def extract(self, experiment, type, indiv):
noResultVal = ['NA', 'NA', 'NA']
filepath = experiment[2] + os.path.sep + PathConfig.populationFolderNormal + os.path.sep + indiv[0] + "_vox.vxa"
if os.path.isfile(filepath):
vd = VoxelData(filepath)
relCounts = vd.getRelCounts()
if not relCounts:
return noResultVal
return [relCounts["fat"], relCounts["muscle"], relCounts["bone"]]
else:
return noResultVal
def extract(self, experiment, type, indiv):
noResultVal = ["NA", "NA", "NA"]
filepath = GetAltFile.getAltPopFile(experiment, type, indiv)
if filepath != False:
vd = VoxelData(filepath)
relCounts = vd.getRelCounts()
if not relCounts:
return noResultVal
return [relCounts["fat"], relCounts["muscle"], relCounts["bone"]]
else:
return noResultVal
