def test_load_eid_hierarchy():
eidos_ont = os.path.join(os.path.dirname(os.path.abspath(__file__)),
'../sources/eidos/eidos_ontology.rdf')
eidos_ns = 'https://github.com/clulab/eidos/wiki/JSON-LD/Grounding#'
hm = HierarchyManager(eidos_ont, True, True)
assert hm.isa_closure
eidos_isa = lambda a, b: hm.isa('UN', a, 'UN', b)
assert eidos_isa('UN/events/human/conflict', 'UN/events/human')
assert not eidos_isa('UN/events/human/conflict',
'UN/events/human/human_migration')
assert eidos_isa('UN/entities/human/infrastructure', 'UN/entities')
assert eidos_isa('UN/events/natural_disaster/storm', 'UN/events')
assert not eidos_isa('UN/events', 'UN/events/natural/weather/storm')
# Test case where graph is not given
hm = HierarchyManager(None, True, True)
hm.load_from_rdf_file(eidos_ont)
assert eidos_isa('UN/events/natural_disaster/storm', 'UN/events')
# Test loading from string
with open(eidos_ont, 'r') as fh:
hm = HierarchyManager(None, True, True)
hm.load_from_rdf_string(fh.read())
assert eidos_isa('UN/events/natural_disaster/storm', 'UN/events')
# Test loading from Graph
import rdflib
g = rdflib.Graph()
g.parse(eidos_ont, format='nt')
hm = HierarchyManager(None, True, True)
hm.load_from_rdf_graph(g)
assert eidos_isa('UN/events/natural_disaster/storm', 'UN/events')
def test_load_hume_hierarchy():
hume_ont = os.path.join(os.path.dirname(os.path.abspath(__file__)),
'../sources/hume/hume_ontology.rdf')
hm = HierarchyManager(hume_ont, True, True)
assert hm.isa_closure
hume_isa = lambda a, b: hm.isa('HUME', a, 'HUME', b)
assert hume_isa('entity/academic_discipline', 'entity')
assert not hume_isa('entity', 'entity/academic_discipline')
assert hume_isa('event/healthcare/human_disease', 'event/healthcare')
def test_load_sofia_hierarchy():
sofia_ont = os.path.join(os.path.dirname(os.path.abspath(__file__)),
'../sources/sofia/sofia_ontology.rdf')
hm = HierarchyManager(sofia_ont, True, True)
assert hm.isa_closure
sofia_isa = lambda a, b: hm.isa('SOFIA', a, 'SOFIA', b)
assert sofia_isa('Accessibility/Accessibility', 'Accessibility')
assert not sofia_isa('Movement/Transportation', 'Movement/Human_Migration')
assert sofia_isa('Movement/Human_Migration', 'Movement')
def test_load_sofia_hierarchy():
sofia_ont = os.path.join(os.path.dirname(os.path.abspath(__file__)),
'../sources/sofia/sofia_ontology.rdf')
hm = HierarchyManager(sofia_ont, True, True)
assert hm.isa_closure
sofia_isa = lambda a, b: hm.isa('SOFIA', a, 'SOFIA', b)
assert sofia_isa('Accessibility/Accessibility', 'Accessibility')
assert not sofia_isa('Movement/Transportation', 'Movement/Human_Migration')
assert sofia_isa('Movement/Human_Migration', 'Movement')
def test_load_trips_hierarchy():
trips_ont = os.path.join(os.path.dirname(os.path.abspath(__file__)),
'../sources/cwms/trips_ontology.rdf')
hm = HierarchyManager(trips_ont, True, True)
assert hm.isa_closure
trips_isa = lambda a, b: hm.isa('CWMS', a, 'CWMS', b)
assert trips_isa('ONT::TRUCK', 'ONT::VEHICLE')
assert not trips_isa('ONT::VEHICLE', 'ONT::TRUCK')
assert trips_isa('ONT::MONEY', 'ONT::PHYS-OBJECT')
assert trips_isa('ONT::TABLE', 'ONT::MANUFACTURED-OBJECT')
def test_load_hume_hierarchy():
hume_ont = os.path.join(os.path.dirname(os.path.abspath(__file__)),
'../sources/hume/hume_ontology.rdf')
hm = HierarchyManager(hume_ont, True, True)
assert hm.isa_closure
hume_isa = lambda a, b: hm.isa('HUME', a, 'HUME', b)
assert hume_isa('entity/academic_discipline', 'entity')
assert not hume_isa('entity', 'entity/academic_discipline')
assert hume_isa('event/healthcare/human_disease',
'event/healthcare')
def test_load_trips_hierarchy():
trips_ont = os.path.join(os.path.dirname(os.path.abspath(__file__)),
'../sources/cwms/trips_ontology.rdf')
hm = HierarchyManager(trips_ont, True, True)
assert hm.isa_closure
trips_isa = lambda a, b: hm.isa('CWMS', a, 'CWMS', b)
assert trips_isa('ONT::TRUCK', 'ONT::VEHICLE')
assert not trips_isa('ONT::VEHICLE', 'ONT::TRUCK')
assert trips_isa('ONT::MONEY', 'ONT::PHYS-OBJECT')
assert trips_isa('ONT::TABLE', 'ONT::MANUFACTURED-OBJECT')
def test_load_eidos_hierarchy():
eidos_ont = os.path.join(os.path.dirname(os.path.abspath(__file__)),
'../sources/eidos/eidos_ontology.rdf')
eidos_ns = 'https://github.com/clulab/eidos/wiki/JSON-LD/Grounding#'
hm = HierarchyManager(eidos_ont, True, True)
assert hm.isa_closure
eidos_isa = lambda a, b: hm.isa('UN', a, 'UN', b)
assert eidos_isa('UN/events/human/conflict', 'UN/events/human')
assert not eidos_isa('UN/events/human/conflict',
'UN/events/human/human_migration')
assert eidos_isa('UN/entities/human/infrastructure', 'UN/entities')
assert eidos_isa('UN/events/natural_disaster/storm', 'UN/events')
assert not eidos_isa('UN/events', 'UN/events/natural/weather/storm')
def test_load_eidos_hierarchy():
eidos_ont = os.path.join(os.path.dirname(os.path.abspath(__file__)),
'../sources/eidos/eidos_ontology.rdf')
eidos_ns = 'https://github.com/clulab/eidos/wiki/JSON-LD/Grounding#'
hm = HierarchyManager(eidos_ont, True, True)
assert hm.isa_closure
eidos_isa = lambda a, b: hm.isa('EIDOS', a, 'EIDOS', b)
assert eidos_isa('events/human/conflict/war', 'events/human/conflict')
assert not eidos_isa('events/human/conflict/war',
'events/human/human_migration/migration')
assert eidos_isa('entities/measurement/distance/meter',
'entities/measurement')
assert eidos_isa('events/natural/weather/storm/tornado', 'events')
assert not eidos_isa('events', 'events/natural/weather/storm/tornado')
def test_load_eid_hierarchy():
eidos_ont = os.path.join(os.path.dirname(os.path.abspath(__file__)),
'../sources/eidos/eidos_ontology.rdf')
eidos_ns = 'https://github.com/clulab/eidos/wiki/JSON-LD/Grounding#'
hm = HierarchyManager(eidos_ont, True, True)
assert hm.isa_closure
eidos_isa = lambda a, b: hm.isa('UN', a, 'UN', b)
assert eidos_isa('UN/events/human/conflict',
'UN/events/human')
assert not eidos_isa('UN/events/human/conflict',
'UN/events/human/human_migration')
assert eidos_isa('UN/entities/human/infrastructure',
'UN/entities')
assert eidos_isa('UN/events/natural_disaster/storm',
'UN/events')
assert not eidos_isa('UN/events',
'UN/events/natural/weather/storm')
# Test case where graph is not given
hm = HierarchyManager(None, True, True)
hm.load_from_rdf_file(eidos_ont)
assert eidos_isa('UN/events/natural_disaster/storm',
'UN/events')
# Test loading from string
with open(eidos_ont, 'r') as fh:
hm = HierarchyManager(None, True, True)
hm.load_from_rdf_string(fh.read())
assert eidos_isa('UN/events/natural_disaster/storm',
'UN/events')
# Test loading from Graph
import rdflib
g = rdflib.Graph()
g.parse(eidos_ont, format='nt')
hm = HierarchyManager(None, True, True)
hm.load_from_rdf_graph(g)
assert eidos_isa('UN/events/natural_disaster/storm',
'UN/events')
