def test_other_channels():
dep1 = Dependencies(conda=["other::conda_pkg2", "conda_pkg1"], pip=[])
channels, packages = dep1._get_channels_packages()
assert channels == ["other", "defaults"]
dep1 = Dependencies(conda=["conda_pkg1", "other::conda_pkg2"], pip=[])
channels, packages = dep1._get_channels_packages()
assert channels == ["defaults", "other"]
def test_handle_pysam():
dep1 = Dependencies(conda=["conda_pkg1", "bioconda::pysam"], pip=[])
channels, packages = dep1._get_channels_packages()
assert channels == ["bioconda", "conda-forge", "defaults"]
dep1 = Dependencies(conda=["conda_pkg1", "bioconda::pybedtools"], pip=[])
channels, packages = dep1._get_channels_packages()
assert channels == ["defaults", "bioconda", "conda-forge"]
def test_bioconda_channels():
dep1 = Dependencies(conda=["conda_pkg1", "bioconda::conda_pkg2"], pip=[])
channels, packages = dep1._get_channels_packages()
assert channels == ["defaults", "bioconda", "conda-forge"]
dep1 = Dependencies(conda=["bioconda::conda_pkg2", "conda_pkg1"], pip=[])
channels, packages = dep1._get_channels_packages()
assert channels == ["bioconda", "conda-forge", "defaults"]
dep1 = Dependencies(conda=["bioconda::conda_pkg2"], pip=[])
channels, packages = dep1._get_channels_packages()
assert channels == ["bioconda", "conda-forge", "defaults"]
dep1 = Dependencies(
conda=["conda-forge::conda_pkg2", "bioconda::conda_pkg2"], pip=[])
channels, packages = dep1._get_channels_packages()
assert channels == ["conda-forge", "bioconda", "defaults"]
dep1 = Dependencies(
conda=["asd::conda_pkg2", "bioconda::conda_pkg2", "dsa::conda_pkg2"],
pip=[])
channels, packages = dep1._get_channels_packages()
assert channels == ["asd", "bioconda", "conda-forge", "dsa", "defaults"]
