def test3DProjectLocalData(self, serializer, empty_project_file, graph):
empty_project_file.create_group("DataSelection")
empty_project_file["DataSelection"].create_group("local_data")
empty_project_file["DataSelection/local_data"].create_dataset(
"dataset1", data=self.imgData3Dc)
info = ProjectInternalDatasetInfo(
inner_path="DataSelection/local_data/dataset1",
project_file=empty_project_file)
projectInternalData = info.get_provider_slot(graph=graph)[...].wait()
assert projectInternalData.shape == self.imgData3Dc.shape, (
projectInternalData.shape, self.imgData3Dc.shape)
assert (projectInternalData == self.imgData3Dc).all()
for fileName in self.generatedImages3Dc:
filesystem_info = FilesystemDatasetInfo(filePath=fileName)
inner_path = filesystem_info.importAsLocalDataset(
project_file=empty_project_file)
info = ProjectInternalDatasetInfo(project_file=empty_project_file,
inner_path=inner_path)
projectInternalData = info.get_provider_slot(
graph=graph)[...].wait()
assert projectInternalData.shape == self.imgData3Dc.shape, (
projectInternalData.shape,
self.imgData3Dc.shape,
)
assert (projectInternalData == self.imgData3Dc).all()
def internal_datasetinfo(serializer, png_image) -> ProjectInternalDatasetInfo:
project_file = serializer.topLevelOperator.ProjectFile.value
filesystem_info = FilesystemDatasetInfo(filePath=png_image.as_posix())
inner_path = filesystem_info.importAsLocalDataset(
project_file=project_file)
info = ProjectInternalDatasetInfo(inner_path=inner_path,
project_file=project_file)
return info
def testProjectLocalData(self, serializer, empty_project_file, graph):
for fileName in self.generatedImages2Dc:
# For some reason vigra saves 2D+c data compressed in gifs, so skip!
if Path(fileName).suffix in self.compressedExtensions + [".gif"]:
continue
filesystem_info = FilesystemDatasetInfo(filePath=fileName)
# From project
inner_path = filesystem_info.importAsLocalDataset(project_file=empty_project_file)
info = ProjectInternalDatasetInfo(project_file=empty_project_file, inner_path=inner_path)
projectInternalData = info.get_provider_slot(graph=graph)[...].wait()
assert projectInternalData.shape == self.imgData2Dc.shape, (
projectInternalData.shape,
self.imgData2Dc.shape,
)
assert (projectInternalData == self.imgData2Dc).all()
