def addInput(self, dataunit, data):
"""
Adds an input for the color merging filter
"""
settings = dataunit.getSettings()
if not settings.get("PreviewChannel"):
Logging.info("Not including ", dataunit, "in merging", kw="processing")
return
Module.addInput(self, dataunit, data)
self.n += 1
ctf = settings.get("ColorTransferFunction")
# Logging.info("ctf=",ctf,kw="processing")
self.ctfs.append(ctf)
self.alphaTF = settings.get("AlphaTransferFunction")
self.alphaMode = settings.get("AlphaMode")
# print "n=",self.n,"self.settings=",self.settings
# itf=self.settings.getCounted("IntensityTransferFunction",self.n)
itf = settings.get("IntensityTransferFunction")
if not itf:
Logging.info("Didn't get iTF", kw="processing")
self.intensityTransferFunctions.append(itf)
def addInput(self, dataunit, data):
"""
Adds an input for the color merging filter
"""
settings = dataunit.getSettings()
if not settings.get("PreviewChannel"):
Logging.info("Not including ",
dataunit,
"in merging",
kw="processing")
return
Module.addInput(self, dataunit, data)
self.n += 1
ctf = settings.get("ColorTransferFunction")
# Logging.info("ctf=",ctf,kw="processing")
self.ctfs.append(ctf)
self.alphaTF = settings.get("AlphaTransferFunction")
self.alphaMode = settings.get("AlphaMode")
#print "n=",self.n,"self.settings=",self.settings
#itf=self.settings.getCounted("IntensityTransferFunction",self.n)
itf = settings.get("IntensityTransferFunction")
if not itf:
Logging.info("Didn't get iTF", kw="processing")
self.intensityTransferFunctions.append(itf)
def addInput(self, dataunit, data):
"""
Adds an input for the colocalization filter
"""
Module.addInput(self, dataunit, data)
settings = dataunit.getSettings()
self.settingsLst.append(settings)
th0 = settings.get("ColocalizationLowerThreshold")
th1 = settings.get("ColocalizationUpperThreshold")
self.thresholds.append((th0, th1))
self.depth = self.settings.get("ColocalizationDepth")
def addInput(self, dataunit, data):
"""
Adds an input for the single dataunit processing filter
"""
Module.addInput(self, dataunit, data)
settings = dataunit.getSettings()
tf = settings.getCounted("IntensityTransferFunctions", self.timepoint)
if not tf:
raise ("No Intensity Transfer Function given for Single DataUnit "
"to be processed")
self.intensityTransferFunctions.append(tf)
def addInput(self, dataunit, data):
"""
Adds an input for the colocalization filter
"""
Module.addInput(self, dataunit, data)
settings = dataunit.getSettings()
self.settingsLst.append(settings)
th0 = settings.get("ColocalizationLowerThreshold")
th1 = settings.get("ColocalizationUpperThreshold")
self.thresholds.append((th0, th1))
self.depth = self.settings.get("ColocalizationDepth")
def addInput(self, dataunit, data):
"""
Adds an input for the single dataunit processing filter
"""
Module.addInput(self, dataunit, data)
settings = dataunit.getSettings()
tf = settings.getCounted("IntensityTransferFunctions", self.timepoint)
if not tf:
raise ("No Intensity Transfer Function given for Single DataUnit "
"to be processed")
self.intensityTransferFunctions.append(tf)
