def test_mean_stddev():
Hs = []
for i in range(1000):
H, M, fpp = htest.h_test(np.random.random(100))
Hs.append(H)
print np.mean(Hs), np.std(Hs)
assert np.abs(np.mean(Hs)-2.51)<0.1
assert np.abs(np.std(Hs)-2.51)<0.3
def test_mean_stddev():
Hs = []
for i in range(1000):
H, M, fpp = htest.h_test(np.random.random(100))
Hs.append(H)
print np.mean(Hs), np.std(Hs)
assert np.abs(np.mean(Hs) - 2.51) < 0.1
assert np.abs(np.std(Hs) - 2.51) < 0.3
def F(x):
return htest.h_test(x)[2]
def test_compare_zm2():
data = np.random.random(1000)
H, M, fpp = htest.h_test(data)
Z, zm2fpp = zm2.zm2(data, M)
assert np.abs(Z - (H+4*M-4))<1e-8
assert fpp>zm2fpp
def test_non_null():
H, M, fpp = htest.h_test(np.random.random(1000)/2)
assert fpp<0.01
def F(x):
return htest.h_test(x)[2]
def test_compare_zm2():
data = np.random.random(1000)
H, M, fpp = htest.h_test(data)
Z, zm2fpp = zm2.zm2(data, M)
assert np.abs(Z - (H + 4 * M - 4)) < 1e-8
assert fpp > zm2fpp
def test_non_null():
H, M, fpp = htest.h_test(np.random.random(1000) / 2)
assert fpp < 0.01