def __init__(self, model_path, corpus_path, emb_path):
raw_corpus = myio.read_corpus(corpus_path)
embedding_layer = myio.create_embedding_layer(
raw_corpus,
n_d = 10,
cut_off = 1,
embs = load_embedding_iterator(emb_path)
)
weights = myio.create_idf_weights(corpus_path, embedding_layer)
say("vocab size={}, corpus size={}\n".format(
embedding_layer.n_V,
len(raw_corpus)
))
model = Model(args=None, embedding_layer=embedding_layer,
weights=weights)
model_data = model.load_model(model_path)
model.set_model(model_data)
model.dropout.set_value(0.0)
say("model initialized\n")
score_func = theano.function(
inputs = [ model.idts, model.idbs ],
outputs = model.scores,
on_unused_input='ignore'
)
self.model = model
self.score_func = score_func
say("scoring function compiled\n")
def __init__(self, model_path, corpus_path, emb_path):
raw_corpus = myio.read_corpus(corpus_path)
embedding_layer = myio.create_embedding_layer(
raw_corpus,
n_d=10,
cut_off=1,
embs=load_embedding_iterator(emb_path))
weights = myio.create_idf_weights(corpus_path, embedding_layer)
say("vocab size={}, corpus size={}\n".format(embedding_layer.n_V,
len(raw_corpus)))
model = Model(args=None,
embedding_layer=embedding_layer,
weights=weights)
model_data = model.load_model(model_path)
model.set_model(model_data)
model.dropout.set_value(0.0)
say("model initialized\n")
score_func = theano.function(inputs=[model.idts, model.idbs],
outputs=model.scores,
on_unused_input='ignore')
self.model = model
self.score_func = score_func
say("scoring function compiled\n")
def compose(stage):
setattr(Model, 'train_dataloader', train_dataloader)
setattr(Model, 'val_dataloader', val_dataloader)
# setattr(Model, 'test_dataloader', test_dataloader)
setattr(Model, 'build_loss', build_loss)
setattr(Model, 'configure_optimizers', configure_optimizers)
setattr(Model, 'training_step', training_step)
setattr(Model, 'validation_step', validation_step)
model = Model(stage)
model.build_loss()
return model
def test_is_cell_alive(self):
model = Model()
pattern = [
[0, 1, 0],
[0, 0, 0],
[0, 0, 0],
]
model.init_from_array(pattern)
_i = list(range(1, model.grid_size + 1))
_expect = [x == 2 for x in _i] # only i=2 is True
for (index, expect_value) in zip(_i, _expect):
r = model.is_cell_alive(index)
try:
self.assertEqual(expect_value, r)
except AssertionError as e:
print(f"i = {index}")
raise e
def objective_fn(**kwargs):
data_config, nn_config, total_intervals = make_model(**kwargs)
df = pd.read_csv('data/nk_data.csv')
model = Model(
data_config=data_config,
nn_config=nn_config,
data=df,
# intervals=total_intervals
)
model.build_nn()
idx = np.arange(720)
tr_idx, test_idx = train_test_split(idx, test_size=0.5, random_state=313)
history = model.train_nn(indices=list(tr_idx))
return np.min(history['val_loss'])
def calculate(self, alg):
"""
:param alg: name of algorithm to use
"""
if alg == 'erlang':
try:
traffic = self.checkEnabled(self.ids.traffic_input)
lines = self.checkEnabled(self.ids.lines_input)
block = self.checkEnabled(self.ids.block_rate_input)
model = Model(traffic, lines, block)
self.ids.result.text = str(model.calculate_erlang())
except ValueError:
self.popup.open()
if alg == 'engset':
try:
traffic = self.checkEnabled(self.ids.engset_traffic)
lines = self.checkEnabled(self.ids.engset_lines)
block = self.checkEnabled(self.ids.engset_block)
sources = self.checkEnabled(self.ids.sources)
model = Model(traffic, lines, block, sources)
self.ids.engset_result.text = str(model.calculate_engset())
except ValueError:
self.popup.open()
class Tests(unittest.TestCase):
def setUp(self):
self.model_p = Model(traffic=3.4, lines=10, blocking_rate=False)
self.model_n = Model(traffic=3.4, lines=False, blocking_rate=0.0019)
self.model_a = Model(traffic=False, lines=10, blocking_rate=0.0019)
self.engset_p = Model(traffic=3.4,
lines=10,
blocking_rate=False,
sources=500)
self.engset_n = Model(traffic=3.4,
lines=False,
blocking_rate=0.0018,
sources=500)
self.engset_a = Model(traffic=False,
lines=10,
blocking_rate=0.0018,
sources=500)
def test_erlang_p(self):
self.assertEqual(self.model_p.calculate_erlang(), 0.0019)
def test_erlang_n(self):
self.assertEqual(self.model_n.calculate_erlang(), 10)
def test_erlang_a(self):
self.assertEqual(self.model_a.calculate_erlang(), 3.5)
def test_engset_p(self):
self.assertAlmostEqual(self.engset_p.calculate_engset(), 0.0018)
def test_engset_n(self):
self.assertEqual(self.engset_n.calculate_engset(), 10)
def test_engset_a(self):
self.assertAlmostEqual(self.engset_a.calculate_engset(), 3.4)
def objective_func(batch_size,
lookback,
lr,
lstm_units,
lstm_act='relu',
cnn_act='relu',
filters=64):
n_epochs = 5000
data_config, nn_config, args, intervals, verbosity = make_model(
int(batch_size), int(lookback), n_epochs, lr, lstm_act, cnn_act,
lstm_units, filters)
model = Model(data_config=data_config,
nn_config=nn_config,
args=args,
intervals=intervals,
verbosity=verbosity)
model.build_nn()
model.train_nn()
mse = np.min(model.losses['val_losses']['mse'])
reset_graph()
return mse
def test__neighbours_gen(self):
model = Model()
pattern = [
[0, 1, 0],
[0, 0, 0],
[0, 0, 0],
]
model.init_from_array(pattern)
expect = [1, 0, 1, 1, 1, 1, 0, 0, 0]
for i in range(1, 7 + 1):
_y, _x = model.index_to_row_col(i)
n = model._neighbours_gen(_y, _x)
r = sum(n)
try:
self.assertEqual(expect[i - 1], r)
except AssertionError as e:
print(f"i = {i}")
print(f"_y, _x = {_y, _x}")
raise e
from torch.utils.data import DataLoader
from torchvision.datasets import ImageFolder
from torchvision import transforms
from torchvision.models import resnet18, resnet34
import pytorch_lightning as pl
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
from main import Model
if __name__ == "__main__":
f = "epoch=9.ckpt"
model = Model.load_from_checkpoint(f"./checkpoints/{f}")
model = model.model
model = nn.Sequential(
model,
nn.Softmax(1)
)
model.eval()
example = torch.rand(1, 3, 224, 224)
traced_script_module = torch.jit.trace(model, example)
traced_script_module.save("android/model.pt")
print(model(example).shape)
print("ERROR, eval_bleu get empty input or un-match inputs")
return
if type(hyps_resp[0]) != list:
print(
"ERROR, eval_distinct takes in a list of <class 'list'>, get a list of {} instead"
.format(type(hyps_resp[0])))
return
return corpus_bleu(ref_resp,
hyps_resp,
smoothing_function=SmoothingFunction().method1)
if __name__ == '__main__':
model = Model()
if len(sys.argv) < 3:
print('Too few args for this script')
random_test = sys.argv[1]
biased_test = sys.argv[2]
random_test_data = read_dialog(random_test)
biased_test_data = read_dialog(biased_test)
random_ref_resp = [[j.split() for j in i['golden_response']]
for i in random_test_data]
biased_ref_resp = [[j.split() for j in i['golden_response']]
for i in biased_test_data]
for i in random_test_data:
if 'golden_response' in i:
prob_true /= (sum((probs.get(k, 0) for k in vocab)) + eos_probs)
loss -= math.log(prob_true)
else:
loss = float('inf')
num_tokens += 1
else:
num_unk += 1
probs, eos_probs = model.next_word_probability(context, resp_gt)
eos_probs /= (sum((probs.get(k, 0) for k in vocab)) + eos_probs)
loss -= math.log(eos_probs)
num_tokens += 1
return loss / num_tokens, math.exp(loss / num_tokens)
if __name__ == '__main__':
model = Model()
if len(sys.argv) < 4:
print('Too few args for this script')
vocab_file = sys.argv[1]
random_test = sys.argv[2]
biased_test = sys.argv[3]
with codecs.open(vocab_file, 'r', 'utf-8') as f:
vocab = set([i.strip() for i in f.readlines() if len(i.strip()) != 0])
random_test_data = read_dialog(random_test)
biased_test_data = read_dialog(biased_test)
random_ppl = 0
biased_ppl = 0
def predict_basin(
basin: str,
run_dir: Union[str, Path],
camels_dir: Union[str, Path],
period: str = "train",
epoch: int = 30,
):
if isinstance(run_dir, str):
run_dir = Path(run_dir)
elif not isinstance(run_dir, Path):
raise TypeError(f"run_dir must be str or Path, not {type(run_dir)}")
if isinstance(camels_dir, str):
camels_dir = Path(camels_dir)
elif not isinstance(camels_dir, Path):
raise TypeError(f"run_dir must be str or Path, not {type(camels_dir)}")
with open(run_dir / "cfg.json", "r") as fp:
run_cfg = json.load(fp)
if not period in ["train", "val"]:
raise ValueError("period must be either train or val")
basins = get_basin_list()
db_path = str(run_dir / "attributes.db")
attributes = load_attributes(db_path=db_path,
basins=basins,
drop_lat_lon=True)
means = attributes.mean()
stds = attributes.std()
attrs_count = len(attributes.columns)
timeseries_count = 6
input_size_stat = timeseries_count if run_cfg["no_static"] else attrs_count
input_size_dyn = (timeseries_count if
(run_cfg["no_static"] or not run_cfg["concat_static"])
else timeseries_count + attrs_count)
model = Model(
input_size_dyn=input_size_dyn,
input_size_stat=input_size_stat,
hidden_size=run_cfg["hidden_size"],
dropout=run_cfg["dropout"],
concat_static=run_cfg["concat_static"],
no_static=run_cfg["no_static"],
).to(DEVICE)
# load trained model
weight_file = run_dir / f"model_epoch{epoch}.pt"
model.load_state_dict(torch.load(weight_file, map_location=DEVICE))
ds_test = CamelsTXT(
camels_root=camels_dir,
basin=basin,
dates=[
GLOBAL_SETTINGS[f"{period}_start"],
GLOBAL_SETTINGS[f"{period}_end"]
],
is_train=False,
seq_length=run_cfg["seq_length"],
with_attributes=True,
attribute_means=means,
attribute_stds=stds,
concat_static=run_cfg["concat_static"],
db_path=db_path,
)
date_range = ds_test.dates_index[run_cfg["seq_length"] - 1:]
loader = DataLoader(ds_test, batch_size=1024, shuffle=False, num_workers=4)
preds, obs = evaluate_basin(model, loader)
df = pd.DataFrame(data={
"qobs": obs.flatten(),
"qsim": preds.flatten()
},
index=date_range)
results = df
# plt.plot(date_range, results["qobs"], label="Obs")
# plt.plot(date_range, results["qsim"], label="Preds")
# plt.legend()
# plt.savefig(f"{run_dir}/pred_basin_{basin}.pdf")
# plt.close()
return results, date_range
# Import parameters for scenario
scenario_mod = importlib.import_module("params.scenarios.full")
print("scenarios.params_sensitivity: ", scenario_mod.params_scenario)
# Import const parameters
const_file = "default_consts" # "default_consts" # "default_consts" # "single_agent_consts" "alternative_consts"
consts_mod = importlib.import_module("params.consts." + const_file)
print("const file", const_file)
# Seed
seed = 1
consts_mod.params_const["gridpoints_x"] = 75
consts_mod.params_const["gridpoints_y"] = 50
# === RUN ===
m_test = Model("Map/", int(seed), consts_mod.params_const,
sa_mod.params_sensitivity, scenario_mod.params_scenario)
# === PLOT ====
# Plot Map for Farming Productivity Index
title = "Arability"
ax = plot_map(m_test.map,
m_test.map.arability_c * 100,
r"Arability Index $a(c)$",
cmap_arability,
0.01,
100,
arability_legend=True)
ax.set_title("")
plt.savefig("Map/" + title + ".pdf", bbox_inches="tight", pad_inches=0)
# Plot Map for Trees.
def setUp(self):
self.model_p = Model(traffic=3.4, lines=10, blocking_rate=False)
self.model_n = Model(traffic=3.4, lines=False, blocking_rate=0.0019)
self.model_a = Model(traffic=False, lines=10, blocking_rate=0.0019)
self.engset_p = Model(traffic=3.4,
lines=10,
blocking_rate=False,
sources=500)
self.engset_n = Model(traffic=3.4,
lines=False,
blocking_rate=0.0018,
sources=500)
self.engset_a = Model(traffic=False,
lines=10,
blocking_rate=0.0018,
sources=500)
import time
import vk_api
from main import Model
from parse import parse
from compare import compare
from collections import Counter
list_group_overhear = [80178582]
test = Model(login='******', passw='*')
parser = parse()
compare = compare()
my_group_response = test.get_subscribe(11853247)
# получает людей через подслушано
people_response = test.get_local_people()
# очишает его
people = parse.parse_response_people_id(people_response)
# парсит его
my_groups = parse.parse_group(my_group_response)
print(">>>>---<<<<<")
print(my_groups)
lal = []
for white in range(len(my_groups)):
lal.extend(test.isMembers(my_groups[white], people))
app = Flask(__name__)
@app.route("/", methods=['POST','GET'])
def index():
if (request.method == "POST"):
data = request.form['content']
# run()
try:
numbers = list(map(lambda x: float(x), data.split(',')))
output = single_predict(model, numbers)
except:
output = "You have to write 4 numbers separated by commas"
return render_template('index.html', value = output)
else:
return render_template('index.html')
if __name__ == '__main__':
model = Model()
model.load_state_dict(torch.load('models/model_v1'))
app.run(debug=True)
from data import loading_data
from main import Model
def image(filename):
image = cv2.imread(filename, cv2.IMREAD_COLOR)
gray = cv2.cvtColor(image, cv2.COLOR_BGR2GRAY)
img = cv2.resize(gray, (28, 28), interpolation=cv2.INTER_AREA)
img = img.reshape(1, 28, 28, 1)
img = img / 255.0
return img
if __name__ == "__main__":
model = Model(input_shape=(28, 28, 1), classes=10)
train_ds, test_ds = loading_data()
model.compile(
learning_rate=0.01,
optimizer='sgd',
loss=tf.keras.losses.SparseCategoricalCrossentropy(from_logits=True))
model.fit(epochs=15, train_ds=train_ds, test_ds=test_ds)
#filename='images/9.jpg'
#img = image(filename)
#pred = nn.predict(img)
#final_pred = np.argmax(pred)
#print(pred)
#print(final_pred)
model.save('digit_model.h5')
def generate(self, graph):
x = []
y = []
inputs = []
for i in range(self.lin):
y.append([])
try:
if graph == 'lines':
if self.lin == 1:
inputs.append(int(self.ids.line_one_input.text))
elif self.lin == 2:
inputs.append(int(self.ids.line_one_input.text))
inputs.append(int(self.ids.line_two_input.text))
elif self.lin == 3:
inputs.append(int(self.ids.line_one_input.text))
inputs.append(int(self.ids.line_two_input.text))
inputs.append(int(self.ids.line_three_input.text))
elif self.lin == 4:
inputs.append(int(self.ids.line_one_input.text))
inputs.append(int(self.ids.line_two_input.text))
inputs.append(int(self.ids.line_three_input.text))
inputs.append(int(self.ids.line_four_input.text))
step = float(self.ids.spinner_id.text)
n_steps = int(floor((float(self.ids.max_traffic.text) - float(self.ids.min_traffic.text)) / step))
x.append(float(self.ids.min_traffic.text))
for i in range(n_steps):
x.append(x[i] + step)
print(x[i])
for i in range(self.lin):
for j in range(n_steps + 1):
model = Model(traffic=x[j], lines=inputs[i], blocking_rate=False)
y[i].append(model.calculate_erlang())
print(y[i])
elif graph == 'block':
if self.lin == 1:
inputs.append(float(self.ids.block_one_input.text))
elif self.lin == 2:
inputs.append(float(self.ids.block_one_input.text))
inputs.append(float(self.ids.block_two_input.text))
elif self.lin == 3:
inputs.append(float(self.ids.block_one_input.text))
inputs.append(float(self.ids.block_two_input.text))
inputs.append(float(self.ids.block_three_input.text))
elif self.lin == 4:
inputs.append(float(self.ids.block_one_input.text))
inputs.append(float(self.ids.block_two_input.text))
inputs.append(float(self.ids.block_three_input.text))
inputs.append(float(self.ids.block_four_input.text))
step = int(self.ids.spinner2_id.text)
n_steps = int(floor((int(self.ids.max_lines.text) - int(self.ids.min_lines.text)) / step))
x.append(int(self.ids.min_lines.text))
print(n_steps)
print(x)
for i in range(n_steps):
x.append(x[i] + step)
for i in range(self.lin):
for j in range(n_steps+1):
model = Model(traffic=False, lines= x[j], blocking_rate=inputs[i])
y[i].append(model.calculate_erlang())
print(y[i])
generate_graph(x, y, inputs, graph)
except ValueError:
raise
import pytest
from main import cube_vertices
from main import tex_coord
from main import Model
from main import normalize
m = Model()
#Test the verticies and bounds, why is this useful?
class mainTests():
position = (10,10,10)
assert normalize(position) == (10,10,10)
assert normalize(position) != (11,9,10)
position = (1,-1,100)
assert normalize(position) == (1,-1,100)
assert normalize(position) != (1,1,100)
#test that the cube is defined correctly
#x,y,z,n
#x-n,y+n,z-n, x-n,y+n,z+n, x+n,y+n,z+n, x+n,y+n,z-n, # top
#x-n,y-n,z-n, x+n,y-n,z-n, x+n,y-n,z+n, x-n,y-n,z+n, # bottom
#x-n,y-n,z-n, x-n,y-n,z+n, x-n,y+n,z+n, x-n,y+n,z-n, # left
#x+n,y-n,z+n, x+n,y-n,z-n, x+n,y+n,z-n, x+n,y+n,z+n, # right
#x-n,y-n,z+n, x+n,y-n,z+n, x+n,y+n,z+n, x-n,y+n,z+n, # front
#x+n,y-n,z-n, x-n,y-n,z-n, x-n,y+n,z-n, x+n,y+n,z-n, # back
assert cube_vertices(1,1,1,1) == [0, 2, 0, 0, 2, 2, 2, 2, 2, 2, 2, 0,
import time
import vk_api
from main import Model
from parse import parse
from compare import compare
from collections import Counter
list_group_overhear = [80178582]
test = Model(login="******", passw="*")
parser = parse()
compare = compare()
my_group_response = test.get_subscribe(11853247)
# получает людей через подслушано
people_response = test.get_local_people()
# очишает его
people = parse.parse_response_people_id(people_response)
# парсит его
my_groups = parse.parse_group(my_group_response)
print(">>>>---<<<<<")
print(my_groups)
lal = []
def __len__(self):
return self.features.shape[0]
def __getitem__(self, idx):
if torch.is_tensor(idx):
idx = idx.tolist()
sample = self.features[idx]
return sample, sample
if __name__ == "__main__":
dataset = RepresentationDataset(nuclear_charge=1)
vae_structure = VAE(dataset.features.shape[-1], layer_size=128, n_layers=2, variant=3,
dimensions=2, activation=F.leaky_relu)
model = Model(dataset=dataset, model=vae_structure, epochs=50, learning_rate=3e-3, batch_size=100,
log_interval=100)
print(3e-2)
model.fit()
model.set_learning_rate(1e-2)
print(1e-2)
model.epochs = 30
model.fit()
model.set_learning_rate(3e-3)
print(3e-3)
model.epochs = 90
model.fit()
model.set_learning_rate(1e-3)
print(1e-3)
import re
from collections import defaultdict
from data import Synthesize
from matplotlib import pyplot as plt
from matplotlib.ticker import MultipleLocator
from gurobipy import GRB
from main import Model
from analysis import plot_results
from os import path, makedirs
model = Model('Sensibility analysis of original model')
# model.AE = 0.95
# model.AZ *= 0.5
# model.AC *= 0.8
# model.AQ *= 2
# model.P *= 1.5
#
# for period in model.D_t:
# model.D_t[period] *= 1.2
# for source in model.sources:
# if source in ['coal', 'oil', 'gas']:
# model.QM_i[source] *= 0.7
if __name__ == '__main__':
model.optimize()
folder = 'storage_improves'
dirname = path.join('sens_analysis_results', folder)
if not path.exists(dirname):
plot_dir = path.join(dirname, 'plots')
gurobi_files_dir = path.join(dirname, 'gurobi_files')
makedirs(plot_dir)
if __name__ == '__main__':
#key is date
# key = sys.argv[1]
#test_datas = load_predict_data('./rb1710/rb1710(1小时).csv')
path = './data20190623/test_i9888_60min.csv'
dates, imgs, labels = load_predict_data(
'./data20190623/test_i9888_60min.csv')
#imgs = np.expand_dims(test_datas[key], axis=0)
print dates.shape, imgs.shape
# pdb.set_trace()
image = tf.placeholder(tf.float32, [None, 128, 6])
label = tf.placeholder(tf.float32, [None, 3])
dropout = tf.placeholder(tf.float32)
model = Model(image, label, dropout=dropout)
config = tf.ConfigProto()
config.gpu_options.allow_growth = True
#exit(0)
glob_step = 'data-00000-of-00001' #10001
saver = tf.train.Saver()
#save_path = 'models/i9888_60min_model/i9888_60min_best_validation.ckpt.{}'.format(glob_step)
save_path = 'checkpoints/i9888_60min_best_validation.ckpt.{}'.format(
glob_step)
with tf.Session(config=config) as sess:
#sess.run(tf.global_variables_initializer())
#saver.restore(sess, save_path)
saver = tf.train.import_meta_graph(
"./models/i9888_60min_model/i9888_60min_best_validation.ckpt.meta")
