def test_label_not_in_namespace(self, h5preserve_experiment_repr,
no_loader_experiment_registry):
registries = RegistryContainer(no_loader_experiment_registry)
with pytest.raises(RuntimeError) as excinfo:
registries.load(h5preserve_experiment_repr)
assert ("Label Experiment not in namespace experiment." == str(
excinfo.value))
def test_invalid_dumper(self, invalid_dumper_experiment_registry,
experiment_data):
registries = RegistryContainer(invalid_dumper_experiment_registry)
with pytest.raises(TypeError) as excinfo:
registries._obj_to_h5preserve(experiment_data)
assert ("Dumper for Experiment with version 1 returned incorrect type."
== str(excinfo.value))
def test_not_loadable(self, experiment_data):
registries = RegistryContainer()
with pytest.raises(TypeError) as excinfo:
registries.load(experiment_data)
assert (
"<class 'conftest.Experiment'> is not something that can be loaded." == str(excinfo.value)
)
def test_not_loadable(self, experiment_data):
registries = RegistryContainer()
with pytest.raises(TypeError) as excinfo:
registries.load(experiment_data)
assert (
"<class 'conftest.Experiment'> is not something that can be loaded."
== str(excinfo.value))
def test_not_dumpable(self, empty_registry, experiment_data):
registries = RegistryContainer(empty_registry)
with pytest.raises(TypeError) as excinfo:
registries._obj_to_h5preserve(experiment_data)
assert (
"<class 'conftest.Experiment'> is not something that can be dumped."
== str(excinfo.value))
def test_label_not_in_namespace(
self, h5preserve_experiment_repr, no_loader_experiment_registry
):
registries = RegistryContainer(no_loader_experiment_registry)
with pytest.raises(RuntimeError) as excinfo:
registries.load(h5preserve_experiment_repr)
assert (
"Label Experiment not in namespace experiment." == str(excinfo.value)
)
def test_no_version(self, experiment_registry, experiment_data):
registries = RegistryContainer(experiment_registry)
registries.lock_version(type(experiment_data), 10)
with pytest.raises(RuntimeError) as excinfo:
registries._obj_to_h5preserve(experiment_data)
assert (
"<class 'conftest.Experiment'> does not have version 10." == str(
excinfo.value))
def test_ndarray(self, empty_registry):
registries = RegistryContainer(empty_registry)
ndarray = np.random.rand(1000)
assert all(ndarray == registries.dump(ndarray))
def test_h5py_external_link(self, empty_registry):
registries = RegistryContainer(empty_registry)
external_link = ExternalLink("example.hdf5", "/example")
assert external_link == registries.dump(external_link)
def test_h5py_soft_link(self, empty_registry):
registries = RegistryContainer(empty_registry)
soft_link = SoftLink("/example")
assert soft_link == registries.dump(soft_link)
def test_h5py_dataset(self, empty_registry, h5py_file_with_dataset):
registries = RegistryContainer(empty_registry)
dataset = h5py_file_with_dataset["example"]
assert dataset == registries.dump(dataset)
def test_h5py_group(self, empty_registry, h5py_file_with_group):
registries = RegistryContainer(empty_registry)
group = h5py_file_with_group["example"]
assert group == registries.dump(group)
def test_h5py_dataset(self, empty_registry, h5py_file_with_dataset):
registries = RegistryContainer(empty_registry)
dataset = h5py_file_with_dataset["example"]
assert dataset == registries.dump(dataset)
def test_h5py_external_link(self, empty_registry):
registries = RegistryContainer(empty_registry)
external_link = ExternalLink("example.hdf5", "/example")
assert external_link == registries.dump(external_link)
def test_version(self, experiment_registry, experiment_data):
registries = RegistryContainer(experiment_registry)
registries.lock_version(type(experiment_data), 1)
assert registries._obj_to_h5preserve(experiment_data)._version == 1
def test_none(self, None_version_experiment_registry, experiment_data):
registries = RegistryContainer(None_version_experiment_registry)
assert registries._obj_to_h5preserve(experiment_data)._version == None
def test_version(self, experiment_registry, experiment_data):
registries = RegistryContainer(experiment_registry)
registries.lock_version(type(experiment_data), 1)
assert registries._obj_to_h5preserve(experiment_data)._version == 1
def test_ndarray(self, empty_registry):
registries = RegistryContainer(empty_registry)
ndarray = np.random.rand(1000)
assert all(ndarray == registries.dump(ndarray))
def test_not_dumpable(self, empty_registry, experiment_data):
registries = RegistryContainer(empty_registry)
with pytest.raises(TypeError) as excinfo:
registries._obj_to_h5preserve(experiment_data)
assert "<class 'conftest.Experiment'> is not something that can be dumped." == str(excinfo.value)
def test_invalid_dumper(self, invalid_dumper_experiment_registry, experiment_data):
registries = RegistryContainer(invalid_dumper_experiment_registry)
with pytest.raises(TypeError) as excinfo:
registries._obj_to_h5preserve(experiment_data)
assert "Dumper for Experiment with version 1 returned incorrect type." == str(excinfo.value)
def test_no_version(self, experiment_registry, experiment_data):
registries = RegistryContainer(experiment_registry)
registries.lock_version(type(experiment_data), 10)
with pytest.raises(RuntimeError) as excinfo:
registries._obj_to_h5preserve(experiment_data)
assert "<class 'conftest.Experiment'> does not have version 10." == str(excinfo.value)
def test_h5py_soft_link(self, empty_registry):
registries = RegistryContainer(empty_registry)
soft_link = SoftLink("/example")
assert soft_link == registries.dump(soft_link)
def test_none(self, None_version_experiment_registry, experiment_data):
registries = RegistryContainer(None_version_experiment_registry)
assert registries._obj_to_h5preserve(experiment_data)._version == None
def test_hardlink(self, empty_registry):
registries = RegistryContainer(empty_registry)
hard_link = HardLink("/example")
assert hard_link == registries.dump(hard_link)
def obj_registry(request):
return {
"registries": RegistryContainer(request.param[0]),
"dumpable_object": request.param[1]
}
def test_h5py_group(self, empty_registry, h5py_file_with_group):
registries = RegistryContainer(empty_registry)
group = h5py_file_with_group["example"]
assert group == registries.dump(group)
def obj_registry_with_none(request):
return {
"registries": RegistryContainer(request.param[0]),
"dumpable_object": get_fixture_val(request.param[1], request)
}
def test_hardlink(self, empty_registry):
registries = RegistryContainer(empty_registry)
hard_link = HardLink("/example")
assert hard_link == registries.dump(hard_link)