def run(self):
global filepath
gl.log("running MagicDrawAnimator2")
mode = 0
if mode == 0:
#filepath = "c:\\Users\\bclement\\git\\bae\\simulationSnapshot.Scenario_medium_2012.txt"
#filepath = "c:\\Users\\bclement\\Desktop\\large6.txt"
#filepath = "c:\\Users\\bclement\\Desktop\\foo12.txt"
#filepath = "/Users/mjackson/Desktop/testSim.txt"
gl.log("default filepath = %s" % filepath)
filepath = JOptionPane.showInputDialog(
None,
"Select File to Animate",
"Select File",
JOptionPane.PLAIN_MESSAGE,
None,
None,
filepath)
gl.log("reading events from " + filepath)
self.events = []
try: f = open(filepath,"r")
except:
gl.log("can't find file @ %s" % filepath)
return
lastTime = float(0.0)
latestTime = float(-1.0e20)
earliestTime = float(1.0e20)
gl.log( "MagicDrawAnimator2: before simulation, loading events from " + str(filepath) )
print( "MagicDrawAnimator2: before simulation, loading events from " + str(filepath) )
for line in f.readlines():
gl.log("read line = " + line)
x = re.search("(\d*)[^0-9: \t\n\r\f\v]*\s*:\s*\S*\s*(\S*) -> (\S*)\s*(\S*) ==>",line)
y = re.search("(\S*) -> (\S*)\s*(\S*) ==>",line)
if x:
eventTime=float(x.groups()[0])
lastTime = eventTime
action=x.groups()[2]
cid = x.groups()[3]
ctype = x.groups()[1]
#gl.log("%s %s (%s)" % (action.upper(), cid, ctype))
elif y:
eventTime=lastTime
action=y.groups()[1]
cid = y.groups()[2]
ctype = y.groups()[0]
#gl.log("%s %s (%s)" % (action.upper(), cid, ctype))
elif line.startswith("---"):
gl.log(line)
continue
else: continue
#gl.log("%s %s (%s)" % (action.upper(), cid, ctype))
if any([x in cid for x in ["Main"]]):
#gl.log(" ---> Skipping - can't animate Main")
continue
if re.search("(_)?Activity(_.*)?(?!\S)",ctype):
#gl.log(" ---> Skipping - can't animate the Activity object!")
continue
try:
if eventTime < earliestTime:
earliestTime = eventTime
if eventTime > latestTime:
latestTime = eventTime
evt = event(eventTime,action,cid,ctype)
try: self.events.append(evt)
except: gl.log("NESTED ARGHHHHH")
except: gl.log("ARRGHHH")
print( "MagicDrawAnimator2: finished loading events from " + str(filepath) )
gl.log( "MagicDrawAnimator2: finished loading events from " + str(filepath) )
elementsNotEnded = []
try:
mda = MagicDrawAnimatorUtils2.MagicDrawAnimator2()
#self.playEvents(mda)
if self.timeScale == 0.0:
gl.log("*** ZERO TIMESCALE: setting timeScale to 1.0")
self.timeScale = 1.0
if usingDialogs:
JOptionPane.showMessageDialog(self.frame,"Click ok to start simulation.")
#simulatedDuration = (float(latestTime) - float(earliestTime))/ float(self.timeScale)
simulatedDuration = (latestTime - earliestTime)/ self.timeScale
lastTime = earliestTime
elapsedTime = earliestTime
simStartTime = earliestTime / self.timeScale #start at time of first event
elapsedSimTime = simStartTime #start at time of first event
zeroTime = time.time()
except:
exceptionType, exceptionValue, exceptionTraceback = sys.exc_info()
gl.log("*** EXCEPTION:")
messages=traceback.format_exception(exceptionType, exceptionValue, exceptionTraceback)
for message in messages:
gl.log(message)
print("MagicDrawAnimator2: starting simulation with timeScale = " \
+ str(self.timeScale) + "; last event at " + str(latestTime) \
+ " scaling to " + str(simulatedDuration) + " seconds")
gl.log("MagicDrawAnimator2: starting simulation with timeScale = " \
+ str(self.timeScale) + "; last event at " + str(latestTime) \
+ " scaling to " + str(simulatedDuration) + " seconds")
try:
for evt in self.events:
#gl.log("EVENT at " + str(evt.eventTime))
#Sprint("EVENT at " + str(evt.eventTime))
try: timeOfNextEvent = (float(evt.eventTime) + 0.0) / self.timeScale
except:
exceptionType, exceptionValue, exceptionTraceback = sys.exc_info()
gl.log("*** EXCEPTION:")
messages=traceback.format_exception(exceptionType, exceptionValue, exceptionTraceback)
for message in messages:
gl.log(message)
#print("1")
if evt.eventTime != lastTime:
mda.doThePaint() #paint all events occurring at the previous event time
lastTime = float(evt.eventTime)
#print("2")
if timeOfNextEvent > elapsedSimTime:
print("sleeping sim time of next event(" + str(timeOfNextEvent) \
+ ") - elapsed sim time(" + str(elapsedSimTime) + ") = " \
+ str(timeOfNextEvent - elapsedSimTime) + " seconds")
gl.log("sleeping sim time of next event(" + str(timeOfNextEvent) \
+ ") - elapsed sim time(" + str(elapsedSimTime) + ") = " \
+ str(timeOfNextEvent - elapsedSimTime) + " seconds")
if (timeOfNextEvent - elapsedSimTime) > 300:
gl.log("found time jump > 300")
break
time.sleep( timeOfNextEvent - elapsedSimTime )
if "TimeVaryingMap" in evt.componentId:
try: val = evt.action.split("=")[1]
except: val = evt.action
gl.log(" ---> (%s) SETTING VALUE of %s: %s" % (evt.eventTime,evt.componentType,val))
elif evt.componentType.startswith("sig") and "ObjectFlow" in evt.componentId:
sid = evt.componentType.strip("sig")
if "null" in evt.action and sid in elementsNotEnded:
gl.log(" ---> (%s) ENDING SIGNAL %s" % (evt.eventTime,sid))
mda.end(sid)
elementsNotEnded.remove(sid)
elif "null" not in evt.action:
gl.log(" ---> (%s) STARTING SIGNAL %s ==> %s" % (evt.eventTime,sid,evt.action))
txt = ""
try: txt = evt.action.split("=")[1]
except: txt = evt.action
mda.start(sid,txt)
if sid not in elementsNotEnded: elementsNotEnded.append(sid)
elif "start" in evt.action:
gl.log(" ---> (%s) STARTING" % evt.eventTime)
mda.start(evt.componentId)
if evt.componentId not in elementsNotEnded: elementsNotEnded.append(evt.componentId)
elif "end" in evt.action:
gl.log(" ---> (%s) ENDING" % evt.eventTime)
mda.end(evt.componentId)
if evt.componentId in elementsNotEnded: elementsNotEnded.remove(evt.componentId)
t = time.time()
elapsedSimTime = t - zeroTime + simStartTime
elapsedTime = self.timeScale * elapsedSimTime
gl.log("Debug: elapsed time = " + str(elapsedSimTime))
except: self.handleException()
if len(elementsNotEnded)>0:
gl.log("Ending Still-Active Events:")
for e in elementsNotEnded:
gl.log(" ending %s " % e)
try: mda.end(e)
except: self.handleException()
mda.doThePaint()
else: gl.log("All Events Completed")
gl.log("DONE")
elif mode == 1:
e = "_17_0_2_edc0357_1352328158277_34448_20209"
mda = MagicDrawAnimatorUtils2.MagicDrawAnimator2()
gl.log("Starting e (%s)" % e)
mda.start(e,"Porpoise Hork")
mda.doThePaint()
i = 3
while i > 0:
i-=1
gl.log(".")
time.sleep(1)
gl.log("ending e")
mda.end(e)
mda.doThePaint()
elif mode == 2:
try:
mda = MagicDrawAnimatorUtils2.MagicDrawAnimator2()
e = "_17_0_2_edc0357_1352328158277_34448_20209" # in the usePower activity
gl.log("Starting e (%s)" % e)
mda.start(e)
mda.doThePaint()
tb = None
pem = PresentationElementsManager.getInstance()
sm = SessionManager.getInstance()
try:
sym = mda.gimmeTheSymbol(e)
midPoint = sym.getMiddlePoint()
sm.createSession("make box!")
try:
parentPM = sym.getPropertyManager()
c = Color.GREEN
tb = pem.createTextBox(sym,midPoint)
newBounds = Rectangle(15,15)
newBounds.setLocation(midPoint)
pem.reshapeShapeElement(tb,newBounds)
pem.setText(tb," gobblelkajdlfkjakj")
pem.setPresentationElementProperties(tb, parentPM)
sm.closeSession()
except:
sm.cancelSession()
self.handleException()
except: self.handleException()
i = 3
while i > 0:
i-=1
gl.log(".")
time.sleep(1)
gl.log("ending e")
mda.end(e)
if tb:
sm.createSession("deleteBox!")
try:
pem.deletePresentationElement(tb)
sm.closeSession()
except:
sm.cancelSession()
self.handleException()
mda.doThePaint()
except: self.handleException()
def run(self):
global filepath
gl.log("running MagicDrawAnimator2")
mode = 0
if mode == 0:
#filepath = "c:\\Users\\bclement\\git\\bae\\simulationSnapshot.Scenario_medium_2012.txt"
#filepath = "c:\\Users\\bclement\\Desktop\\large6.txt"
#filepath = "c:\\Users\\bclement\\Desktop\\foo12.txt"
#filepath = "/Users/mjackson/Desktop/testSim.txt"
gl.log("default filepath = %s" % filepath)
filepath = JOptionPane.showInputDialog(None,
"Select File to Animate",
"Select File",
JOptionPane.PLAIN_MESSAGE,
None, None, filepath)
gl.log("reading events from " + filepath)
self.events = []
try:
f = open(filepath, "r")
except:
gl.log("can't find file @ %s" % filepath)
return
lastTime = float(0.0)
latestTime = float(-1.0e20)
earliestTime = float(1.0e20)
gl.log(
"MagicDrawAnimator2: before simulation, loading events from " +
str(filepath))
print(
"MagicDrawAnimator2: before simulation, loading events from " +
str(filepath))
for line in f.readlines():
gl.log("read line = " + line)
x = re.search(
"(\d*)[^0-9: \t\n\r\f\v]*\s*:\s*\S*\s*(\S*) -> (\S*)\s*(\S*) ==>",
line)
y = re.search("(\S*) -> (\S*)\s*(\S*) ==>", line)
if x:
eventTime = float(x.groups()[0])
lastTime = eventTime
action = x.groups()[2]
cid = x.groups()[3]
ctype = x.groups()[1]
#gl.log("%s %s (%s)" % (action.upper(), cid, ctype))
elif y:
eventTime = lastTime
action = y.groups()[1]
cid = y.groups()[2]
ctype = y.groups()[0]
#gl.log("%s %s (%s)" % (action.upper(), cid, ctype))
elif line.startswith("---"):
gl.log(line)
continue
else:
continue
#gl.log("%s %s (%s)" % (action.upper(), cid, ctype))
if any([x in cid for x in ["Main"]]):
#gl.log(" ---> Skipping - can't animate Main")
continue
if re.search("(_)?Activity(_.*)?(?!\S)", ctype):
#gl.log(" ---> Skipping - can't animate the Activity object!")
continue
try:
if eventTime < earliestTime:
earliestTime = eventTime
if eventTime > latestTime:
latestTime = eventTime
evt = event(eventTime, action, cid, ctype)
try:
self.events.append(evt)
except:
gl.log("NESTED ARGHHHHH")
except:
gl.log("ARRGHHH")
print("MagicDrawAnimator2: finished loading events from " +
str(filepath))
gl.log("MagicDrawAnimator2: finished loading events from " +
str(filepath))
elementsNotEnded = []
try:
mda = MagicDrawAnimatorUtils2.MagicDrawAnimator2()
#self.playEvents(mda)
if self.timeScale == 0.0:
gl.log("*** ZERO TIMESCALE: setting timeScale to 1.0")
self.timeScale = 1.0
if usingDialogs:
JOptionPane.showMessageDialog(
self.frame, "Click ok to start simulation.")
#simulatedDuration = (float(latestTime) - float(earliestTime))/ float(self.timeScale)
simulatedDuration = (latestTime -
earliestTime) / self.timeScale
lastTime = earliestTime
elapsedTime = earliestTime
simStartTime = earliestTime / self.timeScale #start at time of first event
elapsedSimTime = simStartTime #start at time of first event
zeroTime = time.time()
except:
exceptionType, exceptionValue, exceptionTraceback = sys.exc_info(
)
gl.log("*** EXCEPTION:")
messages = traceback.format_exception(exceptionType,
exceptionValue,
exceptionTraceback)
for message in messages:
gl.log(message)
print("MagicDrawAnimator2: starting simulation with timeScale = " \
+ str(self.timeScale) + "; last event at " + str(latestTime) \
+ " scaling to " + str(simulatedDuration) + " seconds")
gl.log("MagicDrawAnimator2: starting simulation with timeScale = " \
+ str(self.timeScale) + "; last event at " + str(latestTime) \
+ " scaling to " + str(simulatedDuration) + " seconds")
try:
for evt in self.events:
#gl.log("EVENT at " + str(evt.eventTime))
#Sprint("EVENT at " + str(evt.eventTime))
try:
timeOfNextEvent = (float(evt.eventTime) +
0.0) / self.timeScale
except:
exceptionType, exceptionValue, exceptionTraceback = sys.exc_info(
)
gl.log("*** EXCEPTION:")
messages = traceback.format_exception(
exceptionType, exceptionValue, exceptionTraceback)
for message in messages:
gl.log(message)
#print("1")
if evt.eventTime != lastTime:
mda.doThePaint(
) #paint all events occurring at the previous event time
lastTime = float(evt.eventTime)
#print("2")
if timeOfNextEvent > elapsedSimTime:
print("sleeping sim time of next event(" + str(timeOfNextEvent) \
+ ") - elapsed sim time(" + str(elapsedSimTime) + ") = " \
+ str(timeOfNextEvent - elapsedSimTime) + " seconds")
gl.log("sleeping sim time of next event(" + str(timeOfNextEvent) \
+ ") - elapsed sim time(" + str(elapsedSimTime) + ") = " \
+ str(timeOfNextEvent - elapsedSimTime) + " seconds")
if (timeOfNextEvent - elapsedSimTime) > 300:
gl.log("found time jump > 300")
break
time.sleep(timeOfNextEvent - elapsedSimTime)
if "TimeVaryingMap" in evt.componentId:
try:
val = evt.action.split("=")[1]
except:
val = evt.action
gl.log(" ---> (%s) SETTING VALUE of %s: %s" %
(evt.eventTime, evt.componentType, val))
elif evt.componentType.startswith(
"sig") and "ObjectFlow" in evt.componentId:
sid = evt.componentType.strip("sig")
if "null" in evt.action and sid in elementsNotEnded:
gl.log(" ---> (%s) ENDING SIGNAL %s" %
(evt.eventTime, sid))
mda.end(sid)
elementsNotEnded.remove(sid)
elif "null" not in evt.action:
gl.log(" ---> (%s) STARTING SIGNAL %s ==> %s" %
(evt.eventTime, sid, evt.action))
txt = ""
try:
txt = evt.action.split("=")[1]
except:
txt = evt.action
mda.start(sid, txt)
if sid not in elementsNotEnded:
elementsNotEnded.append(sid)
elif "start" in evt.action:
gl.log(" ---> (%s) STARTING" % evt.eventTime)
mda.start(evt.componentId)
if evt.componentId not in elementsNotEnded:
elementsNotEnded.append(evt.componentId)
elif "end" in evt.action:
gl.log(" ---> (%s) ENDING" % evt.eventTime)
mda.end(evt.componentId)
if evt.componentId in elementsNotEnded:
elementsNotEnded.remove(evt.componentId)
t = time.time()
elapsedSimTime = t - zeroTime + simStartTime
elapsedTime = self.timeScale * elapsedSimTime
gl.log("Debug: elapsed time = " + str(elapsedSimTime))
except:
self.handleException()
if len(elementsNotEnded) > 0:
gl.log("Ending Still-Active Events:")
for e in elementsNotEnded:
gl.log(" ending %s " % e)
try:
mda.end(e)
except:
self.handleException()
mda.doThePaint()
else:
gl.log("All Events Completed")
gl.log("DONE")
elif mode == 1:
e = "_17_0_2_edc0357_1352328158277_34448_20209"
mda = MagicDrawAnimatorUtils2.MagicDrawAnimator2()
gl.log("Starting e (%s)" % e)
mda.start(e, "Porpoise Hork")
mda.doThePaint()
i = 3
while i > 0:
i -= 1
gl.log(".")
time.sleep(1)
gl.log("ending e")
mda.end(e)
mda.doThePaint()
elif mode == 2:
try:
mda = MagicDrawAnimatorUtils2.MagicDrawAnimator2()
e = "_17_0_2_edc0357_1352328158277_34448_20209" # in the usePower activity
gl.log("Starting e (%s)" % e)
mda.start(e)
mda.doThePaint()
tb = None
pem = PresentationElementsManager.getInstance()
sm = SessionManager.getInstance()
try:
sym = mda.gimmeTheSymbol(e)
midPoint = sym.getMiddlePoint()
sm.createSession("make box!")
try:
parentPM = sym.getPropertyManager()
c = Color.GREEN
tb = pem.createTextBox(sym, midPoint)
newBounds = Rectangle(15, 15)
newBounds.setLocation(midPoint)
pem.reshapeShapeElement(tb, newBounds)
pem.setText(tb, " gobblelkajdlfkjakj")
pem.setPresentationElementProperties(tb, parentPM)
sm.closeSession()
except:
sm.cancelSession()
self.handleException()
except:
self.handleException()
i = 3
while i > 0:
i -= 1
gl.log(".")
time.sleep(1)
gl.log("ending e")
mda.end(e)
if tb:
sm.createSession("deleteBox!")
try:
pem.deletePresentationElement(tb)
sm.closeSession()
except:
sm.cancelSession()
self.handleException()
mda.doThePaint()
except:
self.handleException()
def diagrambuttonPressed(event) :
IJ.showMessage("Push 'Auto' button each time you want to see the diagram")
x1=10
y1=20
x2=100
y2=50
x3=60
y3=30
xr=10
yr=20
wr=20
hr=20
rect=Rectangle(xr,yr,wr,hr)
#img=IJ.getImage()
#nbslices=self.__img.getImageStackSize()
nbslices=self.__maxLife
IJ.run("Hyperstack...", "title=Diagram type=32-bit display=Color width="+str(x2+(nbslices+1)*x3)+" height="+str(y2+y3*len(dico))+" channels=1 slices="+str(len(self.__measures))+" frames=1")
im=IJ.getImage()
ip=im.getProcessor()
for i in range(len(self.__measures)) :
indiceligne=0
maxvalue=0
minvalue=1000000
im.setPosition(1,i+1,1)
for cellname in self.__listcellname :
indiceligne+=1
for indicecolonne in range(1,nbslices+1):
rect.setLocation(x2+indicecolonne*x3+int(x3/6),(y1+indiceligne*y3-int(y3/2)))
# we create at the first iteration a dictionary with the rectangles (for a future use)
if i==0 :
self.__gridrectangle[(indiceligne,indicecolonne)]=Rectangle(rect)
im.setRoi(rect)
ipr=im.getProcessor()
# we find the min and max values of the datas for a measure given.
if self.__dictMeasures[dico[cellname]][self.__measures[i]][indicecolonne-1]>maxvalue :
maxvalue=self.__dictMeasures[dico[cellname]][self.__measures[i]][indicecolonne-1]
if self.__dictMeasures[dico[cellname]][self.__measures[i]][indicecolonne-1]<minvalue :
minvalue=self.__dictMeasures[dico[cellname]][self.__measures[i]][indicecolonne-1]
# we fill the rectangle with the value of the measure
ipr.setValue(self.__dictMeasures[dico[cellname]][self.__measures[i]][indicecolonne-1])
ipr.fill()
# we write the names and the n of slices on the image with the maxvalue.
ip.setValue(maxvalue)
ip.moveTo(x1,y1)
ip.drawString(self.__measures[i])
for j in range(1,nbslices+1) :
ip.moveTo(x2+j*x3,y1)
ip.drawString("Slice "+str(j))
j=0
for cellname in self.__listcellname :
ip.moveTo(x1,y2+j*y3)
ip.drawString(cellname)
j+=1
im.killRoi()
im=IJ.run(im,"Fire","")
IJ.run("Brightness/Contrast...", "")
#im.setMinAndMax(minvalue,maxvalue)
#im.updateImage()
#we add a mouse listener in order to be able to show the roi corresponding to a rectangle when the user clicks on it.
listener = ML()
listener.name=imgName
for imp in map(WindowManager.getImage, WindowManager.getIDList()):
if imp.getTitle().startswith("Diagram") :
win = imp.getWindow()
if win is None:
continue
win.getCanvas().addMouseListener(listener)
