def flip(self, surface, xbool=True, ybool=False):
"""
Return Surface that is flipped horizontally, vertically, or both.
"""
if xbool and ybool:
at = AffineTransform.getScaleInstance(-1, -1)
at.translate(-surface.getHeight(), -surface.getHeight())
elif xbool:
at = AffineTransform.getScaleInstance(-1, 1)
at.translate(-surface.getWidth(), 0)
elif ybool:
at = AffineTransform.getScaleInstance(1, -1)
at.translate(0, -surface.getHeight())
else:
return surface
op = AffineTransformOp(at, AffineTransformOp.TYPE_BILINEAR)
bimage = op.filter(surface, None)
surf = Surface(bimage)
return surf
def flip(self, surface, xbool=True, ybool=False):
"""
Return Surface that is flipped horizontally, vertically, or both.
"""
if xbool and ybool:
at = AffineTransform.getScaleInstance(-1, -1)
at.translate(-surface.getHeight(), -surface.getHeight())
elif xbool:
at = AffineTransform.getScaleInstance(-1, 1)
at.translate(-surface.getWidth(), 0)
elif ybool:
at = AffineTransform.getScaleInstance(1, -1)
at.translate(0, -surface.getHeight())
else:
return surface
op = AffineTransformOp(at, AffineTransformOp.TYPE_BILINEAR)
bimage = op.filter(surface, None)
surf = Surface(bimage)
return surf
#////////////////////////////
targetImage = images[0]
targetProcessor = targetImage.getProcessor()
targetHeight = float(targetProcessor.getHeight())
targetWidth = float(targetProcessor.getWidth())
#////////////////////////////
# Determine scaling information, scaling target image rois to mass images size.
#////////////////////////////
scalingHeight = float(targetHeight/height)
scalingWidth = float(targetHeight/width)
#////////////////////////////
# Loop through rois in IJ roi manager, scale them, then add to OpenMIMS images
#////////////////////////////
rois = IJRoiManager.getRoisAsArray()
for i in range(len(rois)):
roi = rois[i]
polygon = roi.getPolygon()
at = AfTransform.getScaleInstance(scalingHeight, scalingWidth)
roi = ShapeRoi(at.createTransformedShape(polygon)).shapeToRoi()
MIMSRoiManager.add(roi)
#////////////////////////////
# Update all the images and open the OpenMimsRoi manager
#////////////////////////////
ui.updateAllImages()
MIMSRoiManager.viewManager()
#////////////////////////////
targetImage = images[0]
targetProcessor = targetImage.getProcessor()
targetHeight = float(targetProcessor.getHeight())
targetWidth = float(targetProcessor.getWidth())
#////////////////////////////
# Determine scaling information, scaling target image rois to mass images size.
#////////////////////////////
scalingHeight = float(targetHeight / height)
scalingWidth = float(targetHeight / width)
#////////////////////////////
# Loop through rois in IJ roi manager, scale them, then add to OpenMIMS images
#////////////////////////////
rois = IJRoiManager.getRoisAsArray()
for i in range(len(rois)):
roi = rois[i]
polygon = roi.getPolygon()
at = AfTransform.getScaleInstance(scalingHeight,
scalingWidth)
roi = ShapeRoi(
at.createTransformedShape(polygon)).shapeToRoi()
MIMSRoiManager.add(roi)
#////////////////////////////
# Update all the images and open the OpenMimsRoi manager
#////////////////////////////
ui.updateAllImages()
MIMSRoiManager.viewManager()
