async def get_targetpixelfile(self, mission, target, sector=None, campaign=None, quarter=None, aperture_mask="ALL"):
result = None
if mission == "TESS":
result = search_targetpixelfile(mission=mission, target=target,sector=sector)
elif mission == "Kepler":
result = search_targetpixelfile(mission=mission, target=target, quarter=quarter)
elif mission == "K2":
result = search_targetpixelfile(mission=mission, target=target, campaign=campaign)
else:
raise ValueError("Unknown mission, must be TESS, Kepler, or K2")
return result.download()
def FoldTarget(target, targetquarter, targetexp, targetperiod):
pixelfile = search_targetpixelfile(target, quarter=targetquarter, exptime=targetexp).download();
#print("\nDownloaded")
pixelfile.plot(frame=1);
lc = pixelfile.to_lightcurve(aperture_mask=pixelfile.pipeline_mask);
#plt.title("Scatter Plot");
lc.scatter();
lc.plot();
plt.title("Light Curve")
#print("\nMask Done!")
"""lc = pixelfile.to_lightcurve(aperture_mask='all');
lc.plot();
print("\nAll Done!")"""
flat_lc = lc.flatten(window_length=401);
flat_lc.plot();
plt.title("Flat")
#print("\nFlat Done!")
folded_lc = flat_lc.fold(period=targetperiod);
folded_lc.plot();
plt.title("Folded")
#print("\nFold Done!")
binned_lc = folded_lc.bin(time_bin_size=0.01);
binned_lc.plot();
plt.title("Binned")
def _from_mast_K2(targetid,
mode,
c,
flux_type="PDCSAP_FLUX",
cadence="long",
aperture_mask="default",
download_dir=None):
if mode == "TPF":
tpffilelist = search_targetpixelfile(targetid,
mission="K2",
campaign=c,
cadence=cadence)
tpf = tpffilelist.download(download_dir=download_dir)
if aperture_mask == "default":
aperture_mask = tpf.pipeline_mask
lc = tpf.to_lightcurve(aperture_mask=aperture_mask)
flc = _convert_TPF_to_FLC(tpf, lc)
return flc
elif mode == "LC":
flcfilelist = search_lightcurvefile(targetid,
mission="K2",
campaign=c,
cadence=cadence)
flcfile = flcfilelist.download(download_dir=download_dir)
lc = flcfile.get_lightcurve(flux_type)
flc = _convert_LC_to_FLC(lc, origin="KLC")
return flc
def download_k2_tpf(star='WASP-47', **kw):
'''
This function is a wrapper a "Target Pixel Files" (TPF) for Kepler/K2 data.
Each TPF is basically a movie; it contains a time series of images in a tiny
little area around a particular Kepler/K2 target.
This has been tested only on data from the main Kepler mission and K2.
Parameters
----------
star: str, int
The name of the star whose light curve you want to download.
This can be a name ("K2-18", "TRAPPIST-1") or an EPIC number
(246199087).
Returns
-------
tpf: KeplerTargetPixelFile object
This is a `lightkurve`-style TargetPixelFile object, which contains
the attributes `tpf.time` (times in JD) and `tpf.flux` (the brightness
of each pixel as a function of time), as well as lots of methods for
analysis and plotting.
'''
# download a KeplerLightCurveFile from the MAST archive
tpf = search_targetpixelfile(star, **kw).download()
return tpf
def data_K2(fitspath):
targetname = fitspath[43:]
targetname = targetname[:-18]
print('TARGET ' + str(targetname))
campaign_no = 18
try:
tpf = lk.search_targetpixelfile(str(targetname), campaign=18).download()
except IOError:
return 0, 0, 0, 0
lc = tpf.to_lightcurve().normalize().flatten()
time = lc.time
flux = lc.flux
flux_count = len(flux)
sumflux = sum(flux)
flux_avg = sumflux/flux_count
flux = [i/flux_avg for i in flux]
#normalize to 0.0
flux = [i-1 for i in flux]
flux = np.asarray(flux)
time = np.asarray(time)
#SIGMA CLIPPING
flux = sigma_clip(flux, sigma=3, iters=1)
flux = flux.filled(fill_value=0)
return time, flux, targetname, campaign_no
def test_pld_corrector():
# download tpf data for a target
k2_target = "EPIC247887989"
k2_tpf = search_targetpixelfile(k2_target).download()
# instantiate PLD corrector object
pld = PLDCorrector(k2_tpf[:500], aperture_mask="threshold")
# produce a PLD-corrected light curve with a default aperture mask
corrected_lc = pld.correct()
# ensure the CDPP was reduced by the corrector
pld_cdpp = corrected_lc.estimate_cdpp()
raw_cdpp = k2_tpf.to_lightcurve().estimate_cdpp()
assert pld_cdpp < raw_cdpp
# make sure the returned object is the correct type (`KeplerLightCurve`)
assert isinstance(corrected_lc, KeplerLightCurve)
# try detrending using a threshold mask
corrected_lc = pld.correct()
# reduce using fewer principle components
corrected_lc = pld.correct(pca_components=20)
# try PLD on a TESS observation
from lightkurve import TessTargetPixelFile
from ..test_targetpixelfile import TESS_SIM
tess_tpf = TessTargetPixelFile(TESS_SIM)
# instantiate PLD corrector object
pld = PLDCorrector(tess_tpf[:500], aperture_mask="pipeline")
# produce a PLD-corrected light curve with a pipeline aperture mask
raw_lc = tess_tpf.to_lightcurve(aperture_mask="pipeline")
corrected_lc = pld.correct(pca_components=20)
# the corrected light curve should have higher precision
assert corrected_lc.estimate_cdpp() < raw_lc.estimate_cdpp()
# make sure the returned object is the correct type (`TessLightCurve`)
assert isinstance(corrected_lc, TessLightCurve)
def _from_mast_K2(targetid,
mode,
c,
flux_type="PDCSAP_FLUX",
cadence="long",
aperture_mask="default",
download_dir=None):
mission = "K2"
if mode == "TPF":
tpffilelist = search_targetpixelfile(targetid,
mission=mission,
campaign=c,
cadence=cadence)
tpf = tpffilelist.download(download_dir=download_dir)
if aperture_mask == "default":
aperture_mask = tpf.pipeline_mask
lc = tpf.to_lightcurve(aperture_mask=aperture_mask)
flc = _convert_TPF_to_FLC(tpf, lc)
return flc
elif mode == "LC":
flcfilelist = search_lightcurve(targetid,
mission=mission,
campaign=c,
cadence=cadence,
author="K2")
return _handle_missions(flcfilelist, mission, flux_type, cadence,
download_dir, targetid, c)
def download_all_short_cadence_observations_for_targets_in_flare_catalog():
"""Downloads and saves all the short cadence observations for the stars which appear in the flare catalog."""
flare_catalog = np.genfromtxt(catalog_path, delimiter=',', skip_header=1)
kepler_input_catalog_numbers = list(
map(int, [target[0] for target in flare_catalog]))
observations_skipped = 0
targets_skipped = 0
for kepler_input_catalog_number in kepler_input_catalog_numbers:
with warnings.catch_warnings():
warnings.filterwarnings("ignore", category=LightkurveWarning
) # Ignore warnings about empty downloads.
current_target_skipped = False
short_cadence_observations = search_targetpixelfile(
kepler_input_catalog_number, cadence='short')
for observation_index, observation in enumerate(
short_cadence_observations):
observation_file_name = f'{kepler_input_catalog_number}_{observation_index}.fits'
try:
observation.download().to_fits(os.path.join(
data_directory, observation_file_name),
overwrite=True)
except OSError:
observations_skipped += 1
if not current_target_skipped:
current_target_skipped = True
targets_skipped += 1
print(f'{targets_skipped} targets skipped.')
print(f'{observations_skipped} observations skipped.')
def tpf_grabber(tic_id, sectors):
'''Authors:
Patrick Tamburo, Boston University, July 2020
Purpose:
Given a target's position when it was observed with TESS, returns the column and row of the pixel that the target fell on.
Inputs:
tic_id (str): The target's TIC ID (e.g., 'TIC 326109505')
sector (array of ints): Sectors during which the target was observed
Outputs:
tpfs (list): List of target pixel files.
TODO:
'''
tpfs = []
for i in range(len(sectors)):
tpf = lk.search_targetpixelfile(tic_id, sector=sectors[i]).download()
if tpf is not None:
tpfs.append(tpf)
else:
#Sometimes, tpf files don't exist for certain sectors, even though the target may have been observed in them...don't know why.
#But if that is the case, just skip that sector.
print('ERROR: no data found for {} in sector {:2d}, skipping.'.
format(tic_id, sectors[i]))
continue
return tpfs
def find_campaigns(s):
'''Find campaigns and EPIC IDs
for a given RA and Dec pair
using lightkurve query function.
Parameters:
------------
s : str
"RA Dec" in deg
Return:
-------
list, int : list of campaigns, EPIC ID
'''
res = search_targetpixelfile(s, radius=2)
pdf = res.table.to_pandas()
if pdf.shape[0] > 0:
pdf['Campaign'] = pdf.obs_id.str[-5:-3].astype(int)
pdf['EPIC'] = pdf.target_name.str[4:]
try:
assert (pdf.EPIC.values == pdf.EPIC.iloc[0]).all()
except:
print("Something went wrong here\n")
print(pdf.EPIC.values)
return [np.nan], np.nan
return pdf.Campaign.tolist(), pdf.EPIC.iloc[0]
else:
return [np.nan], np.nan
def xmkpy3_plot_add_compass_rose_v5():
import matplotlib.pyplot as plt
import lightkurve as lk
#
obj = 3 # USER CUSTOMIZE
#
tpf = None
if (obj == 1):
north_arm_arcsec = 8
tpf = lk.search_targetpixelfile(
target='Kepler-138b', mission='Kepler', quarter=10)\
.download(quality_bitmask=0)
# ^--- Exoplanet Kelper-138b is "KIC 7603200"
elif (obj == 2):
north_arm_arcsec = 42
search_results = lk.search_tesscut(target='CD Ind', sector=1)
tpf = search_results[0].download(cutout_size=(11, 11),
quality_bitmask=0)
elif (obj == 3):
north_arm_arcsec = 42
tpf = lk.search_targetpixelfile(target='CD Ind',
mission='TESS',
sector=1).download(quality_bitmask=0)
else:
print('***ERROR*** BAD OBJECT NUMBER:', obj)
# pass:if
assert (tpf is not None)
#
# Plot the 2nd frame of the TPF
ax = tpf.plot(frame=1, cmap='gray_r')
#
# add a compass rose using the WCS from the TargetPixelFile
mkpy3_plot_add_compass_rose_v5(ax=ax,
wcs=tpf.wcs,
north_arm_arcsec=north_arm_arcsec,
verbose=True)
#
print(tpf.path, '\n^--- tpf.path\n')
print(tpf.ra, '=tpf.ra')
print(tpf.dec, '=tpf.dec')
print(obj, '=obj')
#
plot_file = 'mkpy3_plot1.png'
plt.savefig(plot_file, bbox_inches="tight")
plt.close()
print('\n', plot_file, ' <--- new PNG file written')
def makeLCQ(ID, q):
"""
Generates a Kepler lightcurve file for a given target ID and quarter.
1 <= q <= 17
"""
tpf = lk.search_targetpixelfile(ID, quarter=q).download()
lightcurve = tpf.to_lightcurve()
lightcurve = remove_anomalies(lightcurve)
return lightcurve
def FlatTarget(target, targetquarter, targetexp):
pixelfile = search_targetpixelfile(target, quarter=targetquarter, exptime=targetexp).download();
lc = pixelfile.to_lightcurve(aperture_mask=pixelfile.pipeline_mask);
lc.scatter();
flat_lc = lc.flatten(window_length=401);
flat_lc.plot();
plt.title("Flat")
def test_FPs():
"""Produce some figures that show centroid offsets"""
names = [
"KIC 5391911",
"KIC 5866724",
"EPIC 220256496",
"EPIC 210957318",
"TIC 293435336",
"TIC 13023738",
]
kwargs = [
{"quarter": 3},
{"quarter": 3},
{"campaign": 8},
{"campaign": 4},
{},
{"sector": 2},
]
periods = [0.782068488, 2.154911236, 0.669558, 4.098503000, 1.809886, 8.0635]
t0s = [
131.8940201,
133.498613,
2457393.81364 - 2454833,
2457063.80710000 - 2454833,
2456107.85507 - 2457000,
2459104.87232 - 2457000,
]
durs = np.asarray([1.239, 3.1341, 1, 2.3208, 3.694, 3.396]) / 24
depths = [
0.01157 * 0.01,
0.00850 * 0.01,
0.015450 ** 2,
1.603 * 0.01,
1.189 * 0.01,
5180 * 1e-6,
]
for name, period, t0, dur, kwarg, depth in zip(
names, periods, t0s, durs, kwargs, depths
):
tpf = lk.search_targetpixelfile(name, **kwarg).download()
r = centroid_test(
tpf,
period,
t0,
dur,
aperture_mask="pipeline",
plot=True,
transit_depths=depth,
)
r["figs"][0].savefig(
f"{testdir}/docs/{name.replace(' ','').lower()}.png",
dpi=200,
bbox_inches="tight",
)
def get_tpf(self):
"""
FIXME: refactor to tpf.py?
"""
res = lk.search_targetpixelfile(f"EPIC {self.epicid}",
campaign=self.campaign,
mission="K2")
tpf = res.download()
self.tpf = tpf
return tpf
def get_count_stars_in_flare_catalog_with_short_cadence_data():
"""Returns the number of targets in the flare catalog with short cadence data."""
flare_catalog = np.genfromtxt(catalog_path, delimiter=',', skip_header=1)
kepler_input_catalog_numbers = [target[0] for target in flare_catalog]
count_with_short_cadence = 0
for kepler_input_catalog_number in kepler_input_catalog_numbers:
short_cadence_observations = search_targetpixelfile(
kepler_input_catalog_number, cadence='short')
if len(short_cadence_observations) is not 0:
count_with_short_cadence += 1
return count_with_short_cadence
def test_cyclic_conversion(self):
tpfs = lightkurve.search_targetpixelfile(target="TIC 251848941", cadence=120, author="SPOC") \
.download_all(cutout_size=CUTOUT_SIZE)
for tpf in tpfs:
self.assertTrue((tpf.pipeline_mask ==
ApertureExtractor.from_pixels_to_boolean_mask(
ApertureExtractor.from_boolean_mask(
tpf.pipeline_mask, tpf.column,
tpf.row), tpf.column, tpf.row,
len(tpf.pipeline_mask[1]),
len(tpf.pipeline_mask[0]))).all())
def test_pld_aperture_mask():
"""Test for #523: does PLDCorrector.correct() accept separate apertures for
PLD pixels?"""
tpf = search_targetpixelfile("K2-205")[0].download()
# use only the pixels in the pipeline mask
lc_pipeline = tpf.to_corrector("pld").correct(pld_aperture_mask="pipeline",
restore_trend=False)
# use all pixels in the tpf
lc_all = tpf.to_corrector("pld").correct(pld_aperture_mask="all",
restore_trend=False)
# does this improve the correction?
assert lc_all.estimate_cdpp() < lc_pipeline.estimate_cdpp()
def get_tpf(self, campaign=None):
"""
FIXME: refactor to tpf.py?
"""
if campaign is None:
campaign = self.campaign
assert campaign in self.all_campaigns
res = lk.search_targetpixelfile(f"EPIC {self.epicid}",
campaign=campaign,
mission="K2")
tpf = res.download()
self.tpf = tpf
return tpf
def plot_EPIC_ID(epic, sigma_value = 5):
search = lk.search_targetpixelfile(epic, mission='K2')
print(search)
pixelfile = search.download(quality_bitmask='hard' ) #gets the data about the EPIC ID
print('*********Quarter :' ,pixelfile.quarter, 'Mission : ',pixelfile.mission )
#pixelfile.interact(notebook_url='localhost:8893')
fname = str(epic)+'.fits'
lc = pixelfile.to_lightcurve(aperture_mask='all') #gets the light curve information
lc = outlier_removal(lc, sigma_value) #calls the function that removes outliers
lc.to_fits(path=fname, overwrite=True)
# files.download(fname)
return lc #returns the light curve information
def xmkpy3_finder_chart_survey_fits_image_get_v1():
import lightkurve as lk
lk.log.setLevel('INFO')
import matplotlib.pyplot as plt
import astropy.units as u
from astropy.visualization import ImageNormalize, PercentileInterval, SqrtStretch
import os
import ntpath
# Exoplanet Kelper-138b is "KIC 7603200":
tpf = lk.search_targetpixelfile(target='kepler-138b', mission='kepler',
cadence='long', quarter=10).download(quality_bitmask=0)
print('TPF filename:', ntpath.basename(tpf.path))
print('TPF dirname: ', os.path.dirname(tpf.path))
target = 'Kepler-138b'
ra_deg = tpf.ra
dec_deg = tpf.dec
# get survey image data
width_height_arcmin = 3.00
survey = '2MASS-J'
survey_hdu, survey_hdr, survey_data, survey_wcs, survey_cframe = \
mkpy3_finder_chart_survey_fits_image_get_v1(ra_deg, dec_deg,
radius_arcmin=width_height_arcmin, survey=survey, verbose=True)
# create a matplotlib figure object
fig = plt.figure(figsize=(12, 12))
# create a matplotlib axis object with right ascension and declination axes
ax = plt.subplot(projection=survey_wcs)
norm = ImageNormalize(survey_data, interval=PercentileInterval(99.0),
stretch=SqrtStretch())
ax.imshow(survey_data, origin='lower', norm=norm, cmap='gray_r')
ax.set_xlabel('Right Ascension (J2000)')
ax.set_ylabel('Declination (J2000)')
ax.set_title('')
plt.suptitle(target)
# put a yellow circle at the target position
ax.scatter(ra_deg * u.deg, dec_deg * u.deg,
transform=ax.get_transform(survey_cframe),
s=600, edgecolor='yellow', facecolor='None', lw=3, zorder=100)
pname = 'mkpy3_plot.png'
if (pname != ''):
plt.savefig(pname, bbox_inches="tight")
print(pname, ' <--- plot filename has been written! :-)\n')
def tpf_sap(tic):
#search targetpixelfiles for given TIC ID
search_res = lk.search_targetpixelfile('TIC ' + str(tic))
#initialize SPOC found,first found
spoc_found = False
spoc_first = False
lc_holder = []
for i in range(len(search_res)):
#select search result object
search_i = search_res[i]
#skip if not SPOC, 120 s exposure
if (search_i.author.data[0] == 'SPOC') & (search_i.exptime.data[0]
== 120):
print("Found SPOC " + str(search_i.mission[0]) + " data for TIC " +
str(tic) + "!")
spoc_found = True
if (spoc_first == False) & (spoc_first is not None):
spoc_first = True
else:
continue
tpf = search_res[i].download()
if spoc_first == True:
# get apertures, median image, and WCS data for contamination plot
pipeline_mask = tpf.pipeline_mask
threshold_mask = tpf.create_threshold_mask(
threshold=10, reference_pixel='center')
median_im = np.nanmedian(tpf.hdu[1].data['FLUX'], axis=0)
im_header = tpf.hdu[2].header #used for later WCS projection
#reset spoc_first to None
spoc_first = None
# get lightcurve with pipeline mask
lc = tpf.to_lightcurve(aperture_mask=tpf.pipeline_mask)
lc = lc.remove_outliers(sigma=5.0)
lc['sector'] = np.repeat(
a=lc.sector,
repeats=len(lc)) #add sector label for my plotting functions
lc_holder.append(
lc.to_pandas().reset_index(drop=False)) #store in lc_holder
if spoc_found == False:
print("No SPOC data found for TIC " + str(tic) + ".")
spoc_lc = pd.DataFrame()
pipeline_mask = np.array([])
else:
spoc_lc = pd.concat(lc_holder) #combine lc into 1 pandas dataframe
return (spoc_lc, pipeline_mask, threshold_mask, median_im, im_header)
def make_lc(tic=None,epic=None,hostname=None,mission='tess',verbose=True):
"""Return a LightCurve object from TESS or K2 planet.
Keyword arguments:
Need one of:
tic -- TIC ID # of the host star
epic -- EPIC ID # of the host star
hostname -- host star name
mission -- which mission to get the data from (default 'tess')
verbose -- whether to print status updates (default False)
"""
if tic == None:
if epic:
tic = get_tic_from_epic(epic)
elif hostname:
tic = get_tic_from_name(hostname)
if verbose: print('Fetching TPF...')
if mission.lower() == 'tess':
tpf = lk.search_targetpixelfile(tic,mission='tess').download()
elif mission.lower() == 'k2':
epic = get_epic_from_tic(tic)
tpf = lk.search_targetpixelfile(epic,mission='k2').download()
else:
raise ValueError('Mission must be \'tess\' or \'k2\'.')
if verbose: print('Detrending...')
if mission.lower() == 'tess':
corrector = lk.PLDCorrector(tpf)
lc = corrector.correct()
elif mission.lower() == 'k2':
lc = tpf.to_lightcurve(aperture_mask=tpf.pipeline_mask)
lc.remove_outliers(sigma=6).flatten()
if verbose: print('Success')
return lc
def extract_sectors(object_info, cache_dir):
mission, mission_prefix, id_int = LcBuilder().parse_object_info(
object_info.mission_id())
object_sectors = None
if mission == "Kepler":
lcf_search_results = lightkurve.search_targetpixelfile(
object_info.mission_id(),
mission=object_info.mission_id(),
cadence="long")
object_sectors = lcf_search_results.download_all(
download_dir=cache_dir).quarter
elif mission == "K2":
lcf_search_results = lightkurve.search_targetpixelfile(
object_info.mission_id(),
mission=object_info.mission_id(),
cadence="long")
object_sectors = lcf_search_results.download_all(
download_dir=cache_dir).campaign
elif mission == "TESS":
lcf_search_results = lightkurve.search_tesscut(
object_info.mission_id())
object_sectors = lcf_search_results.download_all(
download_dir=cache_dir).sector
return object_sectors
def test_tess_pld_corrector():
tpf = search_targetpixelfile("TOI 700")[0].download()
pld = PLDCorrector(tpf)
# Is the correct filetype returned?
clc = pld.correct()
assert isinstance(clc, TessLightCurve)
# Do the diagnostic plots run?
pld.diagnose()
plt.close()
pld.diagnose_masks()
plt.close()
# Does sparse correction work?
pld.correct(sparse=True)
# Did the correction with default values help?
raw_lc = tpf.to_lightcurve(aperture_mask="threshold")
assert clc.estimate_cdpp() < raw_lc.estimate_cdpp()
def ProcessTarget(target, targetquarter, targetexp):
pixelfile = search_targetpixelfile(target, quarter=targetquarter, exptime=targetexp).download();
print("\nDownloaded")
pixelfile.plot(frame=1);
lc = pixelfile.to_lightcurve(aperture_mask=pixelfile.pipeline_mask);
lc.plot();
print("\nMask Done!")
"""lc = pixelfile.to_lightcurve(aperture_mask='all');
lc.plot();
print("\nAll Done!")"""
flat_lc = lc.flatten(window_length=401);
flat_lc.plot();
print("\nFlat Done!")
def find_planet_iter_per(star, quarter):
tpf = lk.search_targetpixelfile(star, quarter=quarter).download()
#tpf.plot(frame=100, scale='log', show_colorbar=True)
#plt.show()
lc = tpf.to_lightcurve(aperture_mask=tpf.pipeline_mask)
#lc.plot()
#plt.show();
flat, trend = lc.flatten(window_length=301, return_trend=True)
#ax = lc.errorbar(label=args.star) # plot() returns a matplotlib axes ...
#trend.plot(ax=ax, color='red', lw=2, label='Trend'); # which we can pass to the next plot() to use the same axes
#plt.show();
#flat.errorbar(label=args.star);
#plt.show();
best_planet_score = None
best_folded = None
best_result = None
best_interpolations = None
for best_fit_period_start in np.arange(0.5, 30.1, 0.5):
periodogram = flat.to_periodogram(method="bls", period=np.arange(best_fit_period_start, best_fit_period_start + 0.5, 0.0001))
best_fit_period = periodogram.period_at_max_power
transit_time_at_max_power = periodogram.transit_time_at_max_power
folded = flat.fold(period=best_fit_period, t0=transit_time_at_max_power)
interpolations = process_folded_lc(folded)
if is_there_a_planet(*interpolations):
score = planet_score(*interpolations)
# print(best_fit_period, transit_time_at_max_power, interpolations, score)
if best_planet_score is None or score < best_planet_score:
best_planet_score = score
best_folded = folded
best_result = (best_fit_period, transit_time_at_max_power)
best_interpolations = interpolations
# print(interpolations)
#best_folded.bin().scatter() # .errorbar();
#plt.show();
#best_folded.plot_river()
#plt.show();
if best_result is not None:
print(star, best_result[0], best_result[1])
else:
print(star, "No planet found")
def test_from_boolean_mask(self):
tpfs = lightkurve.search_targetpixelfile(target="TIC 251848941", cadence=120, author="SPOC")\
.download_all()
apertures = {}
for tpf in tpfs:
apertures[tpf.sector] = ApertureExtractor.from_boolean_mask(
tpf.pipeline_mask, tpf.column, tpf.row)
self.assertEquals(19, len(apertures[2]))
self.assertTrue(any(([649, 171] == x).all() for x in apertures[2]))
self.assertTrue(any(([649, 172] == x).all() for x in apertures[2]))
self.assertTrue(any(([650, 170] == x).all() for x in apertures[2]))
self.assertTrue(any(([650, 171] == x).all() for x in apertures[2]))
self.assertTrue(any(([650, 172] == x).all() for x in apertures[2]))
self.assertTrue(any(([650, 173] == x).all() for x in apertures[2]))
self.assertTrue(any(([650, 174] == x).all() for x in apertures[2]))
self.assertTrue(any(([651, 170] == x).all() for x in apertures[2]))
self.assertTrue(any(([651, 171] == x).all() for x in apertures[2]))
self.assertTrue(any(([651, 172] == x).all() for x in apertures[2]))
self.assertTrue(any(([651, 173] == x).all() for x in apertures[2]))
self.assertTrue(any(([651, 174] == x).all() for x in apertures[2]))
self.assertTrue(any(([652, 170] == x).all() for x in apertures[2]))
self.assertTrue(any(([652, 171] == x).all() for x in apertures[2]))
self.assertTrue(any(([652, 172] == x).all() for x in apertures[2]))
self.assertTrue(any(([652, 173] == x).all() for x in apertures[2]))
self.assertTrue(any(([653, 171] == x).all() for x in apertures[2]))
self.assertTrue(any(([653, 172] == x).all() for x in apertures[2]))
self.assertTrue(any(([653, 173] == x).all() for x in apertures[2]))
self.assertEquals(15, len(apertures[29]))
self.assertTrue(any(([1133, 142] == x).all() for x in apertures[29]))
self.assertTrue(any(([1133, 143] == x).all() for x in apertures[29]))
self.assertTrue(any(([1133, 144] == x).all() for x in apertures[29]))
self.assertTrue(any(([1133, 145] == x).all() for x in apertures[29]))
self.assertTrue(any(([1134, 141] == x).all() for x in apertures[29]))
self.assertTrue(any(([1134, 142] == x).all() for x in apertures[29]))
self.assertTrue(any(([1134, 143] == x).all() for x in apertures[29]))
self.assertTrue(any(([1134, 144] == x).all() for x in apertures[29]))
self.assertTrue(any(([1134, 145] == x).all() for x in apertures[29]))
self.assertTrue(any(([1135, 142] == x).all() for x in apertures[29]))
self.assertTrue(any(([1135, 143] == x).all() for x in apertures[29]))
self.assertTrue(any(([1135, 144] == x).all() for x in apertures[29]))
self.assertTrue(any(([1135, 145] == x).all() for x in apertures[29]))
self.assertTrue(any(([1136, 143] == x).all() for x in apertures[29]))
self.assertTrue(any(([1136, 144] == x).all() for x in apertures[29]))
def test_tpf():
"""
"""
t = Tpf(
ticid=TICID,
sector=SECTOR,
quality_bitmask="default",
apply_data_quality_mask=False,
)
tpf1 = t.get_tpf()
assert tpf1.targetid == TICID
assert tpf1.sector == SECTOR
res = lk.search_targetpixelfile(f"TIC {t.ticid}",
mission="TESS",
cadence="short",
sector=SECTOR)
tpf2 = res.download()
assert tpf1.targetid == tpf2.targetid
assert tpf1.sector == tpf2.sector
assert tpf1.quality_bitmask == tpf2.quality_bitmask
def plot_EPIC_ID(epic, sigma_value=5):
#gets the pixelfile data
pixelfile = lk.search_targetpixelfile(epic).download(
quality_bitmask="hardest") #gets the pixel data
lc = pixelfile.to_lightcurve(aperture_mask='all') #masks the noisy data
lc = outlier_removal(lc, sigma_value) #removes remaining outliers
lc = outlier_removal(lc, sigma_value) #removes remaining outliers
#creates the file path and exports the fits file
path = pathlib.Path(
"EPIC ID Analysis" + str(epic)
) #creates the path for the EPIC ID; the name of the folder is the EPIC ID
if path.exists() == False:
os.mkdir("EPIC ID Analysis\\" + str(epic))
file = "EPIC ID Analysis\\" + str(epic) + "\\" + str(
epic
) + "_Info.fits" #path for the fits file; e.g. EPIC ID Analysis/205008727/205008727_Info.fits
print("Fits directory: ", file)
lc.to_fits(path=file) #exports the fits file
lc.plot() #plots the graph
return lc #returns the lightcurve data