def execute(self):
j = Jsub(self.__jsubrc)
tasks_data = j.ls(self.__task_ids)
columns = ['id', 'name', 'app', 'backend', 'status', 'created_at']
table_data = _convert_table_data(tasks_data, columns)
_print_table(table_data, columns)
def execute(self):
j = Jsub(self.__jsubrc)
task_profile = load_config_file(self.__task_profile_file)
task = j.create(task_profile)
click.echo('Task created successfully')
click.echo('- ID : %s' % task.data['id'])
click.echo('- Name : %s' % task.data['name'])
click.echo('- Job Number : %s' % len(task.data['jobvar']))
def execute(self):
j = Jsub(self.__jsubrc)
task_profile = load_config_file(self.__task_profile_file)
task = j.create(task_profile)
click.echo('Task created successfully')
click.echo('- ID : %s' % task.data['id'])
click.echo('- Name : %s' % task.data['name'])
click.echo('- Job Number : %s' % len(task.data['jobvar']))
def execute(self):
j = Jsub(self.__jsubrc)
task_data = j.ls([self.__task_id])
task_data = task_data[0]
dst_time = datetime.datetime.strptime(task_data['created_at'],
'%Y-%m-%dT%H:%M:%S.%f')
time_str = datetime.datetime.strftime(dst_time, '%Y-%m-%d %H:%M:%S')
if not self.__silent:
click.echo('Task ID: %s, Name: %s, Backend: %s, Created At: %s' %
(task_data['id'], task_data['name'],
task_data['backend']['type'], time_str))
j.status(self.__task_id, self.__states, self.__silent)
def execute(self):
j = Jsub(self.__jsubrc)
click.echo("Fetching the log files of task %s" % (self.__task_id))
if self.__sub_id:
click.echo("Specifying sub IDs: %s" % (self.__sub_id))
if self.__status:
click.echo("Specifying job status: %s" % (self.__status))
if (not self.__status) and (not self.__sub_id):
click.echo(
"Cannot fetch log files. Please specify sub IDs or job status for the subjobs that you want to fetch log files."
)
else:
j.getlog(self.__task_id,
self.__sub_id,
self.__status,
self.__njobs,
path=self.__path)
def execute(self):
click.echo('Showing the setup of task %d.' % self.__task_id)
click.echo('')
j = Jsub(self.__jsubrc)
task_data = j.show(self.__task_id, self.__dump)
task_data = task_data['scenario']['param']
for key in task_data:
if isinstance(task_data[key], dict):
if 'param' in task_data[key]:
task_data[key].update(task_data[key]['param'])
task_data[key].pop('param', None)
task_report = pprint.pformat(task_data, depth=None, indent=1)
click.echo(task_report)
click.echo('')
if self.__dump:
dump_path = os.path.realpath(self.__dump)
with open(dump_path, 'w') as f:
yaml.dump(task_data, f)
click.echo(
'The above task profile is dumped to %s for modification.' %
os.path.abspath(self.__dump))
def execute(self):
j = Jsub(self.__jsubrc)
if os.path.isfile(
self.__input_list): #get the list of files from a txt
with open(self.__input_list) as f:
files = [x for x in f.read().splitlines() if os.path.isfile(x)]
if os.path.isdir(self.__input_list): #all files in folder
files = [
os.path.join(os.path.realpath(self.__input_list), f)
for f in os.listdir(self.__input_list) if os.path.isfile(
os.path.join(os.path.realpath(self.__input_list), f))
]
for input_file in files:
cmd_reg = [
os.path.join(JSUB_ROOT_DIR, 'scripts', 'dirac-register.sh')
]
cmd_reg.insert(999, input_file)
reg_status = subprocess.call(cmd_reg)
if reg_status != 0:
click.echo("Error when registering file to DFC. (%s)" %
input_file)
def execute(self):
click.echo('Showing')
j = Jsub(self.__jsubrc)
j.show(self.__task_id)
def execute(self):
click.echo('Submitting')
j = Jsub(self.__jsubrc)
j.submit(self.__task_id, dry_run=self.__dry_run)
def execute(self):
click.echo('Package...')
j = Jsub(self.__jsubrc)
for pack in j.package():
click.echo(pack)
def execute(self):
click.echo('Submitting task %d'%self.__task_id)
j = Jsub(self.__jsubrc)
j.submit(self.__task_id, dry_run=self.__dry_run, resubmit=self.__resubmit)
def execute(self):
j = Jsub(self.__jsubrc)
j.reschedule(self.__task_id, self.__status, self.__sub_id,
self.__backend_id)
def execute(self):
click.echo('Rename task %s to new name.' % self.__task_id)
j = Jsub(self.__jsubrc)
j.rename(self.__task_id, self.__new_name)
def execute(self):
click.echo('Removing task %d' % self.__task_id)
j = Jsub(self.__jsubrc)
j.remove(self.__task_id, force=self.__force)
def execute(self):
click.echo('Current active packages:')
j = Jsub(self.__jsubrc)
for pack in j.package():
click.echo(pack)
def execute(self):
click.echo('Rename...')
j = Jsub(self.__jsubrc)
j.rename(self.__task_id, self.__new_name)