def __init__(self, parent, dev) : HardwareGUIControl.__init__(self, parent, dev) sizer = wx.BoxSizer(wx.VERTICAL) ################################################ # Specify the communication port name sizer.Add (wx.StaticText(self, label="Communication port"), flag=wx.LEFT, border=5) port_name = wx.SpinCtrl (self, value="18") port_name.__label__ = "port" sizer.Add (port_name, flag=wx.EXPAND, border=5) ################## Select filter ################### sizer.Add( wx.StaticText(self, label="\nSelect filter"), flag=wx.LEFT, border=5) self.filter_num_ctrl = wx.SpinCtrl (self, min=1, max=6, value="1") self.filter_num_ctrl.__label__ = "selected_filter" def GoToFilter (event) : if self.dev.Initialize( self.GetSettings() ) == RETURN_FAIL : return self.dev.SetFilter( self.filter_num_ctrl.GetValue() ) self.filter_num_ctrl.Bind(wx.EVT_SPINCTRL, GoToFilter) sizer.Add (self.filter_num_ctrl, flag=wx.EXPAND, border=5) ################################################ self.SetSizer(sizer) ############### GUI is created, now generate settings ###################### self.CreateSettingsDict()
def __init__(self, parent, **kwards) : HardwareGUIControl.__init__(self, parent, manager_cls=ManagerNewportMovingStage, **kwards) sizer = wx.BoxSizer(wx.VERTICAL) # Specify the communication port name sizer.Add (wx.StaticText(self, label="\nCommunication port"), flag=wx.LEFT, border=5) port_name = wx.TextCtrl (self, value="COM15") port_name.__label__ = "port" sizer.Add (port_name, flag=wx.EXPAND, border=5) # Spacer sizer.Add (wx.StaticText(self, label=""), flag=wx.LEFT, border=5) # Button to start joystick bind_joystick_button = MultiStateButton(self, states=[ (self.StartJoystick, "Start joystick"), (self.StopJoystick, "STOP joystick") ] ) sizer.Add (bind_joystick_button, flag=wx.EXPAND, border=5) self.SetSizer(sizer) ############### GUI is created, now generate settings ###################### self.CreateSettingsDict()
def __init__(self, parent, dev):
HardwareGUIControl.__init__(self, parent, dev)
sizer = wx.BoxSizer(wx.VERTICAL)
################################################
# Specify the communication port name
sizer.Add(wx.StaticText(self, label="Communication port"),
flag=wx.LEFT,
border=5)
port_name = wx.SpinCtrl(self, value="18")
port_name.__label__ = "port"
sizer.Add(port_name, flag=wx.EXPAND, border=5)
################## Select filter ###################
sizer.Add(wx.StaticText(self, label="\nSelect filter"),
flag=wx.LEFT,
border=5)
self.filter_num_ctrl = wx.SpinCtrl(self, min=1, max=6, value="1")
self.filter_num_ctrl.__label__ = "selected_filter"
def GoToFilter(event):
if self.dev.Initialize(self.GetSettings()) == RETURN_FAIL: return
self.dev.SetFilter(self.filter_num_ctrl.GetValue())
self.filter_num_ctrl.Bind(wx.EVT_SPINCTRL, GoToFilter)
sizer.Add(self.filter_num_ctrl, flag=wx.EXPAND, border=5)
################################################
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent, **kwards):
HardwareGUIControl.__init__(self,
parent,
manager_cls=ManagerNewportMovingStage,
**kwards)
sizer = wx.BoxSizer(wx.VERTICAL)
# Specify the communication port name
sizer.Add(wx.StaticText(self, label="\nCommunication port"),
flag=wx.LEFT,
border=5)
port_name = wx.TextCtrl(self, value="COM15")
port_name.__label__ = "port"
sizer.Add(port_name, flag=wx.EXPAND, border=5)
# Spacer
sizer.Add(wx.StaticText(self, label=""), flag=wx.LEFT, border=5)
# Button to start joystick
bind_joystick_button = MultiStateButton(self,
states=[(self.StartJoystick,
"Start joystick"),
(self.StopJoystick,
"STOP joystick")])
sizer.Add(bind_joystick_button, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent) :
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
# Starting pixel to calibrate
sizer.Add (wx.StaticText(self, label="Initial pixel"), flag=wx.LEFT, border=5)
initial_pixel_ctr = wx.SpinCtrl (self, value="0", min=0, max=640)
initial_pixel_ctr.SetLabel("initial pixel")
sizer.Add (initial_pixel_ctr, flag=wx.EXPAND, border=5)
# Final pixel to calibrate
sizer.Add (wx.StaticText(self, label="Final pixel"), flag=wx.LEFT, border=5)
final_pixel_ctr = wx.SpinCtrl (self, value="640", min=0, max=640)
final_pixel_ctr.SetLabel("final pixel")
sizer.Add (final_pixel_ctr, flag=wx.EXPAND, border=5)
# Size of pixel bundle
sizer.Add (wx.StaticText(self, label="\nPixels to bundle"), flag=wx.EXPAND, border=5)
self.pixel_bundle_width = wx.SpinCtrl(self, value="1", min=1, max=640)
self.pixel_bundle_width.SetLabel ("pixel bundle width")
sizer.Add (self.pixel_bundle_width, flag=wx.EXPAND, border=5)
# Correspondence between wavelength and pulse shaper pixel number
# entered as dictionary without the "{}"
sizer.Add (wx.StaticText(self,
label="\nPixel to wavelength entered as \n<pixel1> : <lambda1>,\n<pixel2> : <lambda2>, etc.")
, flag=wx.EXPAND, border=5)
pixel2lambda_ctrl = wx.TextCtrl (self, value="", style=wx.TE_MULTILINE|wx.EXPAND)
pixel2lambda_ctrl.__label__ = "pixel_to_lamba"
sizer.Add (pixel2lambda_ctrl, flag=wx.EXPAND, border=5)
# Initial voltage
sizer.Add (wx.StaticText(self, label="\nInitial voltage"), flag=wx.LEFT, border=5)
initial_voltage_ctr = wx.SpinCtrl (self, value="500", min=0, max=PULSESHAPER_MAX_VAL)
initial_voltage_ctr.SetLabel("initial voltage")
sizer.Add (initial_voltage_ctr, flag=wx.EXPAND, border=5)
# Final voltage
sizer.Add (wx.StaticText(self, label="Final voltage"), flag=wx.LEFT, border=5)
final_voltage_ctr = wx.SpinCtrl (self, value="800", min=0, max=PULSESHAPER_MAX_VAL)
final_voltage_ctr.SetLabel("final voltage")
sizer.Add (final_voltage_ctr, flag=wx.EXPAND, border=5)
# Voltage step size
sizer.Add (wx.StaticText(self, label="Voltage scanning step"), flag=wx.LEFT, border=5)
voltage_step_ctr = wx.SpinCtrl (self, value="10", min=0, max=PULSESHAPER_MAX_VAL)
voltage_step_ctr.SetLabel("voltage step")
sizer.Add (voltage_step_ctr, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent):
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
################################################
sizer.Add(wx.StaticText(self, label="Exposure time (ms)"),
flag=wx.LEFT,
border=5)
exposure_time_ctr = wx.SpinCtrl(self, value="20", min=1, max=1e6)
exposure_time_ctr.SetLabel("Exposure time")
sizer.Add(exposure_time_ctr, flag=wx.EXPAND, border=5)
################ Temperature ################
sizer.Add(wx.StaticText(self, label="\nTemperature"),
flag=wx.LEFT,
border=5)
temperature_ctr = wx.SpinCtrl(self, value="-10", min=-50, max=50)
temperature_ctr.SetLabel("Temperature")
sizer.Add(temperature_ctr, flag=wx.EXPAND, border=10)
################ Shamrock settings ################
################ Grating ################
sizer.Add(wx.StaticText(self, label="\nGrating #"),
flag=wx.LEFT,
border=5)
grating_ctr = wx.SpinCtrl(self, value="1", min=1, max=3)
grating_ctr.SetLabel("grating")
sizer.Add(grating_ctr, flag=wx.EXPAND, border=5)
################ Wavelength ################
sizer.Add(wx.StaticText(self, label="\nWavelength (nm)"),
flag=wx.LEFT,
border=5)
wavelength_ctr = wx.SpinCtrl(self, value="610", min=10, max=1000)
wavelength_ctr.SetLabel("wavelength")
sizer.Add(wavelength_ctr, flag=wx.EXPAND, border=5)
################ Slit width ################
sizer.Add(wx.StaticText(self, label="\nSlit width (um)"),
flag=wx.LEFT,
border=5)
slit_width_ctr = wx.SpinCtrl(self, value="500", min=0, max=2000)
slit_width_ctr.SetLabel("slit width")
sizer.Add(slit_width_ctr, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent, dev) : HardwareGUIControl.__init__(self, parent, dev) sizer = wx.BoxSizer(wx.VERTICAL) # Specify the communication port name sizer.Add (wx.StaticText(self, label="Communication port"), flag=wx.LEFT, border=5) port_name = wx.TextCtrl (self, value="COM15") port_name.__label__ = "port" sizer.Add (port_name, flag=wx.EXPAND, border=5) # How long to wait after new pulse shape was sent sizer.Add (wx.StaticText(self, label="\nWait to update (ms)"), flag=wx.LEFT, border=5) update_time_delay_ctr = wx.SpinCtrl (self, value="50", min=0, max=10000) update_time_delay_ctr.__label__ = "update_time_delay" sizer.Add (update_time_delay_ctr, flag=wx.EXPAND, border=5) # Calibration file sizer.Add (wx.StaticText(self, label="\nCalibration file"), flag=wx.LEFT, border=5) calibration_file_ctr = wx.FilePickerCtrl(self, message="Chose pulse shaper calibration file...") calibration_file_ctr.__label__ = "calibration_file_name" sizer.Add (calibration_file_ctr, flag=wx.EXPAND, border=5) # Select how to utilize calibration information sizer.Add (wx.StaticText(self, label="\nAmplitude/phase to voltage conversion"), flag=wx.LEFT, border=5) choices = AmplPhase2ShaperMasks.Choices() amplphase_convertion_ctrl = wx.ComboBox(self, choices=choices, value=choices[0], style=wx.CB_READONLY ) amplphase_convertion_ctrl.__label__ = "amplphase2shapermasks" sizer.Add (amplphase_convertion_ctrl, flag=wx.EXPAND, border=5) # Transform limited phase sizer.Add (wx.StaticText(self, label="\nTrasform limited phase (multi-line text)"), flag=wx.LEFT, border=5) self.transform_lim_phase_ctrl = wx.TextCtrl (self, style=wx.TE_MULTILINE) self.transform_lim_phase_ctrl.__label__ = "transform_limited_phase" sizer.Add (self.transform_lim_phase_ctrl, flag=wx.EXPAND, border=5) # Button to load transform limited phase load_tl_ctrl = wx.Button (self, label="Load transform limited phase") load_tl_ctrl.Bind (wx.EVT_BUTTON, self.LoadTransformLimited) sizer.Add (load_tl_ctrl, flag=wx.EXPAND, border=5) # Amplitude correction sizer.Add (wx.StaticText(self, label="\nAmplitude correction (multi-line text)"), flag=wx.LEFT, border=5) self.ampl_correction_ctrl = wx.TextCtrl (self, style=wx.TE_MULTILINE) self.ampl_correction_ctrl.__label__ = "ampl_correction" sizer.Add (self.ampl_correction_ctrl, flag=wx.EXPAND, border=5) self.SetSizer(sizer) ############### GUI is created, now generate settings ###################### self.CreateSettingsDict()
def __init__(self, parent, **kwards):
HardwareGUIControl.__init__(self,
parent,
manager_cls=ManagerThorlabsCamera,
**kwards)
sizer = wx.BoxSizer(wx.VERTICAL)
# Spacer
sizer.Add(wx.StaticText(self, label=""), flag=wx.LEFT, border=5)
# Check-box to draw gun-sight
draw_gun_sight_ctl = wx.CheckBox(self, label="Draw gun-sight")
draw_gun_sight_ctl.__label__ = "draw_gun_sight"
sizer.Add(draw_gun_sight_ctl, flag=wx.EXPAND, border=5)
# Enable interactive update
draw_gun_sight_ctl.Bind(wx.EVT_CHECKBOX, self.UpdateSettings)
# Radius of gun-sight
sizer.Add(wx.StaticText(self, label="\nGun-sight radius"),
flag=wx.LEFT,
border=5)
gun_sight_radius_ctrl = wx.SpinCtrl(self,
value="43",
min=0,
max=min(CAMERA_IMG_WIDTH,
CAMERA_IMG_HIGHT))
gun_sight_radius_ctrl.__label__ = "radius"
sizer.Add(gun_sight_radius_ctrl, flag=wx.EXPAND, border=5)
# Enable interactive update
gun_sight_radius_ctrl.Bind(wx.EVT_SPINCTRL, self.UpdateSettings)
# Spacer
sizer.Add(wx.StaticText(self, label=""), flag=wx.LEFT, border=5)
# Button for displaying image
show_img_button = MultiStateButton(self,
states=[(self.StartShowingImg,
"Show image"),
(self.StopShowingImg,
"STOP")])
sizer.Add(show_img_button, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent) :
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
################################################
sizer.Add (wx.StaticText(self, label="Exposure time (ms)"), flag=wx.LEFT, border=5)
exposure_time_ctr = wx.SpinCtrl (self, value="20", min=1, max=1e6)
exposure_time_ctr.SetLabel("Exposure time")
sizer.Add (exposure_time_ctr, flag=wx.EXPAND, border=5)
################ Temperature ################
sizer.Add (wx.StaticText(self, label="\nTemperature"), flag=wx.LEFT, border=5)
temperature_ctr = wx.SpinCtrl (self, value="-10", min=-50, max=50)
temperature_ctr.SetLabel ("Temperature")
sizer.Add (temperature_ctr, flag=wx.EXPAND, border=10)
################ Shamrock settings ################
################ Grating ################
sizer.Add (wx.StaticText(self, label="\nGrating #"), flag=wx.LEFT, border=5)
grating_ctr = wx.SpinCtrl (self, value="1", min=1, max=3)
grating_ctr.SetLabel("grating")
sizer.Add (grating_ctr, flag=wx.EXPAND, border=5)
################ Wavelength ################
sizer.Add (wx.StaticText(self, label="\nWavelength (nm)"), flag=wx.LEFT, border=5)
wavelength_ctr = wx.SpinCtrl (self, value="610", min=10, max=1000)
wavelength_ctr.SetLabel("wavelength")
sizer.Add (wavelength_ctr, flag=wx.EXPAND, border=5)
################ Slit width ################
sizer.Add (wx.StaticText(self, label="\nSlit width (um)"), flag=wx.LEFT, border=5)
slit_width_ctr = wx.SpinCtrl (self, value="500", min=0, max=2000)
slit_width_ctr.SetLabel("slit width")
sizer.Add (slit_width_ctr, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent=None, dev=None):
HardwareGUIControl.__init__(self, parent, dev)
sizer = wx.BoxSizer(wx.VERTICAL)
sizer.Add(wx.StaticText(self, label="Description"),
flag=wx.LEFT,
border=5)
# Text entry field
dw, dh = wx.DisplaySize()
info_txt = wx.TextCtrl(self,
style=wx.TE_MULTILINE | wx.TE_RICH2
| wx.TE_AUTO_URL,
size=(-1, 0.4 * dh))
info_txt.__label__ = "info_txt"
sizer.Add(info_txt, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__ (self, parent) : HardwareGUIControl.__init__(self, parent) self.sizer = wx.BoxSizer(wx.VERTICAL) sizer.Add (wx.StaticText(self, label="Gaussian mutation:\nMean"), flag=wx.LEFT, border=5) mu_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.0, digits=3) mu_ctrl.__label__ = "gaussian_mutation_mu" sizer.Add (mu_ctrl , flag=wx.EXPAND, border=5) sizer.Add (wx.StaticText(self, label="Sigma"), flag=wx.LEFT, border=5) sigma_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.05, digits=3) sigma_ctrl.__label__ = "gaussian_mutation_sigma" sizer.Add (sigma_ctrl , flag=wx.EXPAND, border=5) sizer.Add (wx.StaticText(self, label="Independent probability for attribute mutation"), flag=wx.LEFT, border=5) indpb_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=1., digits=3) indpb_ctrl.__label__ = "mutation_indpb" sizer.Add (indpb_ctrl, flag=wx.EXPAND, border=5) # Separator sizer.Add (wx.StaticText(self), border=5) # cxpb - The probability of mating two individuals sizer.Add (wx.StaticText(self, label="Mating probability"), flag=wx.LEFT, border=5) cxpb_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.5, digits=3) cxpb_ctrl.__label__ = "cxpb" sizer.Add (cxpb_ctrl, flag=wx.EXPAND, border=5) # mutpb - The probability of mutating an individuals sizer.Add (wx.StaticText(self, label="Mutating probability"), flag=wx.LEFT, border=5) mutpb_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.1, digits=3) mutpb_ctrl.__label__ = "mutpb" sizer.Add (mutpb_ctrl, flag=wx.EXPAND, border=5) self.SetSizer(self.sizer) ############### GUI is created, now generate settings ###################### self.CreateSettingsDict()
def __init__(self, parent, **kwards) : HardwareGUIControl.__init__(self, parent, manager_cls=ManagerThorlabsCamera, **kwards) sizer = wx.BoxSizer(wx.VERTICAL) # Spacer sizer.Add (wx.StaticText(self, label=""), flag=wx.LEFT, border=5) # Check-box to draw gun-sight draw_gun_sight_ctl = wx.CheckBox(self, label="Draw gun-sight") draw_gun_sight_ctl.__label__ = "draw_gun_sight" sizer.Add (draw_gun_sight_ctl, flag=wx.EXPAND, border=5) # Enable interactive update draw_gun_sight_ctl.Bind(wx.EVT_CHECKBOX, self.UpdateSettings) # Radius of gun-sight sizer.Add (wx.StaticText(self, label="\nGun-sight radius"), flag=wx.LEFT, border=5) gun_sight_radius_ctrl = wx.SpinCtrl (self, value="43", min=0, max=min(CAMERA_IMG_WIDTH, CAMERA_IMG_HIGHT) ) gun_sight_radius_ctrl.__label__ = "radius" sizer.Add (gun_sight_radius_ctrl, flag=wx.EXPAND, border=5) # Enable interactive update gun_sight_radius_ctrl.Bind (wx.EVT_SPINCTRL, self.UpdateSettings) # Spacer sizer.Add (wx.StaticText(self, label=""), flag=wx.LEFT, border=5) # Button for displaying image show_img_button = MultiStateButton(self, states=[ (self.StartShowingImg, "Show image"), (self.StopShowingImg, "STOP") ] ) sizer.Add (show_img_button, flag=wx.EXPAND, border=5) self.SetSizer(sizer) ############### GUI is created, now generate settings ###################### self.CreateSettingsDict()
def __init__(self, parent):
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
# List of positions of channels
sizer.Add(wx.StaticText(
self, label="Channel number with pure samples for learning"),
flag=wx.LEFT,
border=5)
self.chanel_odd_experiment_ctrl = wx.TextCtrl(self,
value="",
style=wx.TE_MULTILINE
| wx.EXPAND)
self.chanel_odd_experiment_ctrl.__label__ = "channels"
sizer.Add(self.chanel_odd_experiment_ctrl, flag=wx.EXPAND, border=5)
# Filters (on filter wheel) to be used
sizer.Add(wx.StaticText(self, label="Filter numbers"),
flag=wx.LEFT,
border=5)
self.filters_ctrl = wx.TextCtrl(self,
value="",
style=wx.TE_MULTILINE | wx.EXPAND)
self.filters_ctrl.__label__ = "filters"
sizer.Add(self.filters_ctrl, flag=wx.EXPAND, border=5)
sizer.Add(wx.StaticText(self, label="\nMax amplitude (ND filter)"),
flag=wx.LEFT,
border=5)
max_ampl_ctrl = wxFloatSpin(self,
min_val=0,
max_val=1,
increment=0.01,
value=1.,
digits=3)
max_ampl_ctrl.__label__ = "max_ampl"
sizer.Add(max_ampl_ctrl, flag=wx.EXPAND, border=5)
################ Parameters of reference mask ####################
sb_sizer = wx.StaticBoxSizer(
wx.StaticBox(self, label="Reference mask parameters: "),
wx.VERTICAL)
# Min value of coefficient
sb_sizer.Add(wx.StaticText(self, label="min coefficient"),
flag=wx.LEFT,
border=5)
coeff_min_ctrl = wxFloatSpin(self,
min_val=-10,
max_val=10,
increment=0.01,
value=-0.9,
digits=3)
coeff_min_ctrl.__label__ = "coeff_min"
sb_sizer.Add(coeff_min_ctrl, flag=wx.EXPAND, border=5)
# Max value of coefficient
sb_sizer.Add(wx.StaticText(self, label="max coefficient"),
flag=wx.LEFT,
border=5)
coeff_max_ctrl = wxFloatSpin(self,
min_val=0,
max_val=10,
increment=0.01,
value=0.9,
digits=3)
coeff_max_ctrl.__label__ = "coeff_max"
sb_sizer.Add(coeff_max_ctrl, flag=wx.EXPAND, border=5)
# Number of coeff scans
sb_sizer.Add(wx.StaticText(self, label="number of scans"),
flag=wx.LEFT,
border=5)
coeff_num_ctrl = wx.SpinCtrl(self, value="20", min=2, max=100000)
coeff_num_ctrl.__label__ = "coeff_num"
sb_sizer.Add(coeff_num_ctrl, flag=wx.EXPAND, border=5)
# Polynomial basis type
sb_sizer.Add(wx.StaticText(self, label="\nPolynomial basis type"),
flag=wx.LEFT,
border=5)
self.polynomial_bases = {
"Chebyshev": np.polynomial.chebyshev.Chebyshev,
"Legendre": np.polynomial.legendre.Legendre,
"Laguerre": np.polynomial.laguerre.Laguerre,
"Hermite": np.polynomial.hermite.Hermite,
"Monomials": np.polynomial.polynomial.Polynomial
}
choices = self.polynomial_bases.keys()
polynomial_bais_ctrl = wx.ComboBox(self,
choices=choices,
value=choices[0],
style=wx.CB_READONLY)
polynomial_bais_ctrl.__label__ = "polynomial_basis"
sb_sizer.Add(polynomial_bais_ctrl, flag=wx.EXPAND, border=5)
# Initial polynomial order
sb_sizer.Add(wx.StaticText(self, label="\nInitial polynomial order"),
flag=wx.LEFT,
border=5)
min_poly_order_ctrl = wx.SpinCtrl(self, value="2", min=0, max=100000)
min_poly_order_ctrl.__label__ = "min_polynomial_order"
sb_sizer.Add(min_poly_order_ctrl, flag=wx.EXPAND, border=5)
# Final polynomial order
sb_sizer.Add(wx.StaticText(self, label="\nFinal polynomial order"),
flag=wx.LEFT,
border=5)
max_poly_order_ctrl = wx.SpinCtrl(self, value="4", min=0, max=100000)
max_poly_order_ctrl.__label__ = "max_polynomial_order"
sb_sizer.Add(max_poly_order_ctrl, flag=wx.EXPAND, border=5)
sizer.Add(sb_sizer, flag=wx.EXPAND, border=10)
################################################
# Scan button
self.get_coeff_scan_btn = wx.Button(self)
self.get_coeff_scan_btn._start_label = "Scan polynomial coefficient"
self.get_coeff_scan_btn._start_method = self.DoScannning
self.get_coeff_scan_btn._stop_label = "STOP scanning"
self.get_coeff_scan_btn._stop_method = self.StopScannning
self.get_coeff_scan_btn.SetLabel(self.get_coeff_scan_btn._start_label)
self.get_coeff_scan_btn.Bind(wx.EVT_BUTTON,
self.get_coeff_scan_btn._start_method)
sizer.Add(self.get_coeff_scan_btn, flag=wx.EXPAND, border=5)
# Separator
sizer.Add(wx.StaticText(self), border=5)
# Record background signal
background_signal_button = wx.Button(self, label="Record background")
background_signal_button.Bind(wx.EVT_BUTTON, self.RecordBackground)
sizer.Add(background_signal_button, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent, dev):
HardwareGUIControl.__init__(self, parent, dev)
xpixels, ypixels = 1024, 1024
sizer = wx.BoxSizer(wx.VERTICAL)
################ Readout mode settings ################
boxsizer_ = wx.StaticBoxSizer(wx.StaticBox(self, label="Readout mode"),
wx.HORIZONTAL)
boxsizer_.Add(wx.RadioButton(self,
label="Full vertical binning",
style=wx.RB_GROUP),
flag=wx.EXPAND,
border=5)
boxsizer_.Add(wx.RadioButton(self, label="Image"),
flag=wx.EXPAND,
border=5)
sizer.Add(boxsizer_, flag=wx.EXPAND, border=10)
################ Image dimensions ################
boxsizer_ = wx.StaticBoxSizer(
wx.StaticBox(self, label="Image resolution (image mode only)"),
wx.VERTICAL)
boxsizer_.Add(wx.StaticText(self, label="X min"),
flag=wx.LEFT,
border=5)
x_min_ctrl = wx.SpinCtrl(self, value="1", min=1, max=xpixels)
x_min_ctrl.SetLabel("x_min")
boxsizer_.Add(x_min_ctrl, flag=wx.EXPAND, border=5)
boxsizer_.Add(wx.StaticText(self, label="X max"),
flag=wx.LEFT,
border=5)
x_max_ctrl = wx.SpinCtrl(self, value=str(xpixels), min=1, max=xpixels)
x_max_ctrl.SetLabel("x_max")
boxsizer_.Add(x_max_ctrl, flag=wx.EXPAND, border=5)
boxsizer_.Add(wx.StaticText(self, label="Y min"),
flag=wx.LEFT,
border=5)
y_min_ctrl = wx.SpinCtrl(self, value="1", min=1, max=ypixels)
y_min_ctrl.SetLabel("y_min")
boxsizer_.Add(y_min_ctrl, flag=wx.EXPAND, border=5)
boxsizer_.Add(wx.StaticText(self, label="Y max"),
flag=wx.LEFT,
border=5)
y_max_ctrl = wx.SpinCtrl(self, value=str(ypixels), min=1, max=ypixels)
y_max_ctrl.SetLabel("y_max")
boxsizer_.Add(y_max_ctrl, flag=wx.EXPAND, border=5)
# Image binning
boxsizer_.Add(wx.StaticText(self, label="X binning"),
flag=wx.LEFT,
border=5)
x_bin_ctrl = wx.SpinCtrl(self, value="1", min=1, max=xpixels)
x_bin_ctrl.SetLabel("x_bin")
boxsizer_.Add(x_bin_ctrl, flag=wx.EXPAND, border=5)
boxsizer_.Add(wx.StaticText(self, label="Y binning"),
flag=wx.LEFT,
border=5)
y_bin_ctrl = wx.SpinCtrl(self, value="1", min=1, max=ypixels)
y_bin_ctrl.SetLabel("y_bin")
boxsizer_.Add(y_bin_ctrl, flag=wx.EXPAND, border=5)
sizer.Add(boxsizer_, flag=wx.EXPAND, border=10)
################################################
sizer.Add(wx.StaticText(self, label="\nExposure time (ms)"),
flag=wx.LEFT,
border=5)
exposure_time_ctr = wx.SpinCtrl(self, value="20", min=1, max=1e6)
exposure_time_ctr.SetLabel("Exposure time")
sizer.Add(exposure_time_ctr, flag=wx.EXPAND, border=5)
sizer.Add(wx.StaticText(self, label="Scans to accumulate"),
flag=wx.LEFT,
border=5)
scans_to_average_ctr = wx.SpinCtrl(self, value="1", min=1, max=1e6)
scans_to_average_ctr.__label__ = "scans_to_accumulate"
sizer.Add(scans_to_average_ctr, flag=wx.EXPAND, border=5)
################### Gain ################################
sizer.Add(wx.StaticText(self, label="\nGain"), flag=wx.LEFT, border=5)
gain_ctr = wx.SpinCtrl(self, value="1", min=1, max=1e6)
gain_ctr.SetLabel("Gain")
sizer.Add(gain_ctr, flag=wx.EXPAND, border=5)
################ Trigger modes ################
boxsizer_ = wx.StaticBoxSizer(wx.StaticBox(self, label="Trigger mode"),
wx.HORIZONTAL)
boxsizer_.Add(wx.RadioButton(self, label="Internal",
style=wx.RB_GROUP),
flag=wx.EXPAND,
border=5)
boxsizer_.Add(wx.RadioButton(self, label="External"),
flag=wx.EXPAND,
border=5)
sizer.Add(boxsizer_, flag=wx.EXPAND, border=10)
################ Parameters of DDG used only when the external trigger is on ################
sizer.Add(wx.StaticText(self, label="\nDDG gate time delay (ns)"),
flag=wx.LEFT,
border=5)
DDG_delay_time_ctr = wx.SpinCtrl(self, value="0", min=0, max=1e9)
DDG_delay_time_ctr.SetLabel("DDG delay time")
sizer.Add(DDG_delay_time_ctr, flag=wx.EXPAND, border=10)
sizer.Add(wx.StaticText(self, label="DDG gate width time (ns)"),
flag=wx.LEFT,
border=5)
DDG_width_ctr = wx.SpinCtrl(self, value="4", min=0, max=1e9)
DDG_width_ctr.SetLabel("DDG width")
sizer.Add(DDG_width_ctr, flag=wx.EXPAND, border=10)
################ Number of pulses for the integrate on chip option ################
sizer.Add(wx.StaticText(
self, label="\nNumber of pulses to integrate on chip"),
flag=wx.LEFT,
border=5)
IOC_num_ctr = wx.SpinCtrl(self, value="1", min=0, max=1e6)
IOC_num_ctr.SetLabel("IOCNumber")
sizer.Add(IOC_num_ctr, flag=wx.EXPAND, border=10)
################ Temperature ################
sizer.Add(wx.StaticText(self, label="\nTemperature"),
flag=wx.LEFT,
border=5)
temperature_ctr = wx.SpinCtrl(self, value="0", min=-50, max=50)
temperature_ctr.SetLabel("Temperature")
sizer.Add(temperature_ctr, flag=wx.EXPAND, border=10)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__ (self, parent) :
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
# List of positions of channels
sizer.Add (wx.StaticText(self, label="Channel number with pure samples for learning"), flag=wx.LEFT, border=5)
self.chanel_odd_experiment_ctrl = wx.TextCtrl (self, value="", style=wx.TE_MULTILINE|wx.EXPAND)
self.chanel_odd_experiment_ctrl.__label__ = "channels"
sizer.Add (self.chanel_odd_experiment_ctrl, flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
# Pulse shaping options
sizer.Add ( wx.StaticText(self, label="Pulse shaping options") )
pulse_shaping_options = {
"amplitude only" :
( 1, lambda ind : ( ind, np.zeros(len(ind)) ) ),
"phase only" :
( 1, lambda ind : ( np.ones(len(ind)), ind ) ),
"amplitude and phase" :
( 2, lambda ind : ( ind[:len(ind)/2], ind[len(ind)/2:] ) )
}
self.Ind_length, self.ind2pulse_shape = zip(*pulse_shaping_options.values())
# Multiplicative factor to determine the number of optimization variables
# controls the size of a single individual, which is equal to ind_len*self.num_pixels
self.Ind_length = dict( zip(pulse_shaping_options.keys(), self.Ind_length) )
# Function converting GA individual to pulse shape
self.ind2pulse_shape = dict( zip(pulse_shaping_options.keys(), self.ind2pulse_shape) )
choices = pulse_shaping_options.keys()
pulse_shaping_ctrl = wx.ComboBox (self, choices=choices, value=choices[0], style=wx.CB_READONLY )
pulse_shaping_ctrl.__label__ = "pulse_shaping_option"
sizer.Add (pulse_shaping_ctrl, flag=wx.EXPAND, border=5)
# Spectrum post-processing options
sizer.Add ( wx.StaticText(self, label="Spectrum post-processing options") )
choices = _SpectrumPostProcess.GetChoices()
spectrum_options_ctrl = wx.ComboBox (self, choices=choices, value=choices[0], style=wx.CB_READONLY )
spectrum_options_ctrl.__label__ = "spectrum_postprocess"
sizer.Add (spectrum_options_ctrl, flag=wx.EXPAND, border=5)
# Fitness function options
sizer.Add ( wx.StaticText(self, label="Fitness function") )
self.fitness_options = {
"determinant" : lambda F : np.abs(np.linalg.det(F)),
"min eigenvalue" : lambda F : np.abs(np.linalg.eigvals(F)).min(),
"max eigenvalue" : lambda F : np.abs(np.linalg.eigvals(F)).max()
}
choices = self.fitness_options.keys()
fitness_options_ctrl = wx.ComboBox (self, choices=choices, value=choices[1], style=wx.CB_READONLY )
fitness_options_ctrl.__label__ = "fitness_options"
sizer.Add (fitness_options_ctrl, flag=wx.EXPAND, border=5)
# Separator
#sizer.Add (wx.StaticText(self), border=5)
# Size of pixel bundle
sizer.Add (wx.StaticText(self, label="\nPixels to bundle"), flag=wx.EXPAND, border=5)
pixel_bundle_width = wx.SpinCtrl(self, value="1", min=1, max=640)
pixel_bundle_width.__label__ = "pixel_bundle_width"
sizer.Add (pixel_bundle_width, flag=wx.EXPAND, border=5)
# Population size
sizer.Add (wx.StaticText(self, label="Population size"), flag=wx.LEFT, border=5)
population_size_ctrl = wx.SpinCtrl (self, value="10", min=1, max=100000)
population_size_ctrl.__label__ = "population_size"
sizer.Add (population_size_ctrl , flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
########################################################################
# Setting characterizing mutation
########################################################################
# sizer.Add (wx.StaticText(self, label="Gaussian mutation:"), flag=wx.LEFT, border=5)
sizer.Add (wx.StaticText(self, label="Gaussian mutation:\nMean"), flag=wx.LEFT, border=5)
mu_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.0, digits=3)
mu_ctrl.__label__ = "gaussian_mutation_mu"
sizer.Add (mu_ctrl , flag=wx.EXPAND, border=5)
sizer.Add (wx.StaticText(self, label="Sigma"), flag=wx.LEFT, border=5)
sigma_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.05, digits=3)
sigma_ctrl.__label__ = "gaussian_mutation_sigma"
sizer.Add (sigma_ctrl , flag=wx.EXPAND, border=5)
sizer.Add (wx.StaticText(self, label="Independent probability for attribute mutation"), flag=wx.LEFT, border=5)
indpb_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=1., digits=3)
indpb_ctrl.__label__ = "mutation_indpb"
sizer.Add (indpb_ctrl, flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
# cxpb - The probability of mating two individuals
sizer.Add (wx.StaticText(self, label="Mating probability"), flag=wx.LEFT, border=5)
cxpb_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.5, digits=3)
cxpb_ctrl.__label__ = "cxpb"
sizer.Add (cxpb_ctrl, flag=wx.EXPAND, border=5)
# mutpb - The probability of mutating an individuals
sizer.Add (wx.StaticText(self, label="Mutating probability"), flag=wx.LEFT, border=5)
mutpb_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.1, digits=3)
mutpb_ctrl.__label__ = "mutpb"
sizer.Add (mutpb_ctrl, flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
# Record background signal
background_signal_button = wx.Button (self, label="Record background")
background_signal_button.Bind ( wx.EVT_BUTTON, self.RecordBackground )
sizer.Add (background_signal_button, flag=wx.EXPAND, border=5)
# ODD GA button
self.odd_ga_button = wx.Button (self)
self.odd_ga_button._start_label = "Start ODD optimization"
self.odd_ga_button._start_method = partial(self.StartOptimization, DoGA=self.DoSingleIterGA_ODD)
self.odd_ga_button._stop_label = "STOP ODD optimization"
self.odd_ga_button.SetLabel (self.odd_ga_button._start_label)
self.odd_ga_button.Bind( wx.EVT_BUTTON, self.odd_ga_button._start_method)
sizer.Add(self.odd_ga_button, flag=wx.EXPAND, border=5)
# Coherently suppress fluorescence button
self.sup_fluor_button = wx.Button (self)
self.sup_fluor_button._start_label = "Start GA to suppress fluorescence"
self.sup_fluor_button._start_method = partial(self.StartOptimization, DoGA=self.DoSingleIterGA_CoherentSuppression)
self.sup_fluor_button._stop_label = "STOP GA to suppress fluorescence"
self.sup_fluor_button.SetLabel (self.sup_fluor_button._start_label)
self.sup_fluor_button.Bind( wx.EVT_BUTTON, self.sup_fluor_button._start_method )
sizer.Add(self.sup_fluor_button, flag=wx.EXPAND, border=5)
###################### Measuring concentrations ######################
sb_sizer = wx.StaticBoxSizer( wx.StaticBox(self, label="Concentration measurements"), wx.VERTICAL )
# List of positions of channels_mixtures
sb_sizer.Add (wx.StaticText(self, label="Channel number to measure concentrations"), flag=wx.LEFT, border=5)
self.channel_mixtues_ctrl = wx.TextCtrl (self, value="", style=wx.TE_MULTILINE|wx.EXPAND)
self.channel_mixtues_ctrl.__label__ = "channels_mixtures"
sb_sizer.Add (self.channel_mixtues_ctrl, flag=wx.EXPAND, border=5)
# ODD GA file
sb_sizer.Add (wx.StaticText(self, label="ODD GA file"), flag=wx.LEFT, border=5)
odd_ga_file_ctr = wx.FilePickerCtrl(self, message="Chose file containing optimization data...")
odd_ga_file_ctr.__label__ = "odd_ga_file_name"
sb_sizer.Add (odd_ga_file_ctr, flag=wx.EXPAND, border=5)
# Number of pulses to be used
sb_sizer.Add (wx.StaticText(self, label="Number of pulses to interrogate"), flag=wx.LEFT, border=5)
num_pulses_ctrl = wx.SpinCtrl (self, value="10", min=1, max=100000)
num_pulses_ctrl.__label__ = "num_pulses"
sb_sizer.Add (num_pulses_ctrl , flag=wx.EXPAND, border=5)
# Measure concentration button (OLD way)
measure_concentr_button = wx.Button (self)
measure_concentr_button._start_label = "OLD Measure concentration"
measure_concentr_button._start_method = self.Old_MeasureConcentration
measure_concentr_button._stop_label = "STOP measuring concentration"
measure_concentr_button._stop_method = self.Stop_MeasureConcentration
measure_concentr_button.SetLabel (measure_concentr_button._start_label)
measure_concentr_button.Bind (wx.EVT_BUTTON, measure_concentr_button._start_method)
sb_sizer.Add(measure_concentr_button, flag=wx.EXPAND, border=5)
# Measure concentration button (NEW way)
measure_concentr_button = wx.Button (self)
measure_concentr_button._start_label = "Measure concentration"
measure_concentr_button._start_method = self.MeasureConcentration
measure_concentr_button._stop_label = "STOP measuring concentration"
measure_concentr_button._stop_method = self.Stop_MeasureConcentration
measure_concentr_button.SetLabel (measure_concentr_button._start_label)
measure_concentr_button.Bind (wx.EVT_BUTTON, measure_concentr_button._start_method)
sb_sizer.Add(measure_concentr_button, flag=wx.EXPAND, border=5)
sizer.Add (sb_sizer, flag=wx.EXPAND, border=5)
######################################################################
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent, **kwards):
HardwareGUIControl.__init__(self,
parent,
manager_cls=ManagerPicoHarp,
**kwards)
sizer = wx.BoxSizer(wx.VERTICAL)
# Offset
sizer.Add(wx.StaticText(self, label="Offset (ns)"),
flag=wx.LEFT | wx.TOP,
border=5)
offset_ctrl = wx.SpinCtrl(self, value="0", min=0, max=1e6)
offset_ctrl.__label__ = "offset"
sizer.Add(offset_ctrl, flag=wx.EXPAND, border=5)
# Enable interactive update
offset_ctrl.Bind(
wx.EVT_SPINCTRL,
functools.partial(self.UpdateProperty, offset_ctrl,
"UpdateOffset"))
# Zero level of channel 0
sizer.Add(wx.StaticText(self, label="\nCFDZeroX0 (mV)"),
flag=wx.LEFT,
border=5)
CFDZeroX0_ctrl = wx.SpinCtrl(self, value="10", min=0, max=1e3)
CFDZeroX0_ctrl.__label__ = "cfdzerox0"
sizer.Add(CFDZeroX0_ctrl, flag=wx.EXPAND, border=5)
# Enable interactive update
CFDZeroX0_ctrl.Bind(
wx.EVT_SPINCTRL,
functools.partial(self.UpdateProperty, CFDZeroX0_ctrl,
"UpdateCFDZero0"))
# One level for channel 0
sizer.Add(wx.StaticText(self, label="CFDLevel0 (mV)"),
flag=wx.LEFT,
border=5)
CFDLevel0_ctrl = wx.SpinCtrl(self, value="80", min=0, max=1e3)
CFDLevel0_ctrl.__label__ = "cfdlevelx0"
sizer.Add(CFDLevel0_ctrl, flag=wx.EXPAND, border=5)
# Enable interactive update
CFDLevel0_ctrl.Bind(
wx.EVT_SPINCTRL,
functools.partial(self.UpdateProperty, CFDLevel0_ctrl,
"UpdateCFDLevel0"))
# Zero level of channel 1
sizer.Add(wx.StaticText(self, label="\nCFDZeroX1 (mV)"),
flag=wx.LEFT,
border=5)
CFDZeroX1_ctrl = wx.SpinCtrl(self, value="10", min=0, max=1e3)
CFDZeroX1_ctrl.__label__ = "cfdzerox1"
sizer.Add(CFDZeroX1_ctrl, flag=wx.EXPAND, border=5)
# Enable interactive update
CFDZeroX1_ctrl.Bind(
wx.EVT_SPINCTRL,
functools.partial(self.UpdateProperty, CFDZeroX1_ctrl,
"UpdateCFDZero1"))
# One level for channel 1
sizer.Add(wx.StaticText(self, label="CFDLevel1 (mV)"),
flag=wx.LEFT,
border=5)
CFDLevel1_ctrl = wx.SpinCtrl(self, value="80", min=0, max=1e3)
CFDLevel1_ctrl.__label__ = "cfdlevelx1"
sizer.Add(CFDLevel1_ctrl, flag=wx.EXPAND, border=5)
# Enable interactive update
CFDLevel1_ctrl.Bind(
wx.EVT_SPINCTRL,
functools.partial(self.UpdateProperty, CFDLevel1_ctrl,
"UpdateCFDLevel1"))
# Divider
sizer.Add(wx.StaticText(self, label="\nDivider"),
flag=wx.LEFT,
border=5)
syncdiv_ctrl = wx.SpinCtrl(self, value="8", min=1, max=1e3)
syncdiv_ctrl.__label__ = "syncdiv"
sizer.Add(syncdiv_ctrl, flag=wx.EXPAND, border=5)
# Enable interactive update
syncdiv_ctrl.Bind(
wx.EVT_SPINCTRL,
functools.partial(self.UpdateProperty, syncdiv_ctrl,
"UpdateSyncDiv"))
# Range
sizer.Add(wx.StaticText(self, label="\nRange"), flag=wx.LEFT, border=5)
range_ctrl = wx.SpinCtrl(self, value="2", min=0, max=1e6)
range_ctrl.__label__ = "range"
sizer.Add(range_ctrl, flag=wx.EXPAND, border=5)
# Enable interactive update
range_ctrl.Bind(
wx.EVT_SPINCTRL,
functools.partial(self.UpdateProperty, range_ctrl, "UpdateRange"))
# Acquisition time
sizer.Add(wx.StaticText(self, label="\nAcquisition time (ms)"),
flag=wx.LEFT,
border=5)
tacq_ctrl = wx.SpinCtrl(self, value="1000", min=100, max=1e6)
tacq_ctrl.__label__ = "tacq"
sizer.Add(tacq_ctrl, flag=wx.EXPAND, border=5)
# Enable interactive update
tacq_ctrl.Bind(
wx.EVT_SPINCTRL,
functools.partial(self.UpdateProperty, tacq_ctrl, "UpdateTacq"))
# Spacer
sizer.Add(wx.StaticText(self, label=""), flag=wx.LEFT, border=5)
# Button for displaying histogram
show_histogram_button = MultiStateButton(
self,
states=[(self.StartShowingHistogram, "Show histogram"),
(self.StopShowingHistogram, "STOP histogram")])
sizer.Add(show_histogram_button, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent, dev):
HardwareGUIControl.__init__(self, parent, dev)
sizer = wx.BoxSizer(wx.VERTICAL)
# Specify the communication port name
sizer.Add(wx.StaticText(self, label="Communication port"),
flag=wx.LEFT,
border=5)
port_name = wx.TextCtrl(self, value="COM15")
port_name.__label__ = "port"
sizer.Add(port_name, flag=wx.EXPAND, border=5)
# How long to wait after new pulse shape was sent
sizer.Add(wx.StaticText(self, label="\nWait to update (ms)"),
flag=wx.LEFT,
border=5)
update_time_delay_ctr = wx.SpinCtrl(self, value="50", min=0, max=10000)
update_time_delay_ctr.__label__ = "update_time_delay"
sizer.Add(update_time_delay_ctr, flag=wx.EXPAND, border=5)
# Calibration file
sizer.Add(wx.StaticText(self, label="\nCalibration file"),
flag=wx.LEFT,
border=5)
calibration_file_ctr = wx.FilePickerCtrl(
self, message="Chose pulse shaper calibration file...")
calibration_file_ctr.__label__ = "calibration_file_name"
sizer.Add(calibration_file_ctr, flag=wx.EXPAND, border=5)
# Select how to utilize calibration information
sizer.Add(wx.StaticText(
self, label="\nAmplitude/phase to voltage conversion"),
flag=wx.LEFT,
border=5)
choices = AmplPhase2ShaperMasks.Choices()
amplphase_convertion_ctrl = wx.ComboBox(self,
choices=choices,
value=choices[0],
style=wx.CB_READONLY)
amplphase_convertion_ctrl.__label__ = "amplphase2shapermasks"
sizer.Add(amplphase_convertion_ctrl, flag=wx.EXPAND, border=5)
# Transform limited phase
sizer.Add(wx.StaticText(
self, label="\nTrasform limited phase (multi-line text)"),
flag=wx.LEFT,
border=5)
self.transform_lim_phase_ctrl = wx.TextCtrl(self,
style=wx.TE_MULTILINE)
self.transform_lim_phase_ctrl.__label__ = "transform_limited_phase"
sizer.Add(self.transform_lim_phase_ctrl, flag=wx.EXPAND, border=5)
# Button to load transform limited phase
load_tl_ctrl = wx.Button(self, label="Load transform limited phase")
load_tl_ctrl.Bind(wx.EVT_BUTTON, self.LoadTransformLimited)
sizer.Add(load_tl_ctrl, flag=wx.EXPAND, border=5)
# Amplitude correction
sizer.Add(wx.StaticText(
self, label="\nAmplitude correction (multi-line text)"),
flag=wx.LEFT,
border=5)
self.ampl_correction_ctrl = wx.TextCtrl(self, style=wx.TE_MULTILINE)
self.ampl_correction_ctrl.__label__ = "ampl_correction"
sizer.Add(self.ampl_correction_ctrl, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent, dev):
HardwareGUIControl.__init__(self, parent, dev)
sizer = wx.BoxSizer(wx.VERTICAL)
################################################
sizer.Add(wx.StaticText(self, label="Exposure time (millisecond)"),
flag=wx.LEFT,
border=5)
exposure_time_ctr = wx.SpinCtrl(self, value="20", min=1, max=1e6)
exposure_time_ctr.SetLabel("Exposure time")
sizer.Add(exposure_time_ctr, flag=wx.EXPAND, border=5)
################################################
sizer.Add(wx.StaticText(self, label="Scans to average"),
flag=wx.LEFT,
border=5)
scans_average_ctr = wx.SpinCtrl(self, value="1", min=1, max=1e6)
scans_average_ctr.SetLabel("scans_average")
sizer.Add(scans_average_ctr, flag=wx.EXPAND, border=5)
################################################
sizer.Add(wx.StaticText(self, label="\nStart wavelength (nm)"),
flag=wx.LEFT,
border=5)
start_wavelength_ctr = wx.SpinCtrl(self, value="196", min=1, max=1e6)
#start_wavelength_ctr = wx.SpinCtrl (self, value="580", min=1, max=1e6)
start_wavelength_ctr.SetLabel("start_wavelength")
sizer.Add(start_wavelength_ctr, flag=wx.EXPAND, border=5)
################################################
sizer.Add(wx.StaticText(self, label="End wavelength (nm)"),
flag=wx.LEFT,
border=5)
end_wavelength_ctr = wx.SpinCtrl(self, value="1118", min=1, max=1e6)
#end_wavelength_ctr = wx.SpinCtrl (self, value="680", min=1, max=1e6)
end_wavelength_ctr.SetLabel("end_wavelength")
sizer.Add(end_wavelength_ctr, flag=wx.EXPAND, border=5)
############ Parameters for displaying spectrum #############
# Spacer
sizer.Add(wx.StaticText(self), flag=wx.LEFT, border=5)
sb_sizer = wx.StaticBoxSizer(
wx.StaticBox(self, label="Plotting options"), wx.VERTICAL)
fix_vert_ax_ctrl = wx.CheckBox(self, label="Fix vertical axis")
fix_vert_ax_ctrl.__label__ = "fix_vertical_axis"
sb_sizer.Add(fix_vert_ax_ctrl, flag=wx.EXPAND, border=5)
sb_sizer.Add(wx.StaticText(self, label="max val"),
flag=wx.LEFT,
border=5)
max_val_ctr = wx.SpinCtrl(self, value="50000", min=1, max=1e6)
max_val_ctr.SetLabel("vertical_axis_max_val")
sb_sizer.Add(max_val_ctr, flag=wx.EXPAND, border=5)
sb_sizer.Add(wx.StaticText(self, label="min val"),
flag=wx.LEFT,
border=5)
min_val_ctr = wx.SpinCtrl(self, value="100", min=1, max=1e6)
min_val_ctr.SetLabel("vertical_axis_min_val")
sb_sizer.Add(min_val_ctr, flag=wx.EXPAND, border=5)
sizer.Add(sb_sizer, flag=wx.EXPAND, border=5)
################################################
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent, dev) :
"""
`dev` is a sample switcher manager
"""
HardwareGUIControl.__init__(self, parent, dev)
sizer = wx.BoxSizer(wx.VERTICAL)
# Specify the communication port name
sizer.Add (wx.StaticText(self, label="Communication port"), flag=wx.LEFT, border=5)
port_name = wx.TextCtrl (self, value="COM1")
port_name.__label__ = "port"
sizer.Add (port_name, flag=wx.EXPAND, border=5)
# List of positions of channels
sizer.Add (wx.StaticText(self, label="Position of channels"), flag=wx.LEFT, border=5)
self.chanel_positions_ctrl = wx.TextCtrl (self, value="", style=wx.TE_MULTILINE|wx.EXPAND)
self.chanel_positions_ctrl.__label__ = "chanel_positions"
sizer.Add (self.chanel_positions_ctrl, flag=wx.EXPAND, border=5)
# Spacer
sizer.Add (wx.StaticText(self), flag=wx.LEFT, border=5)
##################### Parameters for automatic calibration #######################
sb_sizer = wx.StaticBoxSizer( wx.StaticBox(self, label="Automatic calibration"), wx.VERTICAL )
# Starting position for scanning
sb_sizer.Add ( wx.StaticText(self, label="Beginning of scanning range (mm)") )
init_scan_pos_ctrl = wxFloatSpin (self, increment=0.01, value=16, digits=3)
init_scan_pos_ctrl.__label__ = "initial_scan_position"
sb_sizer.Add (init_scan_pos_ctrl, flag=wx.EXPAND, border=5)
# Final position for scanning
sb_sizer.Add ( wx.StaticText(self, label="End of scanning range (mm)") )
fin_scan_pos_ctrl = wxFloatSpin (self, increment=0.01, value=80., digits=3)
fin_scan_pos_ctrl.__label__ = "final_scan_position"
sb_sizer.Add (fin_scan_pos_ctrl, flag=wx.EXPAND, border=5)
# Scanning step size
sb_sizer.Add ( wx.StaticText(self, label="Scanning step size (mm)") )
scan_step_size_ctrl = wxFloatSpin (self, increment=0.001, value=0.08, digits=3, min_val=0.001, max_val=1)
scan_step_size_ctrl.__label__ = "scan_step"
sb_sizer.Add (scan_step_size_ctrl, flag=wx.EXPAND, border=5)
# Threshold to recognize peaks
sb_sizer.Add ( wx.StaticText(self, label="Background signal cut-off") )
background_cutoff_ctrl = wxFloatSpin (self, increment=0.01, value=0.9, digits=3, min_val=0, max_val=1)
background_cutoff_ctrl.__label__ = "background_cutoff"
sb_sizer.Add (background_cutoff_ctrl, flag=wx.EXPAND, border=5)
# Methods to find peaks
sb_sizer.Add ( wx.StaticText(self, label="Peak finding method") )
self.peak_finders = {
"total fluoresce" :
lambda x : np.copy(x),
"log(total fluoresce)" :
lambda x : np.log10(x),
"diff(total fluoresce)" :
lambda x : gaussian_filter( np.abs(gaussian_filter(x, sigma=1, order=1)), sigma=1 ),
"log(diff(total fluoresce))" :
lambda x : gaussian_filter( np.log10(np.abs(gaussian_filter(x, sigma=1, order=1))), sigma=1 ),
"diff(log(total fluoresce))" :
lambda x : gaussian_filter( np.abs(gaussian_filter(np.log10(x), sigma=1, order=1)), sigma=1 )
}
choices = list(self.peak_finders.keys())
peak_finder_ctrl = wx.ComboBox (self, choices=choices, value=choices[0], style=wx.CB_READONLY )
peak_finder_ctrl.__label__ = "peak_finder"
sb_sizer.Add (peak_finder_ctrl, flag=wx.EXPAND, border=5)
# Spacer
sb_sizer.Add (wx.StaticText(self), flag=wx.LEFT, border=5)
# Calibrate button
calibrate_button = wx.Button (self)
calibrate_button._start_label ="Scan and calibrate"
calibrate_button._stop_label ="STOP calibration"
calibrate_button.SetLabel (calibrate_button._start_label)
calibrate_button._start_method = self.CalibrateSampleSwitcher
calibrate_button._stop_method = self.StopCalibration
calibrate_button.Bind (wx.EVT_BUTTON, calibrate_button._start_method)
sb_sizer.Add (calibrate_button, flag=wx.EXPAND, border=5)
# Re-analysed calibration data
analyse_button = wx.Button (self, label="Re-calibrate without scanning")
analyse_button.Bind (wx.EVT_BUTTON, self.AnalyzeTotalFluorescence)
sb_sizer.Add (analyse_button, flag=wx.EXPAND, border=5)
sizer.Add(sb_sizer, flag=wx.EXPAND, border=5)
# Spacer
sizer.Add (wx.StaticText(self), flag=wx.LEFT, border=5)
##################### Parameters for automatic calibration #######################
sb_sizer = wx.StaticBoxSizer( wx.StaticBox(self, label="Move to"), wx.VERTICAL )
sb_sizer.Add ( wx.StaticText(self, label="Position") )
self.moving_stage_position_ctrl = wxFloatSpin (self, increment=0.01, value=80., digits=5)
self.moving_stage_position_ctrl.__label__ = "move_to_position"
sb_sizer.Add (self.moving_stage_position_ctrl, flag=wx.EXPAND, border=5)
# Update current position button
def OnGetCurrentPosition (event) :
if self.dev.Initialize( self.GetSettings() ) == RETURN_FAIL : return
self.moving_stage_position_ctrl.SetValue( self.dev.GetCurrentPosition() )
get_current_possition_button = wx.Button (self, label="Get current position")
get_current_possition_button.Bind (wx.EVT_BUTTON, OnGetCurrentPosition)
sb_sizer.Add (get_current_possition_button, flag=wx.EXPAND, border=5)
# Move-to position button
def OnMoveTo (event) :
if self.dev.Initialize( self.GetSettings() ) == RETURN_FAIL : return
self.dev.MoveTo( self.moving_stage_position_ctrl.GetValue() )
move_to_button = wx.Button (self, label="Go to")
move_to_button.Bind (wx.EVT_BUTTON, OnMoveTo)
sb_sizer.Add (move_to_button, flag=wx.EXPAND, border=5)
# Spacer
sb_sizer.Add (wx.StaticText(self), flag=wx.LEFT, border=5)
# Go to sample button
def OnMoveToSample (event) :
if self.dev.Initialize( self.GetSettings() ) == RETURN_FAIL : return
button = event.GetEventObject()
# Get current sample number
label_split = button.GetLabel().split()
sample_num = int(label_split[-1])
# Get next sample number
sample_num = (sample_num + 1) % self.dev.GetChannelNum()
# Go to the sample
self.dev.MoveToChannel( sample_num )
# Update the label
label_split[-1] = str(sample_num)
button.SetLabel( " ".join(label_split) )
move_to_sample = wx.Button (self, label="Go to sample 0")
move_to_sample.Bind (wx.EVT_BUTTON, OnMoveToSample)
sb_sizer.Add (move_to_sample, flag=wx.EXPAND, border=5)
sizer.Add(sb_sizer, flag=wx.EXPAND, border=5)
###################################################################################
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent):
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
# Separator
sizer.Add(wx.StaticText(self), border=5)
# Pulse shaping options
sizer.Add(wx.StaticText(self, label="Pulse shaping options"))
pulse_shaping_options = {
"amplitude only": (1, lambda ind: (ind, np.zeros(len(ind)))),
"phase only": (1, lambda ind: (np.ones(len(ind)), ind)),
"amplitude and phase": (2, lambda ind:
(ind[:len(ind) / 2], ind[len(ind) / 2:]))
}
self.Ind_length, self.ind2pulse_shape = zip(
*pulse_shaping_options.values())
# Multiplicative factor to determine the number of optimization variables
# controls the size of a single individual, which is equal to ind_len*self.num_pixels
self.Ind_length = dict(
zip(pulse_shaping_options.keys(), self.Ind_length))
# Function converting GA individual to pulse shape
self.ind2pulse_shape = dict(
zip(pulse_shaping_options.keys(), self.ind2pulse_shape))
choices = pulse_shaping_options.keys()
pulse_shaping_ctrl = wx.ComboBox(self,
choices=choices,
value=choices[0],
style=wx.CB_READONLY)
pulse_shaping_ctrl.__label__ = "pulse_shaping_option"
sizer.Add(pulse_shaping_ctrl, flag=wx.EXPAND, border=5)
# Spectrum post-processing options
sizer.Add(wx.StaticText(self,
label="Spectrum post-processing options"))
choices = _SpectrumPostProcess.GetChoices()
spectrum_options_ctrl = wx.ComboBox(self,
choices=choices,
value=choices[0],
style=wx.CB_READONLY)
spectrum_options_ctrl.__label__ = "spectrum_postprocess"
sizer.Add(spectrum_options_ctrl, flag=wx.EXPAND, border=5)
# Separator
#sizer.Add (wx.StaticText(self), border=5)
# Size of pixel bundle
sizer.Add(wx.StaticText(self, label="\nPixels to bundle"),
flag=wx.EXPAND,
border=5)
pixel_bundle_width = wx.SpinCtrl(self, value="1", min=1, max=640)
pixel_bundle_width.__label__ = "pixel_bundle_width"
sizer.Add(pixel_bundle_width, flag=wx.EXPAND, border=5)
# Population size
sizer.Add(wx.StaticText(self, label="Population size"),
flag=wx.LEFT,
border=5)
population_size_ctrl = wx.SpinCtrl(self, value="10", min=1, max=100000)
population_size_ctrl.__label__ = "population_size"
sizer.Add(population_size_ctrl, flag=wx.EXPAND, border=5)
# Separator
sizer.Add(wx.StaticText(self), border=5)
########################################################################
# Setting characterizing mutation
########################################################################
# sizer.Add (wx.StaticText(self, label="Gaussian mutation:"), flag=wx.LEFT, border=5)
sizer.Add(wx.StaticText(self, label="Gaussian mutation:\nMean"),
flag=wx.LEFT,
border=5)
mu_ctrl = wxFloatSpin(self,
min_val=0,
max_val=1,
increment=0.01,
value=0.0,
digits=3)
mu_ctrl.__label__ = "gaussian_mutation_mu"
sizer.Add(mu_ctrl, flag=wx.EXPAND, border=5)
sizer.Add(wx.StaticText(self, label="Sigma"), flag=wx.LEFT, border=5)
sigma_ctrl = wxFloatSpin(self,
min_val=0,
max_val=1,
increment=0.01,
value=0.05,
digits=3)
sigma_ctrl.__label__ = "gaussian_mutation_sigma"
sizer.Add(sigma_ctrl, flag=wx.EXPAND, border=5)
sizer.Add(wx.StaticText(
self, label="Independent probability for attribute mutation"),
flag=wx.LEFT,
border=5)
indpb_ctrl = wxFloatSpin(self,
min_val=0,
max_val=1,
increment=0.01,
value=1.,
digits=3)
indpb_ctrl.__label__ = "mutation_indpb"
sizer.Add(indpb_ctrl, flag=wx.EXPAND, border=5)
# Separator
sizer.Add(wx.StaticText(self), border=5)
# cxpb - The probability of mating two individuals
sizer.Add(wx.StaticText(self, label="Mating probability"),
flag=wx.LEFT,
border=5)
cxpb_ctrl = wxFloatSpin(self,
min_val=0,
max_val=1,
increment=0.01,
value=0.5,
digits=3)
cxpb_ctrl.__label__ = "cxpb"
sizer.Add(cxpb_ctrl, flag=wx.EXPAND, border=5)
# mutpb - The probability of mutating an individuals
sizer.Add(wx.StaticText(self, label="Mutating probability"),
flag=wx.LEFT,
border=5)
mutpb_ctrl = wxFloatSpin(self,
min_val=0,
max_val=1,
increment=0.01,
value=0.1,
digits=3)
mutpb_ctrl.__label__ = "mutpb"
sizer.Add(mutpb_ctrl, flag=wx.EXPAND, border=5)
# Separator
sizer.Add(wx.StaticText(self), border=5)
# Record background signal
background_signal_button = wx.Button(self, label="Record background")
background_signal_button.Bind(wx.EVT_BUTTON, self.RecordBackground)
sizer.Add(background_signal_button, flag=wx.EXPAND, border=5)
# Coherently suppress fluorescence button
self.max_shg_button = wx.Button(self)
self.max_shg_button._start_label = "Start GA to maximize SHG"
self.max_shg_button._start_method = partial(
self.StartOptimization, DoGA=self.DoSingleIterGA_SHGMaximize)
self.max_shg_button._stop_label = "STOP GA to maximize SHG"
self.max_shg_button.SetLabel(self.max_shg_button._start_label)
self.max_shg_button.Bind(wx.EVT_BUTTON,
self.max_shg_button._start_method)
sizer.Add(self.max_shg_button, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent, dev):
"""
`dev` is a sample switcher manager
"""
HardwareGUIControl.__init__(self, parent, dev)
sizer = wx.BoxSizer(wx.VERTICAL)
# Specify the communication port name
sizer.Add(wx.StaticText(self, label="Communication port"),
flag=wx.LEFT,
border=5)
port_name = wx.TextCtrl(self, value="COM1")
port_name.__label__ = "port"
sizer.Add(port_name, flag=wx.EXPAND, border=5)
# List of positions of channels
sizer.Add(wx.StaticText(self, label="Position of channels"),
flag=wx.LEFT,
border=5)
self.chanel_positions_ctrl = wx.TextCtrl(self,
value="",
style=wx.TE_MULTILINE
| wx.EXPAND)
self.chanel_positions_ctrl.__label__ = "chanel_positions"
sizer.Add(self.chanel_positions_ctrl, flag=wx.EXPAND, border=5)
# Spacer
sizer.Add(wx.StaticText(self), flag=wx.LEFT, border=5)
##################### Parameters for automatic calibration #######################
sb_sizer = wx.StaticBoxSizer(
wx.StaticBox(self, label="Automatic calibration"), wx.VERTICAL)
# Starting position for scanning
sb_sizer.Add(
wx.StaticText(self, label="Beginning of scanning range (mm)"))
init_scan_pos_ctrl = wxFloatSpin(self,
increment=0.01,
value=16,
digits=3)
init_scan_pos_ctrl.__label__ = "initial_scan_position"
sb_sizer.Add(init_scan_pos_ctrl, flag=wx.EXPAND, border=5)
# Final position for scanning
sb_sizer.Add(wx.StaticText(self, label="End of scanning range (mm)"))
fin_scan_pos_ctrl = wxFloatSpin(self,
increment=0.01,
value=80.,
digits=3)
fin_scan_pos_ctrl.__label__ = "final_scan_position"
sb_sizer.Add(fin_scan_pos_ctrl, flag=wx.EXPAND, border=5)
# Scanning step size
sb_sizer.Add(wx.StaticText(self, label="Scanning step size (mm)"))
scan_step_size_ctrl = wxFloatSpin(self,
increment=0.001,
value=0.08,
digits=3,
min_val=0.001,
max_val=1)
scan_step_size_ctrl.__label__ = "scan_step"
sb_sizer.Add(scan_step_size_ctrl, flag=wx.EXPAND, border=5)
# Threshold to recognize peaks
sb_sizer.Add(wx.StaticText(self, label="Background signal cut-off"))
background_cutoff_ctrl = wxFloatSpin(self,
increment=0.01,
value=0.9,
digits=3,
min_val=0,
max_val=1)
background_cutoff_ctrl.__label__ = "background_cutoff"
sb_sizer.Add(background_cutoff_ctrl, flag=wx.EXPAND, border=5)
# Methods to find peaks
sb_sizer.Add(wx.StaticText(self, label="Peak finding method"))
self.peak_finders = {
"total fluoresce":
lambda x: np.copy(x),
"log(total fluoresce)":
lambda x: np.log10(x),
"diff(total fluoresce)":
lambda x: gaussian_filter(
np.abs(gaussian_filter(x, sigma=1, order=1)), sigma=1),
"log(diff(total fluoresce))":
lambda x: gaussian_filter(np.log10(
np.abs(gaussian_filter(x, sigma=1, order=1))),
sigma=1),
"diff(log(total fluoresce))":
lambda x: gaussian_filter(np.abs(
gaussian_filter(np.log10(x), sigma=1, order=1)),
sigma=1)
}
choices = list(self.peak_finders.keys())
peak_finder_ctrl = wx.ComboBox(self,
choices=choices,
value=choices[0],
style=wx.CB_READONLY)
peak_finder_ctrl.__label__ = "peak_finder"
sb_sizer.Add(peak_finder_ctrl, flag=wx.EXPAND, border=5)
# Spacer
sb_sizer.Add(wx.StaticText(self), flag=wx.LEFT, border=5)
# Calibrate button
calibrate_button = wx.Button(self)
calibrate_button._start_label = "Scan and calibrate"
calibrate_button._stop_label = "STOP calibration"
calibrate_button.SetLabel(calibrate_button._start_label)
calibrate_button._start_method = self.CalibrateSampleSwitcher
calibrate_button._stop_method = self.StopCalibration
calibrate_button.Bind(wx.EVT_BUTTON, calibrate_button._start_method)
sb_sizer.Add(calibrate_button, flag=wx.EXPAND, border=5)
# Re-analysed calibration data
analyse_button = wx.Button(self, label="Re-calibrate without scanning")
analyse_button.Bind(wx.EVT_BUTTON, self.AnalyzeTotalFluorescence)
sb_sizer.Add(analyse_button, flag=wx.EXPAND, border=5)
sizer.Add(sb_sizer, flag=wx.EXPAND, border=5)
# Spacer
sizer.Add(wx.StaticText(self), flag=wx.LEFT, border=5)
##################### Parameters for automatic calibration #######################
sb_sizer = wx.StaticBoxSizer(wx.StaticBox(self, label="Move to"),
wx.VERTICAL)
sb_sizer.Add(wx.StaticText(self, label="Position"))
self.moving_stage_position_ctrl = wxFloatSpin(self,
increment=0.01,
value=80.,
digits=5)
self.moving_stage_position_ctrl.__label__ = "move_to_position"
sb_sizer.Add(self.moving_stage_position_ctrl, flag=wx.EXPAND, border=5)
# Update current position button
def OnGetCurrentPosition(event):
if self.dev.Initialize(self.GetSettings()) == RETURN_FAIL: return
self.moving_stage_position_ctrl.SetValue(
self.dev.GetCurrentPosition())
get_current_possition_button = wx.Button(self,
label="Get current position")
get_current_possition_button.Bind(wx.EVT_BUTTON, OnGetCurrentPosition)
sb_sizer.Add(get_current_possition_button, flag=wx.EXPAND, border=5)
# Move-to position button
def OnMoveTo(event):
if self.dev.Initialize(self.GetSettings()) == RETURN_FAIL: return
self.dev.MoveTo(self.moving_stage_position_ctrl.GetValue())
move_to_button = wx.Button(self, label="Go to")
move_to_button.Bind(wx.EVT_BUTTON, OnMoveTo)
sb_sizer.Add(move_to_button, flag=wx.EXPAND, border=5)
# Spacer
sb_sizer.Add(wx.StaticText(self), flag=wx.LEFT, border=5)
# Go to sample button
def OnMoveToSample(event):
if self.dev.Initialize(self.GetSettings()) == RETURN_FAIL: return
button = event.GetEventObject()
# Get current sample number
label_split = button.GetLabel().split()
sample_num = int(label_split[-1])
# Get next sample number
sample_num = (sample_num + 1) % self.dev.GetChannelNum()
# Go to the sample
self.dev.MoveToChannel(sample_num)
# Update the label
label_split[-1] = str(sample_num)
button.SetLabel(" ".join(label_split))
move_to_sample = wx.Button(self, label="Go to sample 0")
move_to_sample.Bind(wx.EVT_BUTTON, OnMoveToSample)
sb_sizer.Add(move_to_sample, flag=wx.EXPAND, border=5)
sizer.Add(sb_sizer, flag=wx.EXPAND, border=5)
###################################################################################
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent):
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
# Starting pixel to calibrate
sizer.Add(wx.StaticText(self, label="Initial pixel"),
flag=wx.LEFT,
border=5)
initial_pixel_ctr = wx.SpinCtrl(self, value="0", min=0, max=640)
initial_pixel_ctr.SetLabel("initial pixel")
sizer.Add(initial_pixel_ctr, flag=wx.EXPAND, border=5)
# Final pixel to calibrate
sizer.Add(wx.StaticText(self, label="Final pixel"),
flag=wx.LEFT,
border=5)
final_pixel_ctr = wx.SpinCtrl(self, value="640", min=0, max=640)
final_pixel_ctr.SetLabel("final pixel")
sizer.Add(final_pixel_ctr, flag=wx.EXPAND, border=5)
# Size of pixel bundle
sizer.Add(wx.StaticText(self, label="\nPixels to bundle"),
flag=wx.EXPAND,
border=5)
self.pixel_bundle_width = wx.SpinCtrl(self, value="1", min=1, max=640)
self.pixel_bundle_width.SetLabel("pixel bundle width")
sizer.Add(self.pixel_bundle_width, flag=wx.EXPAND, border=5)
# Correspondence between wavelength and pulse shaper pixel number
# entered as dictionary without the "{}"
sizer.Add(wx.StaticText(
self,
label=
"\nPixel to wavelength entered as \n<pixel1> : <lambda1>,\n<pixel2> : <lambda2>, etc."
),
flag=wx.EXPAND,
border=5)
pixel2lambda_ctrl = wx.TextCtrl(self,
value="",
style=wx.TE_MULTILINE | wx.EXPAND)
pixel2lambda_ctrl.__label__ = "pixel_to_lamba"
sizer.Add(pixel2lambda_ctrl, flag=wx.EXPAND, border=5)
# Initial voltage
sizer.Add(wx.StaticText(self, label="\nInitial voltage"),
flag=wx.LEFT,
border=5)
initial_voltage_ctr = wx.SpinCtrl(self,
value="500",
min=0,
max=PULSESHAPER_MAX_VAL)
initial_voltage_ctr.SetLabel("initial voltage")
sizer.Add(initial_voltage_ctr, flag=wx.EXPAND, border=5)
# Final voltage
sizer.Add(wx.StaticText(self, label="Final voltage"),
flag=wx.LEFT,
border=5)
final_voltage_ctr = wx.SpinCtrl(self,
value="800",
min=0,
max=PULSESHAPER_MAX_VAL)
final_voltage_ctr.SetLabel("final voltage")
sizer.Add(final_voltage_ctr, flag=wx.EXPAND, border=5)
# Voltage step size
sizer.Add(wx.StaticText(self, label="Voltage scanning step"),
flag=wx.LEFT,
border=5)
voltage_step_ctr = wx.SpinCtrl(self,
value="10",
min=0,
max=PULSESHAPER_MAX_VAL)
voltage_step_ctr.SetLabel("voltage step")
sizer.Add(voltage_step_ctr, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent) :
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
dw, dh = wx.DisplaySize()
############################################################################
#
# Geometry settings
#
############################################################################
boxsizer = wx.StaticBoxSizer(wx.StaticBox(self, label="Scanning geometry"), wx.VERTICAL)
# Upper layer of points
boxsizer.Add (wx.StaticText(self, label="Upper layer of points"), flag=wx.LEFT, border=5)
self.upper_points_ctrl = wx.TextCtrl(self, style=wx.TE_MULTILINE, size=(0.1*dw, 0.15*dh))
self.upper_points_ctrl.__label__ = "upper_points"
boxsizer.Add(self.upper_points_ctrl)
# Button to add point to upper layer
add_upper_point_btn = wx.Button(self, label="Add point to upper layer")
add_upper_point_btn.Bind( wx.EVT_BUTTON,
functools.partial(self.AddPoint, points_ctrl=self.upper_points_ctrl)
)
boxsizer.Add(add_upper_point_btn, flag=wx.EXPAND, border=5)
# Lower layer of points
boxsizer.Add (wx.StaticText(self, label="\nLower layer of points"), flag=wx.LEFT, border=5)
self.lower_points_ctrl = wx.TextCtrl(self, style=wx.TE_MULTILINE, size=(0.1*dw, 0.15*dh))
self.lower_points_ctrl.__label__ = "lower_points"
boxsizer.Add(self.lower_points_ctrl)
# Button to add point to lower layer
add_lower_point_btn = wx.Button(self, label="Add point to lower layer")
add_lower_point_btn.Bind( wx.EVT_BUTTON,
functools.partial(self.AddPoint, points_ctrl=self.lower_points_ctrl)
)
boxsizer.Add(add_lower_point_btn, flag=wx.EXPAND, border=5)
# Initialize container for points and corresponding photos
self.points = {}
# Spacer
boxsizer.Add (wx.StaticText(self, label=""), flag=wx.LEFT, border=5)
# Delete all points button
clear_all_points_btn = wx.Button(self, label="Delete all points")
clear_all_points_btn.Bind (wx.EVT_BUTTON, self.ClearAllPoints)
boxsizer.Add (clear_all_points_btn, flag=wx.EXPAND, border=5)
sizer.Add (boxsizer, flag=wx.EXPAND, border=10)
############################################################################
#
# MySQL settings
#
############################################################################
# Spacer
sizer.Add (wx.StaticText(self, label=""), flag=wx.LEFT, border=5)
boxsizer = wx.StaticBoxSizer(wx.StaticBox(self, label="My SQL settings"), wx.VERTICAL)
# User
boxsizer.Add( wx.StaticText(self, label="User"), flag=wx.LEFT, border=5 )
user_ctrl = wx.TextCtrl(self, value="fretmeter")
user_ctrl.__label__ = "user"
boxsizer.Add(user_ctrl, flag=wx.EXPAND, border=5)
# Password
boxsizer.Add( wx.StaticText(self, label="\nPassword"), flag=wx.LEFT, border=5 )
password_ctrl = wx.TextCtrl(self, style=wx.TE_PASSWORD)
password_ctrl.__label__ = "password"
boxsizer.Add(password_ctrl, flag=wx.EXPAND, border=5)
# Host
boxsizer.Add( wx.StaticText(self, label="\nHost"), flag=wx.LEFT, border=5 )
host_ctrl = wx.TextCtrl(self, value='localhost')
host_ctrl.__label__ = "host"
boxsizer.Add(host_ctrl, flag=wx.EXPAND, border=5)
# Database
boxsizer.Add( wx.StaticText(self, label="\nDatabase"), flag=wx.LEFT, border=5 )
database_ctrl = wx.TextCtrl(self)
database_ctrl.__label__ = "database"
boxsizer.Add(database_ctrl, flag=wx.EXPAND, border=5)
sizer.Add (boxsizer, flag=wx.EXPAND, border=10)
# Spacer
sizer.Add (wx.StaticText(self, label=""), flag=wx.LEFT, border=5)
# Button to start scanning
start_btn = wx.Button(self, label="Start scanning")
start_btn.Bind(wx.EVT_BUTTON, self.StartScan)
sizer.Add(start_btn, flag=wx.EXPAND, border=10)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__ (self, parent) : HardwareGUIControl.__init__(self, parent) sizer = wx.BoxSizer(wx.VERTICAL) ###################################################################### # List of positions of channels sizer.Add (wx.StaticText(self, label="Channel number with pure samples for learning"), flag=wx.LEFT, border=5) self.chanel_odd_experiment_ctrl = wx.TextCtrl (self, value="", style=wx.TE_MULTILINE|wx.EXPAND) self.chanel_odd_experiment_ctrl.__label__ = "channels" sizer.Add (self.chanel_odd_experiment_ctrl, flag=wx.EXPAND, border=5) # List of filters to be used in the motorized filter wheel sizer.Add (wx.StaticText(self, label="\nOptical filters in motorized wheel"), flag=wx.LEFT, border=5) self.filters_odd_experiment_ctrl = wx.TextCtrl (self, value="", style=wx.TE_MULTILINE|wx.EXPAND) self.filters_odd_experiment_ctrl.__label__ = "filters" sizer.Add (self.filters_odd_experiment_ctrl, flag=wx.EXPAND, border=5) # List of positions of channels_mixtures sizer.Add (wx.StaticText(self, label="\nChannel number to measure concentrations"), flag=wx.LEFT, border=5) self.channel_mixtues_ctrl = wx.TextCtrl (self, value="", style=wx.TE_MULTILINE|wx.EXPAND) self.channel_mixtues_ctrl.__label__ = "channels_mixtures" sizer.Add (self.channel_mixtues_ctrl, flag=wx.EXPAND, border=5) # Spectrum post-processing options sizer.Add ( wx.StaticText(self, label="\nSpectrum post-processing options") ) choices = _SpectrumPostProcess.GetChoices() spectrum_options_ctrl = wx.ComboBox (self, choices=choices, value=choices[0], style=wx.CB_READONLY ) spectrum_options_ctrl.__label__ = "spectrum_postprocess" sizer.Add (spectrum_options_ctrl, flag=wx.EXPAND, border=5) # Separator sizer.Add (wx.StaticText(self), border=5) # Record background signal background_signal_button = wx.Button (self, label="Record background") background_signal_button.Bind ( wx.EVT_BUTTON, self.RecordBackground ) sizer.Add (background_signal_button, flag=wx.EXPAND, border=5) # Number of measurements taken sequentially sizer.Add (wx.StaticText(self, label="\nNumber of sequential measurements"), flag=wx.LEFT, border=5) num_seq_measurments_ctrl = wx.SpinCtrl (self, value="1", min=1) num_seq_measurments_ctrl.__label__ = "num_seq_measurments" sizer.Add (num_seq_measurments_ctrl, flag=wx.EXPAND, border=5) # Record spectra manually manualy_record_spectra_button = wx.Button (self, label="Manually record spectra") manualy_record_spectra_button.Bind( wx.EVT_BUTTON, self.ManualyRecordSpectra) sizer.Add (manualy_record_spectra_button, flag=wx.EXPAND, border=5) # Measure concentration button measure_concentr_button = wx.Button (self) measure_concentr_button._start_label = "Measure concentration" measure_concentr_button._start_method = self.MeasureConcentration measure_concentr_button._stop_label = "STOP measuring concentration" measure_concentr_button._stop_method = self.Stop_MeasureConcentration measure_concentr_button.SetLabel (measure_concentr_button._start_label) measure_concentr_button.Bind (wx.EVT_BUTTON, measure_concentr_button._start_method) sizer.Add(measure_concentr_button, flag=wx.EXPAND, border=5) ###################################################################### self.SetSizer(sizer) ############### GUI is created, now generate settings ###################### self.CreateSettingsDict()
def __init__(self, parent):
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
dw, dh = wx.DisplaySize()
############################################################################
#
# Geometry settings
#
############################################################################
boxsizer = wx.StaticBoxSizer(
wx.StaticBox(self, label="Scanning geometry"), wx.VERTICAL)
# Upper layer of points
boxsizer.Add(wx.StaticText(self, label="Upper layer of points"),
flag=wx.LEFT,
border=5)
self.upper_points_ctrl = wx.TextCtrl(self,
style=wx.TE_MULTILINE,
size=(0.1 * dw, 0.15 * dh))
self.upper_points_ctrl.__label__ = "upper_points"
boxsizer.Add(self.upper_points_ctrl)
# Button to add point to upper layer
add_upper_point_btn = wx.Button(self, label="Add point to upper layer")
add_upper_point_btn.Bind(
wx.EVT_BUTTON,
functools.partial(self.AddPoint,
points_ctrl=self.upper_points_ctrl))
boxsizer.Add(add_upper_point_btn, flag=wx.EXPAND, border=5)
# Lower layer of points
boxsizer.Add(wx.StaticText(self, label="\nLower layer of points"),
flag=wx.LEFT,
border=5)
self.lower_points_ctrl = wx.TextCtrl(self,
style=wx.TE_MULTILINE,
size=(0.1 * dw, 0.15 * dh))
self.lower_points_ctrl.__label__ = "lower_points"
boxsizer.Add(self.lower_points_ctrl)
# Button to add point to lower layer
add_lower_point_btn = wx.Button(self, label="Add point to lower layer")
add_lower_point_btn.Bind(
wx.EVT_BUTTON,
functools.partial(self.AddPoint,
points_ctrl=self.lower_points_ctrl))
boxsizer.Add(add_lower_point_btn, flag=wx.EXPAND, border=5)
# Initialize container for points and corresponding photos
self.points = {}
# Spacer
boxsizer.Add(wx.StaticText(self, label=""), flag=wx.LEFT, border=5)
# Delete all points button
clear_all_points_btn = wx.Button(self, label="Delete all points")
clear_all_points_btn.Bind(wx.EVT_BUTTON, self.ClearAllPoints)
boxsizer.Add(clear_all_points_btn, flag=wx.EXPAND, border=5)
sizer.Add(boxsizer, flag=wx.EXPAND, border=10)
############################################################################
#
# MySQL settings
#
############################################################################
# Spacer
sizer.Add(wx.StaticText(self, label=""), flag=wx.LEFT, border=5)
boxsizer = wx.StaticBoxSizer(
wx.StaticBox(self, label="My SQL settings"), wx.VERTICAL)
# User
boxsizer.Add(wx.StaticText(self, label="User"), flag=wx.LEFT, border=5)
user_ctrl = wx.TextCtrl(self, value="fretmeter")
user_ctrl.__label__ = "user"
boxsizer.Add(user_ctrl, flag=wx.EXPAND, border=5)
# Password
boxsizer.Add(wx.StaticText(self, label="\nPassword"),
flag=wx.LEFT,
border=5)
password_ctrl = wx.TextCtrl(self, style=wx.TE_PASSWORD)
password_ctrl.__label__ = "password"
boxsizer.Add(password_ctrl, flag=wx.EXPAND, border=5)
# Host
boxsizer.Add(wx.StaticText(self, label="\nHost"),
flag=wx.LEFT,
border=5)
host_ctrl = wx.TextCtrl(self, value='localhost')
host_ctrl.__label__ = "host"
boxsizer.Add(host_ctrl, flag=wx.EXPAND, border=5)
# Database
boxsizer.Add(wx.StaticText(self, label="\nDatabase"),
flag=wx.LEFT,
border=5)
database_ctrl = wx.TextCtrl(self)
database_ctrl.__label__ = "database"
boxsizer.Add(database_ctrl, flag=wx.EXPAND, border=5)
sizer.Add(boxsizer, flag=wx.EXPAND, border=10)
# Spacer
sizer.Add(wx.StaticText(self, label=""), flag=wx.LEFT, border=5)
# Button to start scanning
start_btn = wx.Button(self, label="Start scanning")
start_btn.Bind(wx.EVT_BUTTON, self.StartScan)
sizer.Add(start_btn, flag=wx.EXPAND, border=10)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent):
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
######################################################################
# List of positions of channels
sizer.Add(wx.StaticText(
self, label="Channel number with pure samples for learning"),
flag=wx.LEFT,
border=5)
self.chanel_odd_experiment_ctrl = wx.TextCtrl(self,
value="",
style=wx.TE_MULTILINE
| wx.EXPAND)
self.chanel_odd_experiment_ctrl.__label__ = "channels"
sizer.Add(self.chanel_odd_experiment_ctrl, flag=wx.EXPAND, border=5)
# List of filters to be used in the motorized filter wheel
sizer.Add(wx.StaticText(self,
label="\nOptical filters in motorized wheel"),
flag=wx.LEFT,
border=5)
self.filters_odd_experiment_ctrl = wx.TextCtrl(self,
value="",
style=wx.TE_MULTILINE
| wx.EXPAND)
self.filters_odd_experiment_ctrl.__label__ = "filters"
sizer.Add(self.filters_odd_experiment_ctrl, flag=wx.EXPAND, border=5)
# List of positions of channels_mixtures
sizer.Add(wx.StaticText(
self, label="\nChannel number to measure concentrations"),
flag=wx.LEFT,
border=5)
self.channel_mixtues_ctrl = wx.TextCtrl(self,
value="",
style=wx.TE_MULTILINE
| wx.EXPAND)
self.channel_mixtues_ctrl.__label__ = "channels_mixtures"
sizer.Add(self.channel_mixtues_ctrl, flag=wx.EXPAND, border=5)
# Spectrum post-processing options
sizer.Add(
wx.StaticText(self, label="\nSpectrum post-processing options"))
choices = _SpectrumPostProcess.GetChoices()
spectrum_options_ctrl = wx.ComboBox(self,
choices=choices,
value=choices[0],
style=wx.CB_READONLY)
spectrum_options_ctrl.__label__ = "spectrum_postprocess"
sizer.Add(spectrum_options_ctrl, flag=wx.EXPAND, border=5)
# Separator
sizer.Add(wx.StaticText(self), border=5)
# Record background signal
background_signal_button = wx.Button(self, label="Record background")
background_signal_button.Bind(wx.EVT_BUTTON, self.RecordBackground)
sizer.Add(background_signal_button, flag=wx.EXPAND, border=5)
# Number of measurements taken sequentially
sizer.Add(wx.StaticText(self,
label="\nNumber of sequential measurements"),
flag=wx.LEFT,
border=5)
num_seq_measurments_ctrl = wx.SpinCtrl(self, value="1", min=1)
num_seq_measurments_ctrl.__label__ = "num_seq_measurments"
sizer.Add(num_seq_measurments_ctrl, flag=wx.EXPAND, border=5)
# Record spectra manually
manualy_record_spectra_button = wx.Button(
self, label="Manually record spectra")
manualy_record_spectra_button.Bind(wx.EVT_BUTTON,
self.ManualyRecordSpectra)
sizer.Add(manualy_record_spectra_button, flag=wx.EXPAND, border=5)
# Measure concentration button
measure_concentr_button = wx.Button(self)
measure_concentr_button._start_label = "Measure concentration"
measure_concentr_button._start_method = self.MeasureConcentration
measure_concentr_button._stop_label = "STOP measuring concentration"
measure_concentr_button._stop_method = self.Stop_MeasureConcentration
measure_concentr_button.SetLabel(measure_concentr_button._start_label)
measure_concentr_button.Bind(wx.EVT_BUTTON,
measure_concentr_button._start_method)
sizer.Add(measure_concentr_button, flag=wx.EXPAND, border=5)
######################################################################
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__ (self, parent) :
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
# Separator
sizer.Add (wx.StaticText(self), border=5)
# Pulse shaping options
sizer.Add ( wx.StaticText(self, label="Pulse shaping options") )
pulse_shaping_options = {
"amplitude only" :
( 1, lambda ind : ( ind, np.zeros(len(ind)) ) ),
"phase only" :
( 1, lambda ind : ( np.ones(len(ind)), ind ) ),
"amplitude and phase" :
( 2, lambda ind : ( ind[:len(ind)/2], ind[len(ind)/2:] ) )
}
self.Ind_length, self.ind2pulse_shape = zip(*pulse_shaping_options.values())
# Multiplicative factor to determine the number of optimization variables
# controls the size of a single individual, which is equal to ind_len*self.num_pixels
self.Ind_length = dict( zip(pulse_shaping_options.keys(), self.Ind_length) )
# Function converting GA individual to pulse shape
self.ind2pulse_shape = dict( zip(pulse_shaping_options.keys(), self.ind2pulse_shape) )
choices = pulse_shaping_options.keys()
pulse_shaping_ctrl = wx.ComboBox (self, choices=choices, value=choices[0], style=wx.CB_READONLY )
pulse_shaping_ctrl.__label__ = "pulse_shaping_option"
sizer.Add (pulse_shaping_ctrl, flag=wx.EXPAND, border=5)
# Spectrum post-processing options
sizer.Add ( wx.StaticText(self, label="Spectrum post-processing options") )
choices = _SpectrumPostProcess.GetChoices()
spectrum_options_ctrl = wx.ComboBox (self, choices=choices, value=choices[0], style=wx.CB_READONLY )
spectrum_options_ctrl.__label__ = "spectrum_postprocess"
sizer.Add (spectrum_options_ctrl, flag=wx.EXPAND, border=5)
# Separator
#sizer.Add (wx.StaticText(self), border=5)
# Size of pixel bundle
sizer.Add (wx.StaticText(self, label="\nPixels to bundle"), flag=wx.EXPAND, border=5)
pixel_bundle_width = wx.SpinCtrl(self, value="1", min=1, max=640)
pixel_bundle_width.__label__ = "pixel_bundle_width"
sizer.Add (pixel_bundle_width, flag=wx.EXPAND, border=5)
# Population size
sizer.Add (wx.StaticText(self, label="Population size"), flag=wx.LEFT, border=5)
population_size_ctrl = wx.SpinCtrl (self, value="10", min=1, max=100000)
population_size_ctrl.__label__ = "population_size"
sizer.Add (population_size_ctrl , flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
########################################################################
# Setting characterizing mutation
########################################################################
# sizer.Add (wx.StaticText(self, label="Gaussian mutation:"), flag=wx.LEFT, border=5)
sizer.Add (wx.StaticText(self, label="Gaussian mutation:\nMean"), flag=wx.LEFT, border=5)
mu_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.0, digits=3)
mu_ctrl.__label__ = "gaussian_mutation_mu"
sizer.Add (mu_ctrl , flag=wx.EXPAND, border=5)
sizer.Add (wx.StaticText(self, label="Sigma"), flag=wx.LEFT, border=5)
sigma_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.05, digits=3)
sigma_ctrl.__label__ = "gaussian_mutation_sigma"
sizer.Add (sigma_ctrl , flag=wx.EXPAND, border=5)
sizer.Add (wx.StaticText(self, label="Independent probability for attribute mutation"), flag=wx.LEFT, border=5)
indpb_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=1., digits=3)
indpb_ctrl.__label__ = "mutation_indpb"
sizer.Add (indpb_ctrl, flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
# cxpb - The probability of mating two individuals
sizer.Add (wx.StaticText(self, label="Mating probability"), flag=wx.LEFT, border=5)
cxpb_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.5, digits=3)
cxpb_ctrl.__label__ = "cxpb"
sizer.Add (cxpb_ctrl, flag=wx.EXPAND, border=5)
# mutpb - The probability of mutating an individuals
sizer.Add (wx.StaticText(self, label="Mutating probability"), flag=wx.LEFT, border=5)
mutpb_ctrl = wxFloatSpin (self, min_val=0, max_val=1, increment=0.01, value=0.1, digits=3)
mutpb_ctrl.__label__ = "mutpb"
sizer.Add (mutpb_ctrl, flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
# Record background signal
background_signal_button = wx.Button (self, label="Record background")
background_signal_button.Bind ( wx.EVT_BUTTON, self.RecordBackground )
sizer.Add (background_signal_button, flag=wx.EXPAND, border=5)
# Coherently suppress fluorescence button
self.max_shg_button = wx.Button (self)
self.max_shg_button._start_label = "Start GA to maximize SHG"
self.max_shg_button._start_method = partial(self.StartOptimization, DoGA=self.DoSingleIterGA_SHGMaximize)
self.max_shg_button._stop_label = "STOP GA to maximize SHG"
self.max_shg_button.SetLabel (self.max_shg_button._start_label)
self.max_shg_button.Bind( wx.EVT_BUTTON, self.max_shg_button._start_method )
sizer.Add(self.max_shg_button, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__ (self, parent) :
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
sizer.Add (wx.StaticText(self, label="\nMax amplitude (ND filter)"), flag=wx.LEFT, border=5)
max_ampl_ctrl = wxFloatSpin(self, min_val=0, max_val=1, increment=0.01, value=1., digits=3)
max_ampl_ctrl.__label__ = "max_ampl"
sizer.Add (max_ampl_ctrl , flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
################ Parameters of reference mask ####################
sb_sizer = wx.StaticBoxSizer( wx.StaticBox(self, label="Reference mask parameters: "), wx.VERTICAL )
# Min value of coefficient
sb_sizer.Add (wx.StaticText(self, label="min coefficient"), flag=wx.LEFT, border=5)
coeff_min_ctrl = wxFloatSpin (self, min_val=-10, max_val=10, increment=0.01, value=-0.9, digits=3)
coeff_min_ctrl.__label__ = "coeff_min"
sb_sizer.Add (coeff_min_ctrl , flag=wx.EXPAND, border=5)
# Max value of coefficient
sb_sizer.Add (wx.StaticText(self, label="max coefficient"), flag=wx.LEFT, border=5)
coeff_max_ctrl = wxFloatSpin (self, min_val=0, max_val=10, increment=0.01, value=0.9, digits=3)
coeff_max_ctrl.__label__ = "coeff_max"
sb_sizer.Add (coeff_max_ctrl , flag=wx.EXPAND, border=5)
# Number of coeff scans
sb_sizer.Add (wx.StaticText(self, label="number of scans"), flag=wx.LEFT, border=5)
coeff_num_ctrl = wx.SpinCtrl (self, value="20", min=10, max=100000)
coeff_num_ctrl.__label__ = "coeff_num"
sb_sizer.Add (coeff_num_ctrl , flag=wx.EXPAND, border=5)
# Polynomial basis type
sb_sizer.Add (wx.StaticText(self, label="\nPolynomial basis type"), flag=wx.LEFT, border=5)
self.polynomial_bases = {
"Chebyshev" : np.polynomial.chebyshev.Chebyshev,
"Legendre" : np.polynomial.legendre.Legendre,
"Laguerre" : np.polynomial.laguerre.Laguerre,
"Hermite" : np.polynomial.hermite.Hermite,
"Monomials" : np.polynomial.polynomial.Polynomial
}
choices = self.polynomial_bases.keys()
polynomial_bais_ctrl = wx.ComboBox (self, choices=choices, value=choices[0], style=wx.CB_READONLY )
polynomial_bais_ctrl.__label__ = "polynomial_basis"
sb_sizer.Add (polynomial_bais_ctrl, flag=wx.EXPAND, border=5)
# Polynomial order
sb_sizer.Add (wx.StaticText(self, label="\npolynomial order"), flag=wx.LEFT, border=5)
poly_order_ctrl = wx.SpinCtrl (self, value="2", min=0, max=100000)
poly_order_ctrl.__label__ = "polynomial_order"
sb_sizer.Add (poly_order_ctrl , flag=wx.EXPAND, border=5)
sizer.Add (sb_sizer, flag=wx.EXPAND, border=10)
################################################
# Scan button
self.get_coeff_scan_btn = wx.Button (self)
self.get_coeff_scan_btn._start_label = "Scan polynomial coefficient"
self.get_coeff_scan_btn._start_method = self.GetDeltaScan
self.get_coeff_scan_btn._stop_label = "STOP scanning"
self.get_coeff_scan_btn._stop_method = self.StopScannning
self.get_coeff_scan_btn.SetLabel( self.get_coeff_scan_btn._start_label )
self.get_coeff_scan_btn.Bind( wx.EVT_BUTTON, self.get_coeff_scan_btn._start_method )
sizer.Add (self.get_coeff_scan_btn, flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
# Select current value of coefficient
sizer.Add (wx.StaticText(self, label="Value of current coefficient"), flag=wx.LEFT, border=5)
self.current_coeff_val = wxFloatSpin (self, min_val=-10, max_val=10, increment=0.01, value=0., digits=3)
self.current_coeff_val.__label__ = "current_coeff_val"
sizer.Add (self.current_coeff_val , flag=wx.EXPAND, border=5)
# Button to add the correction
correct_phase = wx.Button (self, label="Add correction")
correct_phase.Bind( wx.EVT_BUTTON, self.AddCurrentCorrection )
sizer.Add (correct_phase, flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
# Buttons to save correcting procedure
save_correction_log = wx.Button (self, label="Save correction log")
save_correction_log.Bind( wx.EVT_BUTTON, self.SaveCorrectionLog )
sizer.Add (save_correction_log, flag=wx.EXPAND, border=5)
# Buttons to plot reference phase
plot_reference_phase = wx.Button (self, label="Plot reference phase")
plot_reference_phase.Bind( wx.EVT_BUTTON, self.PlotReferencePhase )
sizer.Add (plot_reference_phase, flag=wx.EXPAND, border=5)
# Buttons to copy reference phase to clipboard
reference_phase2clipboard = wx.Button (self, label="Copy reference phase to clipboard")
reference_phase2clipboard.Bind( wx.EVT_BUTTON, self.ReferencePhase2Clipboard )
sizer.Add (reference_phase2clipboard, flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
# Clear all button
clear_all = wx.Button (self, label="Clear all")
clear_all.Bind( wx.EVT_BUTTON, self.ClearAllData )
sizer.Add (clear_all, flag=wx.EXPAND, border=5)
# Clear all info
self.ClearAllData (None)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent, dev) :
HardwareGUIControl.__init__(self, parent, dev)
sizer = wx.BoxSizer(wx.VERTICAL)
################################################
sizer.Add (wx.StaticText(self, label="Exposure time (millisecond)"), flag=wx.LEFT, border=5)
exposure_time_ctr = wx.SpinCtrl (self, value="20", min=1, max=1e6)
exposure_time_ctr.SetLabel("Exposure time")
sizer.Add (exposure_time_ctr, flag=wx.EXPAND, border=5)
################################################
sizer.Add (wx.StaticText(self, label="Scans to average"), flag=wx.LEFT, border=5)
scans_average_ctr = wx.SpinCtrl (self, value="1", min=1, max=1e6)
scans_average_ctr.SetLabel("scans_average")
sizer.Add (scans_average_ctr, flag=wx.EXPAND, border=5)
################################################
sizer.Add (wx.StaticText(self, label="\nStart wavelength (nm)"), flag=wx.LEFT, border=5)
start_wavelength_ctr = wx.SpinCtrl (self, value="196", min=1, max=1e6)
#start_wavelength_ctr = wx.SpinCtrl (self, value="580", min=1, max=1e6)
start_wavelength_ctr.SetLabel("start_wavelength")
sizer.Add (start_wavelength_ctr, flag=wx.EXPAND, border=5)
################################################
sizer.Add (wx.StaticText(self, label="End wavelength (nm)"), flag=wx.LEFT, border=5)
end_wavelength_ctr = wx.SpinCtrl (self, value="1118", min=1, max=1e6)
#end_wavelength_ctr = wx.SpinCtrl (self, value="680", min=1, max=1e6)
end_wavelength_ctr.SetLabel("end_wavelength")
sizer.Add (end_wavelength_ctr, flag=wx.EXPAND, border=5)
############ Parameters for displaying spectrum #############
# Spacer
sizer.Add (wx.StaticText(self), flag=wx.LEFT, border=5)
sb_sizer = wx.StaticBoxSizer( wx.StaticBox(self, label="Plotting options"), wx.VERTICAL )
fix_vert_ax_ctrl = wx.CheckBox(self, label="Fix vertical axis")
fix_vert_ax_ctrl.__label__ = "fix_vertical_axis"
sb_sizer.Add (fix_vert_ax_ctrl, flag=wx.EXPAND, border=5)
sb_sizer.Add (wx.StaticText(self, label="max val"), flag=wx.LEFT, border=5)
max_val_ctr = wx.SpinCtrl (self, value="50000", min=1, max=1e6)
max_val_ctr.SetLabel("vertical_axis_max_val")
sb_sizer.Add (max_val_ctr, flag=wx.EXPAND, border=5)
sb_sizer.Add (wx.StaticText(self, label="min val"), flag=wx.LEFT, border=5)
min_val_ctr = wx.SpinCtrl (self, value="100", min=1, max=1e6)
min_val_ctr.SetLabel("vertical_axis_min_val")
sb_sizer.Add (min_val_ctr, flag=wx.EXPAND, border=5)
sizer.Add (sb_sizer, flag=wx.EXPAND, border=5)
################################################
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent):
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
sizer.Add(wx.StaticText(self, label="\nMax amplitude (ND filter)"),
flag=wx.LEFT,
border=5)
max_ampl_ctrl = wxFloatSpin(self,
min_val=0,
max_val=1,
increment=0.01,
value=1.,
digits=3)
max_ampl_ctrl.__label__ = "max_ampl"
sizer.Add(max_ampl_ctrl, flag=wx.EXPAND, border=5)
# Separator
sizer.Add(wx.StaticText(self), border=5)
################ Parameters of reference mask ####################
sb_sizer = wx.StaticBoxSizer(
wx.StaticBox(self, label="Reference mask parameters: "),
wx.VERTICAL)
# Min value of coefficient
sb_sizer.Add(wx.StaticText(self, label="min coefficient"),
flag=wx.LEFT,
border=5)
coeff_min_ctrl = wxFloatSpin(self,
min_val=-10,
max_val=10,
increment=0.01,
value=-0.9,
digits=3)
coeff_min_ctrl.__label__ = "coeff_min"
sb_sizer.Add(coeff_min_ctrl, flag=wx.EXPAND, border=5)
# Max value of coefficient
sb_sizer.Add(wx.StaticText(self, label="max coefficient"),
flag=wx.LEFT,
border=5)
coeff_max_ctrl = wxFloatSpin(self,
min_val=0,
max_val=10,
increment=0.01,
value=0.9,
digits=3)
coeff_max_ctrl.__label__ = "coeff_max"
sb_sizer.Add(coeff_max_ctrl, flag=wx.EXPAND, border=5)
# Number of coeff scans
sb_sizer.Add(wx.StaticText(self, label="number of scans"),
flag=wx.LEFT,
border=5)
coeff_num_ctrl = wx.SpinCtrl(self, value="20", min=10, max=100000)
coeff_num_ctrl.__label__ = "coeff_num"
sb_sizer.Add(coeff_num_ctrl, flag=wx.EXPAND, border=5)
# Polynomial basis type
sb_sizer.Add(wx.StaticText(self, label="\nPolynomial basis type"),
flag=wx.LEFT,
border=5)
self.polynomial_bases = {
"Chebyshev": np.polynomial.chebyshev.Chebyshev,
"Legendre": np.polynomial.legendre.Legendre,
"Laguerre": np.polynomial.laguerre.Laguerre,
"Hermite": np.polynomial.hermite.Hermite,
"Monomials": np.polynomial.polynomial.Polynomial
}
choices = self.polynomial_bases.keys()
polynomial_bais_ctrl = wx.ComboBox(self,
choices=choices,
value=choices[0],
style=wx.CB_READONLY)
polynomial_bais_ctrl.__label__ = "polynomial_basis"
sb_sizer.Add(polynomial_bais_ctrl, flag=wx.EXPAND, border=5)
# Polynomial order
sb_sizer.Add(wx.StaticText(self, label="\npolynomial order"),
flag=wx.LEFT,
border=5)
poly_order_ctrl = wx.SpinCtrl(self, value="2", min=0, max=100000)
poly_order_ctrl.__label__ = "polynomial_order"
sb_sizer.Add(poly_order_ctrl, flag=wx.EXPAND, border=5)
sizer.Add(sb_sizer, flag=wx.EXPAND, border=10)
################################################
# Scan button
self.get_coeff_scan_btn = wx.Button(self)
self.get_coeff_scan_btn._start_label = "Scan polynomial coefficient"
self.get_coeff_scan_btn._start_method = self.GetDeltaScan
self.get_coeff_scan_btn._stop_label = "STOP scanning"
self.get_coeff_scan_btn._stop_method = self.StopScannning
self.get_coeff_scan_btn.SetLabel(self.get_coeff_scan_btn._start_label)
self.get_coeff_scan_btn.Bind(wx.EVT_BUTTON,
self.get_coeff_scan_btn._start_method)
sizer.Add(self.get_coeff_scan_btn, flag=wx.EXPAND, border=5)
# Separator
sizer.Add(wx.StaticText(self), border=5)
# Select current value of coefficient
sizer.Add(wx.StaticText(self, label="Value of current coefficient"),
flag=wx.LEFT,
border=5)
self.current_coeff_val = wxFloatSpin(self,
min_val=-10,
max_val=10,
increment=0.01,
value=0.,
digits=3)
self.current_coeff_val.__label__ = "current_coeff_val"
sizer.Add(self.current_coeff_val, flag=wx.EXPAND, border=5)
# Button to add the correction
correct_phase = wx.Button(self, label="Add correction")
correct_phase.Bind(wx.EVT_BUTTON, self.AddCurrentCorrection)
sizer.Add(correct_phase, flag=wx.EXPAND, border=5)
# Separator
sizer.Add(wx.StaticText(self), border=5)
# Buttons to save correcting procedure
save_correction_log = wx.Button(self, label="Save correction log")
save_correction_log.Bind(wx.EVT_BUTTON, self.SaveCorrectionLog)
sizer.Add(save_correction_log, flag=wx.EXPAND, border=5)
# Buttons to plot reference phase
plot_reference_phase = wx.Button(self, label="Plot reference phase")
plot_reference_phase.Bind(wx.EVT_BUTTON, self.PlotReferencePhase)
sizer.Add(plot_reference_phase, flag=wx.EXPAND, border=5)
# Buttons to copy reference phase to clipboard
reference_phase2clipboard = wx.Button(
self, label="Copy reference phase to clipboard")
reference_phase2clipboard.Bind(wx.EVT_BUTTON,
self.ReferencePhase2Clipboard)
sizer.Add(reference_phase2clipboard, flag=wx.EXPAND, border=5)
# Separator
sizer.Add(wx.StaticText(self), border=5)
# Clear all button
clear_all = wx.Button(self, label="Clear all")
clear_all.Bind(wx.EVT_BUTTON, self.ClearAllData)
sizer.Add(clear_all, flag=wx.EXPAND, border=5)
# Clear all info
self.ClearAllData(None)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__ (self, parent) :
HardwareGUIControl.__init__(self, parent)
sizer = wx.BoxSizer(wx.VERTICAL)
# List of positions of channels
sizer.Add (wx.StaticText(self, label="Channel number with pure samples for learning"), flag=wx.LEFT, border=5)
self.chanel_odd_experiment_ctrl = wx.TextCtrl (self, value="", style=wx.TE_MULTILINE|wx.EXPAND)
self.chanel_odd_experiment_ctrl.__label__ = "channels"
sizer.Add (self.chanel_odd_experiment_ctrl, flag=wx.EXPAND, border=5)
sizer.Add (wx.StaticText(self, label="\nMax amplitude (ND filter)"), flag=wx.LEFT, border=5)
max_ampl_ctrl = wxFloatSpin(self, min_val=0, max_val=1, increment=0.01, value=1., digits=3)
max_ampl_ctrl.__label__ = "max_ampl"
sizer.Add (max_ampl_ctrl , flag=wx.EXPAND, border=5)
################ Parameters of reference mask ####################
sb_sizer = wx.StaticBoxSizer( wx.StaticBox(self, label="Reference mask parameters: "), wx.VERTICAL )
# Min value of coefficient
sb_sizer.Add (wx.StaticText(self, label="min coefficient"), flag=wx.LEFT, border=5)
coeff_min_ctrl = wxFloatSpin (self, min_val=-10, max_val=10, increment=0.01, value=-0.9, digits=3)
coeff_min_ctrl.__label__ = "coeff_min"
sb_sizer.Add (coeff_min_ctrl , flag=wx.EXPAND, border=5)
# Max value of coefficient
sb_sizer.Add (wx.StaticText(self, label="max coefficient"), flag=wx.LEFT, border=5)
coeff_max_ctrl = wxFloatSpin (self, min_val=0, max_val=10, increment=0.01, value=0.9, digits=3)
coeff_max_ctrl.__label__ = "coeff_max"
sb_sizer.Add (coeff_max_ctrl , flag=wx.EXPAND, border=5)
# Number of coeff scans
sb_sizer.Add (wx.StaticText(self, label="number of scans"), flag=wx.LEFT, border=5)
coeff_num_ctrl = wx.SpinCtrl (self, value="20", min=10, max=100000)
coeff_num_ctrl.__label__ = "coeff_num"
sb_sizer.Add (coeff_num_ctrl , flag=wx.EXPAND, border=5)
# Polynomial basis type
sb_sizer.Add (wx.StaticText(self, label="\nPolynomial basis type"), flag=wx.LEFT, border=5)
self.polynomial_bases = {
"Chebyshev" : np.polynomial.chebyshev.Chebyshev,
"Legendre" : np.polynomial.legendre.Legendre,
"Laguerre" : np.polynomial.laguerre.Laguerre,
"Hermite" : np.polynomial.hermite.Hermite,
"Monomials" : np.polynomial.polynomial.Polynomial
}
choices = self.polynomial_bases.keys()
polynomial_bais_ctrl = wx.ComboBox (self, choices=choices, value=choices[0], style=wx.CB_READONLY )
polynomial_bais_ctrl.__label__ = "polynomial_basis"
sb_sizer.Add (polynomial_bais_ctrl, flag=wx.EXPAND, border=5)
# Polynomial order
sb_sizer.Add (wx.StaticText(self, label="\npolynomial order"), flag=wx.LEFT, border=5)
poly_order_ctrl = wx.SpinCtrl (self, value="2", min=0, max=100000)
poly_order_ctrl.__label__ = "polynomial_order"
sb_sizer.Add (poly_order_ctrl , flag=wx.EXPAND, border=5)
sizer.Add (sb_sizer, flag=wx.EXPAND, border=10)
################################################
# Scan button
self.get_coeff_scan_btn = wx.Button (self)
self.get_coeff_scan_btn._start_label = "Scan polynomial coefficient"
self.get_coeff_scan_btn._start_method = self.DoScannning
self.get_coeff_scan_btn._stop_label = "STOP scanning"
self.get_coeff_scan_btn._stop_method = self.StopScannning
self.get_coeff_scan_btn.SetLabel( self.get_coeff_scan_btn._start_label )
self.get_coeff_scan_btn.Bind( wx.EVT_BUTTON, self.get_coeff_scan_btn._start_method )
sizer.Add (self.get_coeff_scan_btn, flag=wx.EXPAND, border=5)
# Separator
sizer.Add (wx.StaticText(self), border=5)
# Record background signal
background_signal_button = wx.Button (self, label="Record background")
background_signal_button.Bind ( wx.EVT_BUTTON, self.RecordBackground )
sizer.Add (background_signal_button, flag=wx.EXPAND, border=5)
self.SetSizer(sizer)
############### GUI is created, now generate settings ######################
self.CreateSettingsDict()
def __init__(self, parent, **kwards) : HardwareGUIControl.__init__(self, parent, manager_cls=ManagerPicoHarp, **kwards) sizer = wx.BoxSizer(wx.VERTICAL) # Offset sizer.Add (wx.StaticText(self, label="Offset (ns)"), flag=wx.LEFT|wx.TOP, border=5) offset_ctrl = wx.SpinCtrl (self, value="0", min=0, max=1e6) offset_ctrl.__label__ = "offset" sizer.Add (offset_ctrl, flag=wx.EXPAND, border=5) # Enable interactive update offset_ctrl.Bind (wx.EVT_SPINCTRL, functools.partial(self.UpdateProperty, offset_ctrl, "UpdateOffset") ) # Zero level of channel 0 sizer.Add (wx.StaticText(self, label="\nCFDZeroX0 (mV)"), flag=wx.LEFT, border=5) CFDZeroX0_ctrl = wx.SpinCtrl (self, value="10", min=0, max=1e3) CFDZeroX0_ctrl.__label__ = "cfdzerox0" sizer.Add (CFDZeroX0_ctrl, flag=wx.EXPAND, border=5) # Enable interactive update CFDZeroX0_ctrl.Bind (wx.EVT_SPINCTRL, functools.partial(self.UpdateProperty, CFDZeroX0_ctrl, "UpdateCFDZero0") ) # One level for channel 0 sizer.Add (wx.StaticText(self, label="CFDLevel0 (mV)"), flag=wx.LEFT, border=5) CFDLevel0_ctrl = wx.SpinCtrl (self, value="80", min=0, max=1e3) CFDLevel0_ctrl.__label__ = "cfdlevelx0" sizer.Add (CFDLevel0_ctrl, flag=wx.EXPAND, border=5) # Enable interactive update CFDLevel0_ctrl.Bind (wx.EVT_SPINCTRL, functools.partial(self.UpdateProperty, CFDLevel0_ctrl, "UpdateCFDLevel0") ) # Zero level of channel 1 sizer.Add (wx.StaticText(self, label="\nCFDZeroX1 (mV)"), flag=wx.LEFT, border=5) CFDZeroX1_ctrl = wx.SpinCtrl (self, value="10", min=0, max=1e3) CFDZeroX1_ctrl.__label__ = "cfdzerox1" sizer.Add (CFDZeroX1_ctrl, flag=wx.EXPAND, border=5) # Enable interactive update CFDZeroX1_ctrl.Bind (wx.EVT_SPINCTRL, functools.partial(self.UpdateProperty, CFDZeroX1_ctrl, "UpdateCFDZero1") ) # One level for channel 1 sizer.Add (wx.StaticText(self, label="CFDLevel1 (mV)"), flag=wx.LEFT, border=5) CFDLevel1_ctrl = wx.SpinCtrl (self, value="80", min=0, max=1e3) CFDLevel1_ctrl.__label__ = "cfdlevelx1" sizer.Add (CFDLevel1_ctrl, flag=wx.EXPAND, border=5) # Enable interactive update CFDLevel1_ctrl.Bind (wx.EVT_SPINCTRL, functools.partial(self.UpdateProperty, CFDLevel1_ctrl, "UpdateCFDLevel1") ) # Divider sizer.Add (wx.StaticText(self, label="\nDivider"), flag=wx.LEFT, border=5) syncdiv_ctrl = wx.SpinCtrl (self, value="8", min=1, max=1e3) syncdiv_ctrl.__label__ = "syncdiv" sizer.Add (syncdiv_ctrl, flag=wx.EXPAND, border=5) # Enable interactive update syncdiv_ctrl.Bind (wx.EVT_SPINCTRL, functools.partial(self.UpdateProperty, syncdiv_ctrl, "UpdateSyncDiv") ) # Range sizer.Add (wx.StaticText(self, label="\nRange"), flag=wx.LEFT, border=5) range_ctrl = wx.SpinCtrl (self, value="2", min=0, max=1e6) range_ctrl.__label__ = "range" sizer.Add (range_ctrl, flag=wx.EXPAND, border=5) # Enable interactive update range_ctrl.Bind (wx.EVT_SPINCTRL, functools.partial(self.UpdateProperty, range_ctrl, "UpdateRange") ) # Acquisition time sizer.Add (wx.StaticText(self, label="\nAcquisition time (ms)"), flag=wx.LEFT, border=5) tacq_ctrl = wx.SpinCtrl (self, value="1000", min=100, max=1e6) tacq_ctrl.__label__ = "tacq" sizer.Add (tacq_ctrl, flag=wx.EXPAND, border=5) # Enable interactive update tacq_ctrl.Bind (wx.EVT_SPINCTRL, functools.partial(self.UpdateProperty, tacq_ctrl, "UpdateTacq") ) # Spacer sizer.Add (wx.StaticText(self, label=""), flag=wx.LEFT, border=5) # Button for displaying histogram show_histogram_button = MultiStateButton(self, states=[ (self.StartShowingHistogram, "Show histogram"), (self.StopShowingHistogram, "STOP histogram") ] ) sizer.Add (show_histogram_button, flag=wx.EXPAND, border=5) self.SetSizer(sizer) ############### GUI is created, now generate settings ###################### self.CreateSettingsDict()