def updateTrackInfoToVersion15(genome, trackName):
"genome trackName"
if isinstance(trackName, str):
trackName = qcf.convertTNstrToTNListFormat(trackName)
ti = TrackInfo(genome, trackName)
ti.preProcOverlapRules = []
trackFormatList = []
for allowOverlaps in [True, False]:
from gold.origdata.PreProcessUtils import PreProcessUtils
if PreProcessUtils.preProcFilesExist(genome, trackName, allowOverlaps):
ti.preProcOverlapRules.append(allowOverlaps)
if PreProcessUtils.mergedPreProcFilesExist(genome, trackName, allowOverlaps):
mergedPrefixInfoDict = PreProcessUtils.getMergedPrefixInfoDict(genome, trackName, allowOverlaps)
ti.mergedPrefixInfoDictPerOverlapRule[allowOverlaps] = mergedPrefixInfoDict
trackFormatList.append(TrackFormat.createInstanceFromPrefixInfoDict(mergedPrefixInfoDict))
if trackFormatList:
ti.trackFormatHash = hash(tuple(trackFormatList))
if not ti.geSourceVersion:
ti.geSourceVersion = ti.preProcVersion
ti.preProcVersion = '1.5'
origPath = qcf.createOrigPath(genome, trackName)
if os.path.exists(origPath):
ti.id = ti.constructIdFromPath(genome, qcf.createOrigPath(genome, trackName), ti.geSourceVersion, ti.preProcVersion)
print ti.id, ti.preProcOverlapRules, ti.mergedPrefixInfoDictPerOverlapRule, ti.trackFormatHash, ti.geSourceVersion, ti.preProcVersion
ti.store()
print Track(trackName).getUniqueKey(genome)
def _calcTrackFormatHash(mergedPrefixInfoDictPerOverlapRule):
trackFormatList = []
for allowOverlaps in mergedPrefixInfoDictPerOverlapRule.keys():
mergedPrefixInfoDict = mergedPrefixInfoDictPerOverlapRule[
allowOverlaps]
trackFormatList.append(
TrackFormat.createInstanceFromPrefixInfoDict(
mergedPrefixInfoDict))
trackFormatHash = hash(tuple(trackFormatList))
return trackFormatHash