def test_plate_layout_handler_get_request(self):
obs = plate_layout_handler_get_request(21)
self.assertEqual(len(obs), 8)
exp = [{
'sample': '1.SKB1.640202.21.A1',
'notes': None
}, {
'sample': '1.SKB2.640194.21.A2',
'notes': None
}, {
'sample': '1.SKB3.640195.21.A3',
'notes': None
}, {
'sample': '1.SKB4.640189.21.A4',
'notes': None
}, {
'sample': '1.SKB5.640181.21.A5',
'notes': None
}, {
'sample': '1.SKB6.640176.21.A6',
'notes': None
}, {
'sample': '1.SKB7.640196.21.A7',
'notes': None
}, {
'sample': '1.SKB8.640193.21.A8',
'notes': None
}, {
'sample': '1.SKB9.640200.21.A9',
'notes': None
}, {
'sample': '1.SKD1.640179.21.A10',
'notes': None
}, {
'sample': '1.SKD2.640178.21.A11',
'notes': None
}, {
'sample': '1.SKD3.640198.21.A12',
'notes': None
}]
self.assertEqual(obs[0], exp)
# The 7th row contains virio controls
exp = [{
'sample': 'vibrio.positive.control.21.G%s' % i,
'notes': None
} for i in range(1, 13)]
self.assertEqual(obs[6], exp)
# The 8th row contains blanks
exp = [{
'sample': 'blank.21.H%s' % i,
'notes': None
} for i in range(1, 12)]
self.assertEqual(obs[7][:-1], exp)
self.assertEqual(obs[7][11], {'sample': 'empty.21.H12', 'notes': None})
regex = 'Plate 100 doesn\'t exist'
with self.assertRaisesRegex(HTTPError, regex):
plate_layout_handler_get_request(100)
def test_plate_layout_handler_get_request(self):
obs = plate_layout_handler_get_request(21)
self.assertEqual(len(obs), 8)
exp = [{
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB2.640194',
'notes': None
}, {
'sample': '1.SKB3.640195',
'notes': None
}, {
'sample': '1.SKB4.640189',
'notes': None
}, {
'sample': '1.SKB5.640181',
'notes': None
}, {
'sample': '1.SKB6.640176',
'notes': None
}, {
'sample': '1.SKB7.640196',
'notes': None
}, {
'sample': '1.SKB8.640193',
'notes': None
}, {
'sample': '1.SKB9.640200',
'notes': None
}, {
'sample': '1.SKD1.640179',
'notes': None
}, {
'sample': '1.SKD2.640178',
'notes': None
}, {
'sample': '1.SKD3.640198',
'notes': None
}]
# The first 6 rows are all equal
for row in obs[:6]:
self.assertEqual(row, exp)
# The 7th row contains virio controls
exp = [{'sample': 'vibrio positive control', 'notes': None}] * 12
self.assertEqual(obs[6], exp)
# The 8th row contains blanks
exp = [{'sample': 'blank', 'notes': None}] * 12
self.assertEqual(obs[7], exp)
regex = 'Plate 100 doesn\'t exist'
with self.assertRaisesRegex(HTTPError, regex):
plate_layout_handler_get_request(100)
def test_plate_layout_handler_get_request(self):
obs = plate_layout_handler_get_request(21)
self.assertEqual(len(obs), 8)
exp = [{
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB1.640202',
'notes': None
}, {
'sample': '1.SKB1.640202',
'notes': None
}]
self.assertEqual(obs[0], exp)
# The 7th row contains vibrio controls
exp = [{
'sample': 'vibrio.positive.control.Test.plate.1.G%s' % i,
'notes': None
} for i in range(1, 13)]
self.assertEqual(obs[6], exp)
# The 8th row contains blanks
exp = [{
'sample': 'blank.Test.plate.1.H%s' % i,
'notes': None
} for i in range(1, 12)]
self.assertEqual(obs[7][:-1], exp)
self.assertEqual(obs[7][11], {
'sample': 'empty.Test.plate.1.H12',
'notes': None
})
regex = 'Plate 100 doesn\'t exist'
with self.assertRaisesRegex(HTTPError, regex):
plate_layout_handler_get_request(100)