def setup_image(self, i, j, win):
p = ImagePlot(win, xlabel=self.xlabel, ylabel=self.ylabel,
zlabel=self.zlabel, yreverse=self.yreverse)
self.main_widget = p
win.add_plot(i, j, p)
for item in self.images+self.plots:
if item in self.images:
item.set_color_map(self.colormap)
p.add_item(item)
if self.legend_position is not None:
p.add_item(make.legend(self.legend_position))
return p
def setup_image(self, i, j, win):
p = ImagePlot(win,
xlabel=self.xlabel,
ylabel=self.ylabel,
zlabel=self.zlabel,
yreverse=self.yreverse)
self.main_widget = p
win.add_plot(i, j, p)
for item in self.images + self.plots:
if item in self.images:
item.set_color_map(self.colormap)
p.add_item(item)
if self.legend_position is not None:
p.add_item(make.legend(self.legend_position))
return p
def test_adding_to_plot(self):
s = ScanningParam()
a = AxisParam()
a.length = 5
a.increment = 0.5
a.start = -1.5
a.unit = 'nm'
s.axis1 = a
s.axis2 = a
data = np.random.rand(5, 5)
m = Measurement(data, s)
image = ThothImageItem(m)
from guiqwt.image import ImagePlot
plot = ImagePlot(title="Test")
plot.add_item(image)
plot.show()
def test_adding_to_plot(self):
s = ScanningParam()
a = AxisParam()
a.length = 5
a.increment = 0.5
a.start = -1.5
a.unit = 'nm'
s.axis1 = a
s.axis2 = a
data = np.random.rand(5,5)
m = Measurement(data,s)
image = ThothImageItem(m)
from guiqwt.image import ImagePlot
plot = ImagePlot(title="Test")
plot.add_item(image)
plot.show()
class ImageScreen(QWidget):
"""
Hum hum hum
"""
def __init__(self, parent, x, y, data, sizex, sizey):
QWidget.__init__(self, parent)
self.setMinimumSize(sizex, sizey)
self.x = x
self.y = y
self.data = data
#---guiqwt related attributes:
self.plot = None
self.image = None
self.ROI = None
self.background = None
#---
self.setup_widget()
def setup_widget(self):
self.plot = ImagePlot(self)
self.image = make.xyimage(self.x, self.y, self.data, colormap='jet')
self.plot.add_item(self.image)
self.plot.set_antialiasing(True)
vlayout = QVBoxLayout()
vlayout.addWidget(self.plot)
self.setLayout(vlayout)
#self.plot.adjustSize()
def update_image(self):
self.image.x = self.x
self.image.y = self.y
self.image.data = self.data
self.plot.replot()
pass
class ImageScreen(QWidget):
"""
Hum hum hum
"""
def __init__(self, parent, x, y, data):
QWidget.__init__(self, parent)
#self.setMinimumSize(sizex, sizey)
self.x = x
self.y = y
self.data = data
self.level_xy = [[[0, 0], [0, 0]] for i in range(8)]
#---guiqwt related attributes:
self.plot = None
self.image = None
self.ROI = None
self.background = None
self.levels = []
#---
self.setup_widget()
def setup_widget(self):
self.plot = ImagePlot(self)
self.image = make.xyimage(self.x, self.y, self.data, colormap='jet')
self.plot.add_item(self.image)
self.plot.set_antialiasing(True)
#--- levels ?
for i in range(8):
x = self.level_xy[i][0]
y = self.level_xy[i][1]
self.levels.append(make.curve(x, y, color="w"))
self.plot.add_item(self.levels[-1])
#----------------------
vlayout = QVBoxLayout()
vlayout.addWidget(self.plot)
self.setLayout(vlayout)
self.plot.adjustSize()
def update_image(self):
self.image.x = self.x
self.image.y = self.y
self.image.data = self.data
for i in range(8):
x = self.level_xy[i][0]
y = self.level_xy[i][1]
self.levels[i].x = x
self.levels[i].y = y
self.plot.replot()
pass
def update_contour(self):
for i in range(8):
x = self.level_xy[i][0]
y = self.level_xy[i][1]
self.levels[i].set_data(x, y)
self.plot.replot()
pass
def reset_contour(self):
self.level_xy = [[[0, 0], [0, 0]] for i in range(8)]
for i in range(8):
x = self.level_xy[i][0]
y = self.level_xy[i][1]
self.levels[i].set_data(x, y)
self.plot.replot()
pass
class SlindingTimeFreq(QWidget):
def __init__(self, threadacquisition=None, parent = None,):
super(SlindingTimeFreq, self).__init__(parent)
self.threadacquisition = threadacquisition
self.mainlayout = QHBoxLayout()
self.setLayout(self.mainlayout)
v = QVBoxLayout()
self.mainlayout.addLayout(v)
self.combo = QComboBox()
v.addWidget(self.combo)
self.plot = ImagePlot(yreverse=False, lock_aspect_ratio=False,)
v.addWidget(self.plot)
v = QVBoxLayout()
self.mainlayout.addLayout(v)
self.spinboxes = { }
for param, value in {'xsize':2., 'f_start':1., 'f_stop':80., 'deltafreq' : .5, 'f0':2.5}.items():
spin = QDoubleSpinBox( decimals = 1, singleStep = 0.1, value = value, minimum = 0., maximum = np.inf)
self.spinboxes[spin] = param
v.addWidget(QLabel(param))
v.addWidget(spin)
v.addSpacing(10)
spin.valueChanged.connect(self.paramChanged)
v.addStretch(4)
self.image = None
self.xsize = 2.
self.paramsTimeFreq = dict(
f_start=1.,
f_stop = 80.,
deltafreq = .5,
sampling_rate = 1./self.threadacquisition.samplingInterval,
f0 = 2.5,
normalisation = 0.,
)
self.recreateThread = True
self.isComputing = False
self.initializeTimeFreq()
self.timer = QTimer(singleShot = False, interval = 200)
self.timer.timeout.connect(self.refresh)
self.timer.start()
def initializeTimeFreq(self):
self.plot.del_all_items()
self.len_wavelet = int(self.xsize/self.threadacquisition.samplingInterval)
self.wf = generate_wavelet_fourier(len_wavelet= self.len_wavelet, ** self.paramsTimeFreq).transpose()
self.win = hamming(self.len_wavelet)
self.map = zeros(self.wf.shape)
self.image = make.image(self.map, title='TimeFreq',interpolation ='nearest')
self.plot.add_item(self.image)
p = self.paramsTimeFreq
self.freqs = arange(p['f_start'],p['f_stop'],p['deltafreq'])
def paramChanged(self):
spin = self.sender()
name = self.spinboxes[spin]
if name =='xsize':
self.xsize = spin.value()
self.xsize = min(30., self.xsize)
else:
self.paramsTimeFreq[name] = spin.value()
self.initializeTimeFreq()
self.recreateThread = True
self.refresh()
def refresh(self):
if self.combo.count()==0:
self.combo.addItems(self.threadacquisition.channelNames)
channel = self.combo.currentIndex ()
if self.isComputing:
return
sig = self.threadacquisition.buffer[-self.len_wavelet:, channel]
if sig.size != self.len_wavelet:
print 'xsize too BIG!!', sig.size, self.len_wavelet
return
self.isComputing = True
if self.recreateThread:
self.thread = ThreadComputeTF(sig, self.wf, self.win, parent = self)
self.thread.finished.connect(self.mapComputed)
self.recreateThread = False
else:
self.thread.sig = sig
self.thread.start()
def mapComputed(self):
xaxis, yaxis = self.plot.get_active_axes()
self.plot.setAxisScale(yaxis, self.freqs[0], self.freqs[-1])
self.plot.setAxisScale(xaxis,-self.xsize, 0.)
self.image.set_ydata(self.freqs[0], self.freqs[-1])
self.image.set_xdata(-self.xsize, 0.)
self.image.set_data(self.map)
self.plot.replot()
self.isComputing = False