def qe_task(run, det_name, lambda_files, pd_ratio_file, gains,
mask_files=(), correction_image=None, temp_set_point=-100,
bias_frame=None, mondiode_func=None):
"""Single sensor execution of the QE task."""
file_prefix = make_file_prefix(run, det_name)
task = sensorTest.QeTask()
task.config.temp_set_point = temp_set_point
task.run(file_prefix, lambda_files, pd_ratio_file, mask_files, gains,
correction_image=correction_image, bias_frame=bias_frame,
mondiode_func=mondiode_func)
results_file = '%s_eotest_results.fits' % file_prefix
plots = sensorTest.EOTestPlots(file_prefix, results_file=results_file)
siteUtils.make_png_file(plots.qe,
'%s_qe.png' % file_prefix,
qe_file='%s_QE.fits' % file_prefix)
try:
plots.flat_fields(os.path.dirname(lambda_files[0]),
annotation='e-/pixel, gain-corrected, bias-subtracted')
except Exception as eobj:
print("Exception raised while creating flat fields:")
print(str(eobj))
'-M',
'--medians_file',
type=str,
help='file of median pixel values from wavelength scan dataset',
default=None)
parser.add_argument('-c',
'--correction_image',
type=str,
help='correction image for illumination non-uniformity',
default=None)
parser.add_argument('--vendor_data',
default=False,
action='store_true',
help='Have data from vendor')
args = parser.parse_args()
task = sensorTest.QeTask()
task.config.output_dir = args.output_dir
task.config.verbose = args.verbose
qe_files = args.files(args.qe_files, args.qe_file_list)
task.run(args.sensor_id,
qe_files,
args.pd_ratio_file,
args.mask_files(qe_files[0]),
args.system_gains(),
medians_file=args.medians_file,
vendor_data=args.vendor_data,
correction_image=args.correction_image)
def run_qe_task(sensor_id):
"Single sensor execution of the QE task."
import os
import sys
import lsst.eotest.sensor as sensorTest
import siteUtils
import eotestUtils
file_prefix = '%s_%s' % (sensor_id, siteUtils.getRunNumber())
lambda_files = siteUtils.dependency_glob(
'S*/%s_lambda_flat_*.fits' % sensor_id,
jobname=siteUtils.getProcessName('qe_raft_acq'),
description='Lambda files:')
pd_ratio_file = eotestUtils.getPhotodiodeRatioFile()
if pd_ratio_file is None:
message = ("The test-stand specific photodiode ratio file is " +
"not given in config/%s/eotest_calibrations.cfg." %
siteUtils.getSiteName())
raise RuntimeError(message)
correction_image = eotestUtils.getIlluminationNonUniformityImage()
if correction_image is None:
print()
print("WARNING: The correction image file is not given in")
print("config/%s/eotest_calibrations.cfg." % siteUtils.getSiteName())
print("No correction for non-uniform illumination will be applied.")
print()
sys.stdout.flush()
bias_frame = siteUtils.dependency_glob('%s_sflat*median_bias.fits' %
sensor_id,
description='Super bias frame:')[0]
mask_files = \
eotestUtils.glob_mask_files(pattern='%s_*mask.fits' % sensor_id)
gains = eotestUtils.getSensorGains(jobname='fe55_raft_analysis',
sensor_id=sensor_id)
task = sensorTest.QeTask()
task.config.temp_set_point = -100.
task.run(sensor_id,
lambda_files,
pd_ratio_file,
mask_files,
gains,
correction_image=correction_image,
bias_frame=bias_frame)
results_file \
= siteUtils.dependency_glob('%s_eotest_results.fits' % sensor_id,
jobname='fe55_raft_analysis',
description='Fe55 results file')[0]
plots = sensorTest.EOTestPlots(sensor_id, results_file=results_file)
siteUtils.make_png_file(plots.qe,
'%s_qe.png' % file_prefix,
qe_file='%s_QE.fits' % sensor_id)
try:
plots.flat_fields(
os.path.dirname(lambda_files[0]),
annotation='e-/pixel, gain-corrected, bias-subtracted')
except Exception as eobj:
print("Exception raised while creating flat fields:")
print(str(eobj))