def validate_params(params, callback=None):
if (params.model_file_name is None):
raise Sorry("No PDB file(s) specified.")
elif (params.output.file_name is not None):
if (os.path.isdir(params.output.file_name)):
raise Sorry("The specified output file is a currently existing " +
"directory.")
check_if_output_directory_exists(params.output.file_name)
return True
def exercise_dir_utils():
dirs = ["tst_utils_1", "tst_utils_2", "tst_utils_45"]
for dir_name in dirs :
if (os.path.isdir(dir_name)) : os.rmdir(dir_name)
dir_name = utils.create_run_directory("tst_utils")
assert (os.path.basename(dir_name) == "tst_utils_1")
dir_name = utils.create_run_directory("tst_utils")
assert (os.path.basename(dir_name) == "tst_utils_2")
dir_name = utils.create_run_directory("tst_utils", 45)
assert (os.path.basename(dir_name) == "tst_utils_45")
for dir_name in dirs :
os.rmdir(dir_name)
file_name = "/cctbx/%s/%s/XXXX.pdb" % (random.random(), random.random())
try :
utils.check_if_output_directory_exists(file_name)
except utils.Sorry :
pass
else :
raise Exception_expected
dir_name = os.getcwd()
utils.check_if_output_directory_exists(dir_name=dir_name)
dir_created = False
if (not os.path.exists("Dropbox")):
os.mkdir("Dropbox")
dir_created = True
dir_name = os.path.join(os.getcwd(), "Dropbox")
with warnings.catch_warnings(record=True) as w:
warnings.simplefilter("always")
utils.check_if_output_directory_exists(dir_name=dir_name)
assert len(w) == 1
assert "Dropbox directory" in str(w[-1].message)
if (dir_created):
os.rmdir("Dropbox")
host_info = utils.host_and_user()
assert not utils.allow_delete_directory(host_info.homedir)
target_dir = os.path.join(host_info.homedir, "Downloads")
assert not utils.allow_delete_directory(target_dir)
target_dir = os.path.join(host_info.homedir, "data", "lysozyme")
assert utils.allow_delete_directory(target_dir)
def exercise_dir_utils () :
dirs = ["tst_utils_1", "tst_utils_2", "tst_utils_45"]
for dir_name in dirs :
if (os.path.isdir(dir_name)) : os.rmdir(dir_name)
dir_name = utils.create_run_directory("tst_utils")
assert (os.path.basename(dir_name) == "tst_utils_1")
dir_name = utils.create_run_directory("tst_utils")
assert (os.path.basename(dir_name) == "tst_utils_2")
dir_name = utils.create_run_directory("tst_utils", 45)
assert (os.path.basename(dir_name) == "tst_utils_45")
for dir_name in dirs :
os.rmdir(dir_name)
file_name = "/cctbx/%s/%s/XXXX.pdb" % (random.random(), random.random())
try :
utils.check_if_output_directory_exists(file_name)
except utils.Sorry :
pass
else :
raise Exception_expected
dir_name = os.getcwd()
utils.check_if_output_directory_exists(dir_name=dir_name)
dir_created = False
if (not os.path.exists("Dropbox")) :
os.mkdir("Dropbox")
dir_created = True
dir_name = os.path.join(os.getcwd(), "Dropbox")
with warnings.catch_warnings(record=True) as w:
warnings.simplefilter("always")
utils.check_if_output_directory_exists(dir_name=dir_name)
assert len(w) == 1
assert "Dropbox directory" in str(w[-1].message)
if (dir_created) :
os.rmdir("Dropbox")
host_info = utils.host_and_user()
assert not utils.allow_delete_directory(host_info.homedir)
target_dir = os.path.join(host_info.homedir, "Downloads")
assert not utils.allow_delete_directory(target_dir)
target_dir = os.path.join(host_info.homedir, "data", "lysozyme")
assert utils.allow_delete_directory(target_dir)