def main(args):
if sys.version_info[0] != 3:
print("This script requires Python 3")
exit()
gold_pos = io.read_input_file(args[0])[1]
sys_pos = io.read_input_file(args[1])[1]
v = get_v(gold_pos, sys_pos)
print("Value of V is %f\n" % v)
def main(argv):
if len(argv) < 1:
sys.stderr.write("One required argument: <Config file>\n")
sys.exit(-1)
config = configparser.ConfigParser()
config.read(argv[0])
input_file = config.get("io", "input_file")
out_dir = config.get("io", "output_dir")
if not os.path.exists(out_dir):
sys.stderr.write("Creating non-existent output directory.")
os.makedirs(out_dir)
with open(out_dir + "/config.ini", "w") as configfile:
config.write(configfile)
## Read in input file to get sequence for X
(pos_seq, word_seq) = io.read_input_file(input_file)
num_types = max(map(max, word_seq)) + 1
params = read_params(config)
params["h"] = init_emission_base(num_types)
(samples, stats) = ihmm.sample_beam(word_seq, params, lambda x: io.write_output(x, None, config, pos_seq))
io.write_output(samples[-1], stats, config, pos_seq)
def main(argv):
if len(argv) < 1:
sys.stderr.write(
"One required argument: <Config file|Resume directory>\n")
sys.exit(-1)
path = argv[0]
if not os.path.exists(path):
sys.stderr.write("Input file/dir does not exist!")
sys.exit(-1)
config = configparser.ConfigParser()
pickle_file = None
if os.path.isdir(path):
## Resume mode
config.read(path + "/config.ini")
pickle_file = path + "/sample.obj"
else:
config.read(argv[0])
out_dir = config.get('io', 'output_dir')
if not os.path.exists(out_dir):
sys.stderr.write("Creating non-existent output directory.")
os.makedirs(out_dir)
with open(out_dir + "/config.ini", 'w') as configfile:
config.write(configfile)
input_file = config.get('io', 'input_file')
## Read in input file to get sequence for X
(pos_seq, word_seq) = io.read_input_file(input_file)
num_types = max(map(max, word_seq)) + 1
params = read_params(config)
params['h'] = init_emission_base(num_types)
(samples, stats) = ihmm.sample_beam(
word_seq, params, lambda x: io.write_output(x, None, config, pos_seq),
pickle_file)
io.write_output(samples[-1], stats, config, pos_seq)
def main(argv):
if len(argv) < 1:
sys.stderr.write("One required argument: <Config file|Resume directory>\n")
sys.exit(-1)
path = argv[0]
if not os.path.exists(path):
sys.stderr.write("Input file/dir does not exist!")
sys.exit(-1)
config = configparser.ConfigParser()
pickle_file = None
if os.path.isdir(path):
## Resume mode
config.read(path + "/config.ini")
pickle_file = path + "/sample.obj"
else:
config.read(argv[0])
out_dir = config.get('io', 'output_dir')
if not os.path.exists(out_dir):
sys.stderr.write("Creating non-existent output directory.")
os.makedirs(out_dir)
with open(out_dir + "/config.ini", 'w') as configfile:
config.write(configfile)
input_file = config.get('io', 'input_file')
## Read in input file to get sequence for X
(pos_seq, word_seq) = io.read_input_file(input_file)
num_types = max(map(max,word_seq)) + 1
params = read_params(config)
params['h'] = init_emission_base(num_types)
(samples, stats) = ihmm.sample_beam(word_seq, params, lambda x: io.write_output(x, None, config, pos_seq), pickle_file)
io.write_output(samples[-1], stats, config, pos_seq)
