self.num_parallel_samples = num_parallel_samples
self.dropout_rate = dropout_rate
self.lags_seq = (lags_seq if lags_seq is not None else
get_lags_for_frequency(freq_str=freq))
self.time_features = (time_features if time_features is not None else
time_features_from_frequency_str(self.freq))
self.history_length = self.context_length + max(self.lags_seq)
self.pick_incomplete = pick_incomplete
self.scaling = scaling
self.conditioning_length = conditioning_length
self.use_marginal_transformation = use_marginal_transformation
if self.use_marginal_transformation:
self.output_transform = cdf_to_gaussian_forward_transform
else:
self.output_transform = None
dataset_name = "m4_hourly"
dataset = get_dataset(dataset_name)
results = []
# If you want to use GPU, please set ctx="gpu(0)"
estimators = [
# partial(
# DeepAREstimator,
# trainer=Trainer(
# ctx="cpu",
# epochs=epochs,
# num_batches_per_epoch=num_batches_per_epoch
# )
# ),
partial(MQCNNEstimator,
trainer=Trainer(ctx="cpu",
epochs=epochs,
num_batches_per_epoch=num_batches_per_epoch)),
]
for estimator in estimators:
estimator = estimator(prediction_length=dataset.metadata.prediction_length,
freq=dataset.metadata.freq)
predictor = estimator.train(dataset.train)
forecast_it, ts_it = make_evaluation_predictions(dataset.test,
predictor=predictor,
num_eval_samples=100)
agg_metrics, item_metrics = Evaluator()(ts_it,
forecast_it,
num_series=len(dataset.test))
def train_predictor(region_df_dict,
end_train_date,
regions_list,
max_epochs,
learning_rate,
target_col,
feat_dynamic_cols=None,
fixed_seeds=False):
if fixed_seeds:
# Seeds setting taken from
# https://gluon-ts.mxnet.io/examples/extended_forecasting_tutorial/extended_tutorial.html
mx.random.seed(0)
np.random.seed(0)
estimator = DeepAREstimator(
freq=md.FREQ,
prediction_length=md.NB_HOURS_PRED,
trainer=Trainer(epochs=max_epochs,
learning_rate=learning_rate,
learning_rate_decay_factor=md.LR_DECAY_FACTOR),
use_feat_dynamic_real=feat_dynamic_cols is not None)
if feat_dynamic_cols is not None:
training_data = ListDataset([{
"item_id":
region,
"start":
region_df_dict[region].index[0],
"target":
region_df_dict[region][target_col][:end_train_date],
"feat_dynamic_real": [
region_df_dict[region][feat_dynamic_col][:end_train_date]
for feat_dynamic_col in feat_dynamic_cols
]
} for region in regions_list],
freq=md.FREQ)
else:
training_data = ListDataset(
[{
"item_id": region,
"start": region_df_dict[region].index[0],
"target": region_df_dict[region][target_col][:end_train_date]
} for region in regions_list],
freq=md.FREQ)
model_path = predictor_path(region_df_dict,
regions_list,
max_epochs,
learning_rate,
feat_dynamic_cols,
fixed_seeds=fixed_seeds)
model_dir, model_name = os.path.split(model_path)
logging.info("Training deepar model {}".format(model_name))
logging.getLogger().setLevel(logging.WARNING)
predictor = estimator.train(training_data=training_data)
logging.getLogger().setLevel(logging.INFO)
logging.info("Saving model with {} epochs and learning rate of {}".format(
max_epochs, learning_rate))
with open(model_path, "wb") as file:
pickle.dump(predictor, file)
return predictor
def fit(self, df, future_regressor = []):
"""Train algorithm given data supplied.
Args:
df (pandas.DataFrame): Datetime Indexed
"""
df = self.basic_profile(df)
try:
from mxnet.random import seed as mxnet_seed
mxnet_seed(self.random_seed)
except Exception:
pass
gluon_train = df.transpose()
self.train_index = gluon_train.index
gluon_freq = str(self.frequency).split('-')[0]
if gluon_freq in ["MS", "1MS"]:
gluon_freq = "M"
if int(self.verbose) > 1:
print(f"Gluon Frequency is {gluon_freq}")
if str(self.context_length).replace('.', '').isdigit():
self.gluon_context_length = int(float(self.context_length))
elif 'forecastlength' in str(self.context_length).lower():
len_int = int([x for x in str(self.context_length) if x.isdigit()][0])
self.gluon_context_length = int(len_int * self.forecast_length)
else:
self.gluon_context_length = 2 * self.forecast_length
self.context_length = '2ForecastLength'
ts_metadata = {'num_series': len(gluon_train.index),
'freq': gluon_freq,
'gluon_start': [gluon_train.columns[0] for _ in range(len(gluon_train.index))],
'context_length': self.gluon_context_length,
'forecast_length': self.forecast_length
}
self.test_ds = ListDataset([{FieldName.TARGET: target,
FieldName.START: start
}
for (target, start) in zip(
gluon_train.values,
ts_metadata['gluon_start']
)],
freq=ts_metadata['freq']
)
if self.gluon_model == 'DeepAR':
from gluonts.model.deepar import DeepAREstimator
estimator = DeepAREstimator(freq=ts_metadata['freq'],
context_length=ts_metadata['context_length'],
prediction_length=ts_metadata['forecast_length']
,trainer=Trainer(epochs=self.epochs,
learning_rate=self.learning_rate)
)
elif self.gluon_model == 'NPTS':
from gluonts.model.npts import NPTSEstimator
estimator = NPTSEstimator(freq=ts_metadata['freq'],
context_length=ts_metadata['context_length'],
prediction_length=ts_metadata['forecast_length'])
elif self.gluon_model == 'MQCNN':
from gluonts.model.seq2seq import MQCNNEstimator
estimator = MQCNNEstimator(freq=ts_metadata['freq'],
context_length=ts_metadata['context_length'],
prediction_length=ts_metadata['forecast_length']
,trainer=Trainer(epochs=self.epochs,
learning_rate=self.learning_rate)
)
elif self.gluon_model == 'SFF':
from gluonts.model.simple_feedforward import SimpleFeedForwardEstimator
estimator = SimpleFeedForwardEstimator(
prediction_length=ts_metadata['forecast_length'],
context_length=ts_metadata['context_length'],
freq=ts_metadata['freq'],
trainer=Trainer(epochs=self.epochs,
learning_rate=self.learning_rate,
hybridize=False, num_batches_per_epoch=100
))
elif self.gluon_model == 'Transformer':
from gluonts.model.transformer import TransformerEstimator
estimator = TransformerEstimator(
prediction_length=ts_metadata['forecast_length'],
context_length=ts_metadata['context_length'],
freq=ts_metadata['freq'],
trainer=Trainer(epochs=self.epochs,
learning_rate=self.learning_rate))
elif self.gluon_model == 'DeepState':
from gluonts.model.deepstate import DeepStateEstimator
estimator = DeepStateEstimator(
prediction_length=ts_metadata['forecast_length'],
past_length=ts_metadata['context_length'],
freq=ts_metadata['freq'],
use_feat_static_cat=False,
cardinality = [1],
trainer=Trainer(ctx='cpu', epochs=self.epochs,
learning_rate=self.learning_rate))
elif self.gluon_model == 'DeepFactor':
from gluonts.model.deep_factor import DeepFactorEstimator
estimator = DeepFactorEstimator(freq=ts_metadata['freq'],
context_length=ts_metadata['context_length'],
prediction_length=ts_metadata['forecast_length']
,trainer=Trainer(epochs=self.epochs,
learning_rate=self.learning_rate)
)
elif self.gluon_model == 'WaveNet':
# Usually needs more epochs/training iterations than other models do
from gluonts.model.wavenet import WaveNetEstimator
estimator = WaveNetEstimator(freq=ts_metadata['freq'],
prediction_length=ts_metadata['forecast_length']
,trainer=Trainer(epochs=self.epochs,
learning_rate=self.learning_rate)
)
else:
raise ValueError("'gluon_model' not recognized.")
self.GluonPredictor = estimator.train(self.test_ds)
self.ts_metadata = ts_metadata
self.fit_runtime = datetime.datetime.now() - self.startTime
return self
# npts predictor
npts_predictor = NPTSPredictor(freq=freq,
prediction_length=prediction_length,
context_length=300, kernel_type='uniform',
use_seasonal_model=False)
npts_forecast = list(npts_predictor.predict(train_ds))
# deep ar
distr = PiecewiseLinearOutput(7)
deep_ar_trainer = Trainer(
ctx=mx.context.gpu() if is_gpu & args.use_cuda else mx.context.cpu(),
batch_size=128,
learning_rate=1e-2,
epochs=20,
num_batches_per_epoch=args.number_of_batches_per_epoch,
clip_gradient=5.48481845049343,
weight_decay=0.001,
hybridize=False)
deep_ar_estimator = DeepAREstimator(
prediction_length=prediction_length,
context_length=prediction_length*2,
num_layers=2,
num_cells=128,
cell_type='gru',
dropout_rate=0.1,
scaling=True,
lags_seq=np.arange(1, 1+1).tolist(),
freq=freq,
def train_models(train,
models,
forecast_len,
full_df=None,
seasonality="infer_from_data",
in_sample=None,
freq=None,
GPU=None):
seasons = select_seasonality(train, seasonality)
periods = select_seasonality(train, 'periodocity')
models_dict = {}
for m in models:
if in_sample:
print(
"Model {} is being trained for in sample prediction".format(m))
else:
print("Model {} is being trained for out of sample prediction".
format(m))
if m == "ARIMA":
models_dict[m] = pm.auto_arima(train, seasonal=True, m=seasons)
if m == "Prophet":
if freq == "D":
model = Prophet(daily_seasonality=True)
else:
model = Prophet()
models_dict[m] = model.fit(prophet_dataframe(train))
if m == "HWAAS":
try:
models_dict[m] = ExponentialSmoothing(
train,
seasonal_periods=seasons,
trend='add',
seasonal='add',
damped=True).fit(use_boxcox=True)
except:
models_dict[m] = ExponentialSmoothing(
train,
seasonal_periods=seasons,
trend='add',
seasonal='add',
damped=True).fit(use_boxcox=False)
if m == "HWAMS":
try:
models_dict[m] = ExponentialSmoothing(
train,
seasonal_periods=seasons,
trend='add',
seasonal='mul',
damped=True).fit(use_boxcox=True)
except:
try:
models_dict[m] = ExponentialSmoothing(
train,
seasonal_periods=seasons,
trend='add',
seasonal='mul',
damped=True).fit(use_boxcox=False)
except:
models_dict[m] = ExponentialSmoothing(
train,
seasonal_periods=seasons,
trend=None,
seasonal='add').fit(use_boxcox=False)
# if m=="HOLT":
# models_dict["HOLT"] = Holt(train,exponential=True).fit()
if m == "PYAF":
model = autof()
model.train(iInputDS=train.reset_index(),
iTime='Date',
iSignal='Target',
iHorizon=len(train)) # bad coding to have horison here
models_dict[m] = model.forecast(iInputDS=train.reset_index(),
iHorizon=forecast_len)
if m == "Gluonts":
freqed = pd.infer_freq(train.index)
if freqed == "MS":
freq = "M"
else:
freq = freqed
estimator = DeepAREstimator(
freq=freq,
prediction_length=forecast_len,
trainer=Trainer(epochs=6,
ctx='gpu')) #use_feat_dynamic_real=True
if GPU:
models_dict[m] = estimator.train(
training_data=gluonts_dataframe(train))
else:
models_dict[m] = estimator.train(
training_data=gluonts_dataframe(train))
if m == "NBEATS":
if GPU:
device = torch.device('cuda')
else:
device = torch.device('cpu')
if os.path.isfile(CHECKPOINT_NAME):
os.remove(CHECKPOINT_NAME)
stepped = 35
batch_size = 10
if in_sample:
x_train, y_train, x_test, y_test, net, norm_constant = nbeats_dataframe(
full_df, forecast_len, in_sample=True, device=device)
optimiser = optim.Adam(net.parameters())
data = data_generator(x_train, y_train, batch_size)
#test_losses = []
for r in range(stepped):
train_100_grad_steps(data, device, net,
optimiser) #test_losses
models_dict[m] = {}
models_dict[m]["model"] = net
models_dict[m]["x_test"] = x_test
models_dict[m]["y_test"] = y_test
models_dict[m]["constant"] = norm_constant
else: # if out_sample train is df
x_train, y_train, net, norm_constant = nbeats_dataframe(
full_df, forecast_len, in_sample=False, device=device)
batch_size = 10 # greater than 4 for viz
optimiser = optim.Adam(net.parameters())
data = data_generator(x_train, y_train, batch_size)
stepped = 5
#test_losses = []
for r in range(stepped):
# _, forecast = net(torch.tensor(x_train, dtype=torch.float)) ### Not Used
# if GPU:
# p = forecast.detach().numpy() ### Not Used
# else:
# p = forecast.detach().numpy() ### Not Used
train_100_grad_steps(data, device, net,
optimiser) #test_losses
models_dict[m] = {}
models_dict[m]["model"] = net
models_dict[m]["tuple"] = (x_train, y_train, net,
norm_constant)
# if m=="TBA":
# bat = TBATS(use_arma_errors=False,use_box_cox=True)
# models_dict[m] = bat.fit(train)
if m == "TATS":
bat = TBATS(seasonal_periods=list(
get_unique_N(season_list(train), 1)),
use_arma_errors=False,
use_trend=True)
models_dict[m] = bat.fit(train)
if m == "TBAT":
bat = TBATS(use_arma_errors=False,
use_box_cox=True,
use_trend=True)
models_dict[m] = bat.fit(train)
if m == "TBATS1":
bat = TBATS(seasonal_periods=[seasons],
use_arma_errors=False,
use_box_cox=True,
use_trend=True)
models_dict[m] = bat.fit(train)
if m == "TBATP1":
bat = TBATS(seasonal_periods=[periods],
use_arma_errors=False,
use_box_cox=True,
use_trend=True)
models_dict[m] = bat.fit(train)
if m == "TBATS2":
bat = TBATS(seasonal_periods=list(
get_unique_N(season_list(train), 2)),
use_arma_errors=False,
use_box_cox=True,
use_trend=True)
models_dict[m] = bat.fit(train)
# if m=="ProphetGluonts":
# freqed = pd.infer_freq(train.index)
# if freqed=="MS":
# freq= "M"
# else:
# freq= freqed
# models_dict["ProphetGluonts"] = ProphetPredictor(freq=freq, prediction_length=forecast_len) #use_feat_dynamic_real=True
# models_dict["ProphetGluonts"] = list(models_dict["ProphetGluonts"])
return models_dict, seasons
import pyximport; pyximport.install()
import sys
import pandas as pd
from GTS_new_data import load_dataset
from pathlib import Path
from gluonts.model.predictor import Predictor
from gluonts.model.deepar import DeepAREstimator
from gluonts.trainer import Trainer
from gluonts.dataset.common import ListDataset
if __name__ == "__main__":
filename = sys.argv[1]
df = load_dataset(filename)
training_data = ListDataset(
[{"start": df.index[1], "target": df.iloc[:-12].values[:, 1]}],
freq = "1min"
)
estimator = DeepAREstimator(freq="1min", prediction_length=12, trainer=Trainer(epochs=100))
predictor = estimator.train(training_data=training_data)
predictor.serialize(Path("."))
def __init__(
self,
freq: str,
prediction_length: int,
trainer: Trainer = Trainer(),
context_length: Optional[int] = None,
num_layers: int = 2,
num_cells: int = 40,
cell_type: str = "lstm",
dropout_rate: float = 0.1,
use_feat_dynamic_real: bool = False,
use_feat_static_cat: bool = False,
use_feat_static_real: bool = False,
cardinality: Optional[List[int]] = None,
embedding_dimension: Optional[List[int]] = None,
distr_output: DistributionOutput = StudentTOutput(),
scaling: bool = True,
lags_seq: Optional[List[int]] = None,
time_features: Optional[List[TimeFeature]] = None,
num_parallel_samples: int = 100,
imputation_method: Optional[MissingValueImputation] = None,
dtype: DType = np.float32,
) -> None:
super().__init__(trainer=trainer, dtype=dtype)
assert (
prediction_length > 0
), "The value of `prediction_length` should be > 0"
assert (
context_length is None or context_length > 0
), "The value of `context_length` should be > 0"
assert num_layers > 0, "The value of `num_layers` should be > 0"
assert num_cells > 0, "The value of `num_cells` should be > 0"
assert dropout_rate >= 0, "The value of `dropout_rate` should be >= 0"
assert (cardinality and use_feat_static_cat) or (
not (cardinality or use_feat_static_cat)
), "You should set `cardinality` if and only if `use_feat_static_cat=True`"
assert cardinality is None or all(
[c > 0 for c in cardinality]
), "Elements of `cardinality` should be > 0"
assert embedding_dimension is None or all(
[e > 0 for e in embedding_dimension]
), "Elements of `embedding_dimension` should be > 0"
assert (
num_parallel_samples > 0
), "The value of `num_parallel_samples` should be > 0"
self.freq = freq
self.context_length = (
context_length if context_length is not None else prediction_length
)
self.prediction_length = prediction_length
self.distr_output = distr_output
self.distr_output.dtype = dtype
self.num_layers = num_layers
self.num_cells = num_cells
self.cell_type = cell_type
self.dropout_rate = dropout_rate
self.use_feat_dynamic_real = use_feat_dynamic_real
self.use_feat_static_cat = use_feat_static_cat
self.use_feat_static_real = use_feat_static_real
self.cardinality = (
cardinality if cardinality and use_feat_static_cat else [1]
)
self.embedding_dimension = (
embedding_dimension
if embedding_dimension is not None
else [min(50, (cat + 1) // 2) for cat in self.cardinality]
)
self.scaling = scaling
self.lags_seq = (
lags_seq
if lags_seq is not None
else get_lags_for_frequency(freq_str=freq)
)
self.time_features = (
time_features
if time_features is not None
else time_features_from_frequency_str(self.freq)
)
self.history_length = self.context_length + max(self.lags_seq)
self.num_parallel_samples = num_parallel_samples
self.imputation_method = (
imputation_method
if imputation_method is not None
else DummyValueImputation(self.distr_output.value_in_support)
)
# Standard library imports
from functools import partial
# Third-party imports
import pytest
# First-party imports
from gluonts.model.deepstate import DeepStateEstimator
from gluonts.testutil.dummy_datasets import make_dummy_datasets_with_features
from gluonts.trainer import Trainer
common_estimator_hps = dict(
freq="D",
prediction_length=3,
trainer=Trainer(epochs=3, num_batches_per_epoch=2, batch_size=1),
past_length=10,
)
@pytest.mark.parametrize(
"estimator, datasets",
[
# No features
(
partial(
DeepStateEstimator,
**common_estimator_hps,
cardinality=[1],
use_feat_static_cat=False,
),
def __init__(
self,
freq: str,
prediction_length: int,
context_length: Optional[int] = None,
use_feat_dynamic_real: bool = False,
use_feat_static_cat: bool = False,
cardinality: List[int] = None,
embedding_dimension: List[int] = None,
add_time_feature: bool = False,
add_age_feature: bool = False,
enable_decoder_dynamic_feature: bool = False,
seed: Optional[int] = None,
decoder_mlp_dim_seq: Optional[List[int]] = None,
channels_seq: Optional[List[int]] = None,
dilation_seq: Optional[List[int]] = None,
kernel_size_seq: Optional[List[int]] = None,
use_residual: bool = True,
quantiles: Optional[List[float]] = None,
trainer: Trainer = Trainer(),
scaling: bool = False,
) -> None:
assert (prediction_length >
0), f"Invalid prediction length: {prediction_length}."
assert decoder_mlp_dim_seq is None or all(
d > 0 for d in decoder_mlp_dim_seq
), "Elements of `mlp_hidden_dimension_seq` should be > 0"
assert channels_seq is None or all(
d > 0
for d in channels_seq), "Elements of `channels_seq` should be > 0"
assert dilation_seq is None or all(
d > 0
for d in dilation_seq), "Elements of `dilation_seq` should be > 0"
# TODO: add support for kernel size=1
assert kernel_size_seq is None or all(
d > 1 for d in
kernel_size_seq), "Elements of `kernel_size_seq` should be > 0"
assert quantiles is None or all(
0 <= d <= 1 for d in
quantiles), "Elements of `quantiles` should be >= 0 and <= 1"
self.decoder_mlp_dim_seq = (decoder_mlp_dim_seq if decoder_mlp_dim_seq
is not None else [30])
self.channels_seq = (channels_seq
if channels_seq is not None else [30, 30, 30])
self.dilation_seq = (dilation_seq
if dilation_seq is not None else [1, 3, 5])
self.kernel_size_seq = (kernel_size_seq
if kernel_size_seq is not None else [7, 3, 3])
self.quantiles = (quantiles if quantiles is not None else
[0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9])
assert (len(self.channels_seq) == len(self.dilation_seq) == len(
self.kernel_size_seq)), (
f"mismatch CNN configurations: {len(self.channels_seq)} vs. "
f"{len(self.dilation_seq)} vs. {len(self.kernel_size_seq)}")
if seed:
np.random.seed(seed)
mx.random.seed(seed)
# `use_static_feat` and `use_dynamic_feat` always True because network
# always receives input; either from the input data or constants
encoder = HierarchicalCausalConv1DEncoder(
dilation_seq=self.dilation_seq,
kernel_size_seq=self.kernel_size_seq,
channels_seq=self.channels_seq,
use_residual=use_residual,
use_static_feat=True,
use_dynamic_feat=True,
prefix="encoder_",
)
decoder = ForkingMLPDecoder(
dec_len=prediction_length,
final_dim=self.decoder_mlp_dim_seq[-1],
hidden_dimension_sequence=self.decoder_mlp_dim_seq[:-1],
prefix="decoder_",
)
quantile_output = QuantileOutput(self.quantiles)
super().__init__(
encoder=encoder,
decoder=decoder,
quantile_output=quantile_output,
freq=freq,
prediction_length=prediction_length,
context_length=context_length,
use_feat_dynamic_real=use_feat_dynamic_real,
use_feat_static_cat=use_feat_static_cat,
enable_decoder_dynamic_feature=enable_decoder_dynamic_feature,
cardinality=cardinality,
embedding_dimension=embedding_dimension,
add_time_feature=add_time_feature,
add_age_feature=add_age_feature,
trainer=trainer,
scaling=scaling,
)
def forecast_dataset(dataset,
epochs=100,
learning_rate=1e-3,
num_samples=100,
model="SimpleFeedForward",
r_method="ets",
alpha=0,
distrib="Gaussian"):
if distrib == "Gaussian":
distr_output = GaussianOutput()
elif distrib == "Laplace":
distr_output = LaplaceOutput()
elif distrib == "PiecewiseLinear":
distr_output = PiecewiseLinearOutput(num_pieces=2)
elif distrib == "Uniform":
distr_output = UniformOutput()
elif distrib == "Student":
distr_output = StudentTOutput()
else:
distr_output = None
if model != "GaussianProcess":
ctx = mx.Context("gpu")
else:
ctx = mx.Context("cpu")
# Trainer
trainer = Trainer(epochs=epochs,
learning_rate=learning_rate,
num_batches_per_epoch=100,
ctx=ctx,
hybridize=True if model[0] != "c" else False)
# Estimator (if machine learning model)
if model == "SimpleFeedForward": # 10s / epochs for context 60*24
estimator = SimpleFeedForwardEstimator(
num_hidden_dimensions=[10],
prediction_length=dataset.prediction_length,
context_length=dataset.context_length,
freq=dataset.freq,
trainer=trainer,
distr_output=distr_output)
elif model == "cSimpleFeedForward": # 10s / epochs for context 60*24
estimator = CustomSimpleFeedForwardEstimator(
prediction_length=dataset.prediction_length,
context_length=dataset.context_length,
freq=dataset.freq,
trainer=trainer,
num_cells=40,
alpha=alpha,
distr_output=distr_output,
distr_output_type=distrib)
elif model == "CanonicalRNN": # 80s /epochs for context 60*24, idem for 60*1
estimator = canonical.CanonicalRNNEstimator(
freq=dataset.freq,
context_length=dataset.context_length,
prediction_length=dataset.prediction_length,
trainer=trainer,
distr_output=distr_output,
)
elif model == "DeepAr":
estimator = deepar.DeepAREstimator(
freq=dataset.freq,
context_length=dataset.context_length,
prediction_length=dataset.prediction_length,
trainer=trainer,
distr_output=distr_output,
)
elif model == "DeepFactor": # 120 s/epochs if one big time serie, 1.5s if 183 time series
estimator = deep_factor.DeepFactorEstimator(
freq=dataset.freq,
context_length=dataset.context_length,
prediction_length=dataset.prediction_length,
trainer=trainer,
distr_output=distr_output,
)
elif model == "DeepState": # Very slow on cpu
estimator = deepstate.DeepStateEstimator(
freq=dataset.freq,
prediction_length=dataset.prediction_length,
trainer=trainer,
cardinality=list([1]),
use_feat_static_cat=False)
elif model == "GaussianProcess": # CPU / GPU problem
estimator = gp_forecaster.GaussianProcessEstimator(
freq=dataset.freq,
prediction_length=dataset.prediction_length,
trainer=trainer,
cardinality=1)
elif model == "NPTS":
estimator = npts.NPTSEstimator(
freq=dataset.freq, prediction_length=dataset.prediction_length)
elif model == "MQCNN":
estimator = seq2seq.MQCNNEstimator(
prediction_length=dataset.prediction_length,
freq=dataset.freq,
context_length=dataset.context_length,
trainer=trainer,
quantiles=list([0.005, 0.05, 0.25, 0.5, 0.75, 0.95, 0.995]))
elif model == "MQRNN":
estimator = seq2seq.MQRNNEstimator(
prediction_length=dataset.prediction_length,
freq=dataset.freq,
context_length=dataset.context_length,
trainer=trainer,
quantiles=list([0.005, 0.05, 0.25, 0.5, 0.75, 0.95, 0.995]))
elif model == "RNN2QR": # Must be investigated
estimator = seq2seq.RNN2QRForecaster(
prediction_length=dataset.prediction_length,
freq=dataset.freq,
context_length=dataset.context_length,
trainer=trainer,
cardinality=dataset.cardinality,
embedding_dimension=1,
encoder_rnn_layer=1,
encoder_rnn_num_hidden=1,
decoder_mlp_layer=[1],
decoder_mlp_static_dim=1)
elif model == "SeqToSeq": # Must be investigated
estimator = seq2seq.Seq2SeqEstimator(
prediction_length=dataset.prediction_length,
freq=dataset.freq,
context_length=dataset.context_length,
trainer=trainer,
cardinality=[1],
embedding_dimension=1,
decoder_mlp_layer=[1],
decoder_mlp_static_dim=1,
encoder=Seq2SeqEncoder())
elif model == "Transformer": # Make the computer lag the first time
estimator = transformer.TransformerEstimator(
prediction_length=dataset.prediction_length,
freq=dataset.freq,
context_length=dataset.context_length,
trainer=trainer)
else:
estimator = None
# Predictor (directly if non machine learning model and from estimator if machine learning)
if model == "Prophet":
predictor = prophet.ProphetPredictor(
freq=dataset.freq,
prediction_length=dataset.prediction_length,
)
elif model == "R":
predictor = r_forecast.RForecastPredictor(
freq=dataset.freq,
prediction_length=dataset.prediction_length,
method_name=r_method)
elif model == "SeasonalNaive":
predictor = seasonal_naive.SeasonalNaivePredictor(
freq=dataset.freq,
prediction_length=dataset.prediction_length,
season_length=24)
else:
predictor = estimator.train(dataset.train_ds)
if model[0] != "c":
predictor.serialize(Path("temp"))
predictor = Predictor.deserialize(
Path("temp"), ctx=mx.cpu(0)) # fix for deepstate
# Evaluate
forecast_it, ts_it = make_evaluation_predictions(
dataset=dataset.test_ds, # test dataset
predictor=predictor, # predictor
num_samples=num_samples, # num of sample paths we want for evaluation
)
return list(forecast_it), list(ts_it)
model2 = module.load(load_pars ={ 'path': out_pars['path'] +"/model/"})
from gluonts.model.deepar import DeepAREstimator
from gluonts.distribution.neg_binomial import NegativeBinomialOutput
from gluonts.trainer import Trainer
estimator = DeepAREstimator(
prediction_length = 12,
freq = "D",
distr_output = NegativeBinomialOutput(),
use_feat_static_cat =True,
use_feat_dynamic_real =True,
cardinality = [3049, 7, 3, 10, 3],
trainer = Trainer(
learning_rate = 1e-3,
epochs = 1,
num_batches_per_epoch = 10,
batch_size = 10
)
)
predictor = estimator.train(TD.train)
from gluonts.evaluation.backtest import make_evaluation_predictions
from gluonts.evaluation import Evaluator
forecast_it, ts_it = make_evaluation_predictions(
dataset=TD.test,
predictor=predictor,
num_samples=100
)
def assert_invalid_param(param_name: str, param_values: List[Any],
exp_msg: str) -> None:
for x in param_values:
with pytest.raises(AssertionError) as excinfo:
Trainer(**{param_name: x})
assert exp_msg in str(excinfo.value)
estimator = NBEATSEnsembleEstimator(
prediction_length=prediction_length,
#context_length=7*prediction_length,
meta_bagging_size=3, # 3, ## Change back to 10 after testing??
meta_context_length=[prediction_length * mlp for mlp in [3, 5, 7]
], ## Change back to (2,7) // 3,5,7
meta_loss_function=['sMAPE'
], ## Change back to all three MAPE, MASE ...
num_stacks=30,
widths=[512],
freq="D",
trainer=Trainer(
learning_rate=6e-4,
#clip_gradient=1.0,
epochs=12, #10
num_batches_per_epoch=1000,
batch_size=16
#ctx=mx.context.gpu()
))
# In[ ]:
if SUBMISSION:
predictor = estimator.train(train_ds)
else:
predictor = estimator.train(train_ds, test_ds)
# # Analyze forcasts - Errors and Visual inspection
#
# In[ ]:
train_data = common.FileDataset(
"/home/root/mxnetTS/GluonTS-Learning-in-Action/chapter-2/data/train",
freq="H")
test_data = common.FileDataset(
"/home/root/mxnetTS/GluonTS-Learning-in-Action/chapter-2/data/val",
freq="H")
estimator = deepar.DeepAREstimator(prediction_length=24,
context_length=100,
use_feat_static_cat=True,
use_feat_dynamic_real=True,
num_parallel_samples=100,
cardinality=[2, 1],
freq="H",
trainer=Trainer(ctx="cpu",
epochs=200,
learning_rate=1e-3))
predictor = estimator.train(training_data=train_data)
for test_entry, forecast in zip(test_data, predictor.predict(test_data)):
to_pandas(test_entry)[-100:].plot(figsize=(12, 5), linewidth=2)
forecast.plot(color='g', prediction_intervals=[50.0, 90.0])
plt.grid(which='both')
plt.legend([
"past observations", "median prediction", "90% prediction interval",
"50% prediction interval"
])
plt.show()
prediction = next(predictor.predict(test_data))
print(prediction.mean)
def __init__(
self,
freq: str,
prediction_length: int,
trainer: Trainer = Trainer(
learning_rate=0.01,
epochs=200,
num_batches_per_epoch=50,
hybridize=False,
),
cardinality: List[int] = [1],
seasonality: Optional[int] = None,
embedding_dimension: int = 5,
num_bins: int = 1024,
hybridize_prediction_net: bool = False,
n_residue=24,
n_skip=32,
dilation_depth: Optional[int] = None,
n_stacks: int = 1,
train_window_length: Optional[int] = None,
temperature: float = 1.0,
act_type: str = "elu",
num_parallel_samples: int = 200,
) -> None:
"""
Model with Wavenet architecture and quantized target.
:param freq:
:param prediction_length:
:param trainer:
:param num_eval_samples:
:param cardinality:
:param embedding_dimension:
:param num_bins: Number of bins used for quantization of signal
:param hybridize_prediction_net:
:param n_residue: Number of residual channels in wavenet architecture
:param n_skip: Number of skip channels in wavenet architecture
:param dilation_depth: number of dilation layers in wavenet architecture.
If set to None, dialation_depth is set such that the receptive length is at
least as long as 2 * seasonality for the frequency and at least
2 * prediction_length.
:param n_stacks: Number of dilation stacks in wavenet architecture
:param train_window_length: Length of windows used for training. This should be
longer than prediction length. Larger values result in more efficient
reuse of computations for convolutions.
:param temperature: Temparature used for sampling from softmax distribution.
For temperature = 1.0 sampling is according to estimated probability.
:param act_type: Activation type used after before output layer.
Can be any of
'elu', 'relu', 'sigmoid', 'tanh', 'softrelu', 'softsign'
"""
super().__init__(trainer=trainer)
self.freq = freq
self.prediction_length = prediction_length
self.cardinality = cardinality
self.embedding_dimension = embedding_dimension
self.num_bins = num_bins
self.hybridize_prediction_net = hybridize_prediction_net
self.n_residue = n_residue
self.n_skip = n_skip
self.n_stacks = n_stacks
self.train_window_length = (train_window_length if train_window_length
is not None else prediction_length)
self.temperature = temperature
self.act_type = act_type
self.num_parallel_samples = num_parallel_samples
seasonality = (_get_seasonality(
self.freq,
{
"H": 7 * 24,
"D": 7,
"W": 52,
"M": 12,
"B": 7 * 5,
"min": 24 * 60,
},
) if seasonality is None else seasonality)
goal_receptive_length = max(2 * seasonality,
2 * self.prediction_length)
if dilation_depth is None:
d = 1
while (WaveNet.get_receptive_field(dilation_depth=d,
n_stacks=n_stacks) <
goal_receptive_length):
d += 1
self.dilation_depth = d
else:
self.dilation_depth = dilation_depth
self.context_length = WaveNet.get_receptive_field(
dilation_depth=self.dilation_depth, n_stacks=n_stacks)
self.logger = logging.getLogger(__name__)
self.logger.info(
f"Using dilation depth {self.dilation_depth} and receptive field length {self.context_length}"
)
def __init__(
self,
freq: str,
prediction_length: int,
add_trend: bool = False,
past_length: Optional[int] = None,
num_periods_to_train: int = 4,
trainer: Trainer = Trainer(epochs=25, hybridize=False),
num_layers: int = 2,
num_cells: int = 40,
cell_type: str = "lstm",
num_eval_samples: int = 100,
dropout_rate: float = 0.1,
use_feat_dynamic_real: bool = False,
use_feat_static_cat: bool = False,
cardinality: Optional[List[int]] = None,
embedding_dimension: Optional[List[int]] = None,
issm: Optional[ISSM] = None,
scaling: bool = True,
time_features: Optional[List[TimeFeature]] = None,
) -> None:
super().__init__(trainer=trainer)
assert (
prediction_length > 0
), "The value of `prediction_length` should be > 0"
assert (
past_length is None or past_length > 0
), "The value of `past_length` should be > 0"
assert num_layers > 0, "The value of `num_layers` should be > 0"
assert num_cells > 0, "The value of `num_cells` should be > 0"
assert (
num_eval_samples > 0
), "The value of `num_eval_samples` should be > 0"
assert dropout_rate >= 0, "The value of `dropout_rate` should be >= 0"
assert (cardinality is not None and use_feat_static_cat) or (
cardinality is None and not use_feat_static_cat
), "You should set `cardinality` if and only if `use_feat_static_cat=True`"
assert cardinality is None or [
c > 0 for c in cardinality
], "Elements of `cardinality` should be > 0"
assert embedding_dimension is None or [
e > 0 for e in embedding_dimension
], "Elements of `embedding_dimension` should be > 0"
self.freq = freq
self.past_length = (
past_length
if past_length is not None
else num_periods_to_train * longest_period_from_frequency_str(freq)
)
self.prediction_length = prediction_length
self.add_trend = add_trend
self.num_layers = num_layers
self.num_cells = num_cells
self.cell_type = cell_type
self.num_sample_paths = num_eval_samples
self.scaling = scaling
self.dropout_rate = dropout_rate
self.use_feat_dynamic_real = use_feat_dynamic_real
self.use_feat_static_cat = use_feat_static_cat
self.cardinality = (
cardinality if cardinality and use_feat_static_cat else [1]
)
self.embedding_dimension = (
embedding_dimension
if embedding_dimension is not None
else [min(50, (cat + 1) // 2) for cat in self.cardinality]
)
self.issm = (
issm
if issm is not None
else CompositeISSM.get_from_freq(freq, add_trend)
)
self.time_features = (
time_features
if time_features is not None
else time_features_from_frequency_str(self.freq)
)
from gluonts.dataset.loader import TrainDataLoader
from gluonts.model.deepar import DeepAREstimator
from gluonts.support.util import get_hybrid_forward_input_names
from gluonts.trainer import Trainer
from gluonts.dataset.repository.datasets import get_dataset
if __name__ == "__main__":
dataset = get_dataset(dataset_name="electricity")
estimator = DeepAREstimator(
prediction_length=dataset.metadata.prediction_length,
freq=dataset.metadata.freq,
trainer=Trainer(learning_rate=1e-3,
epochs=50,
num_batches_per_epoch=100),
)
# instead of calling `train` method, we call `train_model` that returns more things including the training model
train_output = estimator.train_model(dataset.train)
# we construct a data_entry that contains 500 random windows
batch_size = 500
num_samples = 100
training_data_loader = TrainDataLoader(
dataset=dataset.train,
transform=train_output.transformation,
batch_size=batch_size,
num_batches_per_epoch=estimator.trainer.num_batches_per_epoch,
ctx=mx.cpu(),
def test_appendix_c():
"""
Test GluonTS paper examples from arxiv paper:
https://arxiv.org/abs/1906.05264
Appendix C
"""
from typing import List
from mxnet import gluon
from gluonts.model.estimator import GluonEstimator
from gluonts.model.predictor import Predictor, RepresentableBlockPredictor
from gluonts.trainer import Trainer
from gluonts.transform import (
InstanceSplitter,
Transformation,
ExpectedNumInstanceSampler,
)
from gluonts.core.component import validated
from gluonts.support.util import copy_parameters
class MyTrainNetwork(gluon.HybridBlock):
def __init__(self, prediction_length, cells, act_type, **kwargs):
super().__init__(**kwargs)
self.prediction_length = prediction_length
with self.name_scope():
# Set up a network that predicts the target
self.nn = gluon.nn.HybridSequential()
for c in cells:
self.nn.add(gluon.nn.Dense(units=c, activation=act_type))
self.nn.add(
gluon.nn.Dense(units=self.prediction_length,
activation=act_type))
def hybrid_forward(self, F, past_target, future_target):
prediction = self.nn(past_target)
# calculate L1 loss to learn the median
return (prediction - future_target).abs().mean(axis=-1)
class MyPredNetwork(MyTrainNetwork):
# The prediction network only receives
# past target and returns predictions
def hybrid_forward(self, F, past_target):
prediction = self.nn(past_target)
return prediction.expand_dims(axis=1)
class MyEstimator(GluonEstimator):
@validated()
def __init__(
self,
freq: str,
prediction_length: int,
act_type: str = "relu",
context_length: int = 30,
cells: List[int] = [40, 40, 40],
trainer: Trainer = Trainer(epochs=10),
) -> None:
super().__init__(trainer=trainer)
self.freq = freq
self.prediction_length = prediction_length
self.act_type = act_type
self.context_length = context_length
self.cells = cells
def create_training_network(self) -> MyTrainNetwork:
return MyTrainNetwork(
prediction_length=self.prediction_length,
cells=self.cells,
act_type=self.act_type,
)
def create_predictor(
self,
transformation: Transformation,
trained_network: gluon.HybridBlock,
) -> Predictor:
prediction_network = MyPredNetwork(
prediction_length=self.prediction_length,
cells=self.cells,
act_type=self.act_type,
)
copy_parameters(trained_network, prediction_network)
return RepresentableBlockPredictor(
input_transform=transformation,
prediction_net=prediction_network,
batch_size=self.trainer.batch_size,
freq=self.freq,
prediction_length=self.prediction_length,
ctx=self.trainer.ctx,
)
def create_transformation(self):
# Model specific input transform
# Here we use a transformation that randomly
# selects training samples from all series.
return InstanceSplitter(
target_field=FieldName.TARGET,
is_pad_field=FieldName.IS_PAD,
start_field=FieldName.START,
forecast_start_field=FieldName.FORECAST_START,
train_sampler=ExpectedNumInstanceSampler(num_instances=1),
past_length=self.context_length,
future_length=self.prediction_length,
)
from gluonts.trainer import Trainer
from gluonts.evaluation import Evaluator
from gluonts.evaluation.backtest import backtest_metrics
dataset_info, train_ds, test_ds = constant_dataset()
meta = dataset_info.metadata
estimator = MyEstimator(
freq=meta.freq,
prediction_length=1,
trainer=Trainer(epochs=1, batch_size=32),
)
predictor = estimator.train(train_ds)
evaluator = Evaluator(quantiles=(0.1, 0.5, 0.9))
agg_metrics, item_metrics = backtest_metrics(
train_dataset=train_ds,
test_dataset=test_ds,
forecaster=predictor,
evaluator=evaluator,
)
from gluonts.model.simple_feedforward import SimpleFeedForwardEstimator
from gluonts.trainer import Trainer
from gluonts.dataset.loader import TrainDataLoader
import numpy as np
from gluonts.support.util import get_hybrid_forward_input_names
from gluonts.evaluation.backtest import make_evaluation_predictions
from gluonts.evaluation import Evaluator
from dataset import dataset
estimator = SimpleFeedForwardEstimator(
num_hidden_dimensions=[10],
prediction_length=dataset.metadata.prediction_length,
context_length=100,
freq=dataset.metadata.freq,
trainer=Trainer(ctx="cpu",
epochs=5,
learning_rate=1e-3,
num_batches_per_epoch=100))
net = estimator.create_training_network()