Пример #1
0
def _get_kernel():
    # Get Jupyter console kernel info. If there is no console,
    # we'll fail here
    cf = jupyter_client.find_connection_file()
    km = jupyter_client.BlockingKernelClient(connection_file=cf)
    km.load_connection_file()
    return km
Пример #2
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    def start(self, metadata: Dict[str, str], database: int = 1) -> None:
        """Method called in a periodically scheduled async worker that should check the dev env and manage Activity
        Monitor Instances as needed

        Args:
            metadata(dict): A dictionary of data to start the activity monitor
            database(int): The database ID to use

        Returns:
            None
        """
        # Connect to the kernel
        cf = jupyter_client.find_connection_file(
            metadata["kernel_id"], path=os.environ['JUPYTER_RUNTIME_DIR'])
        km = jupyter_client.BlockingKernelClient()

        with open(cf, 'rt') as cf_file:
            cf_data = json.load(cf_file)

        # Get IP address of lab book container on the bridge network
        container_ip = self.get_container_ip()

        if not container_ip:
            raise ValueError("Failed to find LabBook container IP address.")
        cf_data['ip'] = container_ip

        km.load_connection_info(cf_data)

        # Get connection to the DB
        redis_conn = redis.Redis(db=database)

        try:
            while True:
                try:
                    # Check for messages, waiting up to 1 second. This is the rate that records will be merged
                    msg = km.get_iopub_msg(timeout=1)
                    self.handle_message(msg)

                except queue.Empty:
                    # if queue is empty and the record is ready to store, save it!
                    if self.can_store_activity_record is True:
                        self.store_record(metadata)

                # Check if you should exit
                if redis_conn.hget(self.monitor_key,
                                   "run").decode() == "False":
                    logger.info(
                        "Received Activity Monitor Shutdown Message for {}".
                        format(metadata["kernel_id"]))
                    break

        except Exception as err:
            logger.error(
                "Error in JupyterLab Activity Monitor: {}".format(err))
        finally:
            # Delete the kernel monitor key so the dev env monitor will spin up a new process
            # You may lose some activity if this happens, but the next action will sweep up changes
            redis_conn.delete(self.monitor_key)
Пример #3
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    def __init__(self, info=None):
        """Create a new spy.

        Either supply connection information here, or using the
        `connect` method.
        """
        self.client = jupyter_client.BlockingKernelClient()
        if info is not None:
            self.connect(info)
Пример #4
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def create_client(name):
    cf = find_connection_file('emacs-' + name)
    c = client.BlockingKernelClient(connection_file=cf)
    c.load_connection_file()
    c.start_channels()
    chans = [('io', c.get_iopub_msg), ('shell', c.get_shell_msg), ('stdin', c.get_stdin_msg)]
    for name, ch in chans:
        t = threading.Thread(target=msg_router, args=(name, ch))
        t.start()
    return c
Пример #5
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def create_client(name):
    if name.endswith('.json'):
        cf = find_connection_file(name)
    else:
        cf = find_connection_file('emacs-' + name)
    c = client.BlockingKernelClient(connection_file=cf)
    c.load_connection_file()
    c.start_channels()
    io, shell = c.get_iopub_msg, c.get_shell_msg
    t = threading.Thread(target=msg_router, args=(io, shell))
    t.setDaemon(True)
    t.start()
    return c
Пример #6
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def create_client(name):
    if name.endswith('.json'):
        # Received an existing kernel we should connect to.
        cf = find_connection_file(name)
    else:
        cf = find_connection_file('emacs-' + name)
    c = client.BlockingKernelClient(connection_file=cf)
    c.load_connection_file()
    c.start_channels()
    chans = [('io', c.get_iopub_msg), ('shell', c.get_shell_msg), ('stdin', c.get_stdin_msg)]
    for name, ch in chans:
        t = threading.Thread(target=msg_router, args=(name, ch))
        t.start()
    return c
Пример #7
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def kernel(f):
    if verbose:
        logging.info("kernel connecting " + f)
    cf = jupyter_client.find_connection_file(f)
    km = jupyter_client.BlockingKernelClient(connection_file=cf)

    # load connection info and init communication
    km.load_connection_file()
    km.start_channels()

    try:
        km.wait_for_ready(timeout=network_timeout)
    except:
        logging.error("he's dead, jim")
        sys.exit(1)

    return km
Пример #8
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    def initialize_remote(self, connection_file, ssh=None):
        """
        Initialize the client and connect to a kernel (possibly remote),
          if it isn't yet initialized.
        """

        import jupyter_client

        if not self.initialized.get():
            self.client = jupyter_client.BlockingKernelClient()
            if ssh is None:
                self.client.load_connection_file(connection_file)
            else:
                with open(connection_file) as f:
                    parsed = json.load(f)

                newports = jupyter_client.tunnel_to_kernel(
                    connection_file, ssh)
                (
                    parsed["shell_port"],
                    parsed["iopub_port"],
                    parsed["stdin_port"],
                    parsed["hb_port"],
                    parsed["control_port"],
                ) = newports

                with open(connection_file, "w") as f:
                    json.dump(parsed, f)

                self.client.load_connection_file(connection_file)

            self.client.start_channels()
            try:
                print("Connecting to the kernel...")
                self.client.wait_for_ready(timeout=60)
            except RuntimeError as err:
                self.client.stop_channels()
                print("Could not connect to existing kernel: %s" % err,
                      file=sys.stderr)
                return
            self.initialize_common()
Пример #9
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    def start_server(self):
        from glob import glob
        if self.jupyter_process is not None:
            self.stop_server()
        json_dir = jupyter_core.paths.jupyter_runtime_dir()
        jsons_before = glob(os.path.join(json_dir, "*.json"))
        args = shlex.split("jupyter notebook --no-browser")
        self.jupyter_process = p = subprocess.Popen(args=args,
                                                    stderr=subprocess.PIPE)

        # figure out the url from the initial console messages
        from re import search
        line = p.stderr.readline().decode(encoding).strip()
        matches = search("http://.*:(.*?)/", line)
        # print(line)
        while matches is None:
            line = p.stderr.readline().decode(encoding).strip()
            # print(line)
            matches = search("http://.*:(.*?)/", line)
        url = "http://{}:{}/".format("localhost", matches.groups(1)[0])
        # print("URL: " + url)
        self.url = QtCore.QUrl(url)
        print("Notebook at: {}".format(self.url))
        from time import sleep
        sleep(.1)
        jsons_after = glob(os.path.join(json_dir, "*.json"))
        for json in jsons_after:
            if json not in jsons_before:
                self.connection_json = json
                break
        else:
            raise FileNotFoundError(
                "Could not find the connection JSON in {}.".format(json_dir))

        self.notebook_client = jupyter_client.BlockingKernelClient(
            connection_file=self.connection_json)
        self.notebook_client.load_connection_file()

        self.notebook_client.start_channels()
        self.notebook_client.execute("test=123")
Пример #10
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import os
import jupyter_client

# Path of the kernel connection file
cf = 'kernel-23932.json'

# Setup up a blocking kernel client using kernel connection file
km = jupyter_client.BlockingKernelClient(
    connection_file='/run/user/1000/jupyter/' + cf)

# load the connection settings
km.load_connection_file()
direct = '/home/soumitra/Desktop/Projects/GSOC/Scilab-gsoc/Experimentation/Testing/Tester.py'
km.execute_interactive('exec(open(\'' + direct + '\').read())')
print("Training done!")
Пример #11
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import sys
import jupyter_client

cf = sys.argv[1]
modelName = sys.argv[2]

# Setup up a blocking kernel client using kernel connection file
km = jupyter_client.BlockingKernelClient(
    connection_file='/home/soumitra/.local/share/jupyter/runtime/' + cf)

# load the connection settings
km.load_connection_file()

print("Training started!")

# execute any python commands on remote IPython kernel

km.execute('exec(open(\'/home/soumitra/Scripts/' + modelName +
           '.py\').read())')

print("Training done!")
Пример #12
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import jupyter_client
from shutil import copyfile

cf = "kernel-4552.json"
km = jupyter_client.BlockingKernelClient(connection_file=cf)
km.load_connection_file()

km.execute('execfile("cnn_test.py")')