def body(self, master):
#
# Popup window
#
row = 0
label = Label(master, text= self.text)
label.grid(row=row, column=0, sticky=Tkinter.EW)
row = row + 1
self.multiSelect = ScrolledListbox(master,
width = 50,
height = 5,
selectmode = Tkinter.MULTIPLE,
initial_list = self.selectionList)
self.multiSelect.grid(row=row, column=0, sticky=Tkinter.E, ipadx = 20)
master.grid_columnconfigure(0, weight=1)
master.grid_rowconfigure(row, weight=1)
if self.selectedItems:
self.multiSelect.setSelectedItems(self.selectedItems)
if self.endText:
row = row + 1
label = Label(master, text= self.endText)
label.grid(row=row, column=0, sticky=Tkinter.EW)
row = row + 1
texts = [ 'OK' ]
commands = [ self.ok ] # This calls 'ok' in BasePopup, this then calls 'apply' in here
buttons = createDismissHelpButtonList(master, texts=texts, commands=commands, dismiss_text = self.dismissText, help_url=self.help_url)
buttons.grid(row=row, column=0)
def body(self, master):
if self.infoList:
columnspan = 2
else:
columnspan = 1
row = 0
label = Label(master, text=self.infoText)
label.grid(row=row, column=0, columnspan=columnspan, sticky=Tkinter.W)
if self.infoList:
for infoListItem in self.infoList:
row = row + 1
label = Label(master, text=infoListItem)
label.grid(row=row, column=0, sticky=Tkinter.E)
value = self.infoDict[infoListItem]
if type(value) == type(''):
value = "[" + value + "]"
else:
value = str(value)
label = Label(master, text=value)
label.grid(row=row, column=1, sticky=Tkinter.W)
row = row + 1
button = createDismissButton(master,
dismiss_text='Continue',
dismiss_cmd=self.destroy)
button.grid(row=row, column=0, columnspan=columnspan)
def body(self, guiFrame):
ProgressBar.body(self, guiFrame)
guiFrame.expandGrid(2,3)
self.stepLabel = Label(guiFrame, text='Best step: ', grid=(0,3))
frame = LabelFrame(guiFrame, text='Best mappings', grid=(1,0), gridSpan=(1,4))
row = 0
for i in range(self.ensembleSize):
label = Label(frame, text='', pady=0, font='Courier 10',
borderwidth=0, grid=(row,0), sticky='ew')
self.labels.append(label)
row +=1
guiFrame.grid_rowconfigure(2, weight=1)
self.graph = ScrolledGraph(guiFrame, width=450, height=300,
graphType='scatter', title='Typing Scores',
xLabel='Spin System', yLabel='Score',
grid=(2,0), gridSpan=(1,4))
self.buttonList = ButtonList(guiFrame, texts=['Close',], commands=[self.done],
grid=(3,0), gridSpan=(1,4))
self.buttonList.buttons[0].disable()
def __init__(self,
parent,
label1,
label2='',
separator=': ',
label1_width=20,
label2_width=60,
label1_anchor=Tkinter.E,
label2_anchor=Tkinter.W,
*args,
**kw):
apply(Frame.__init__, (self, parent) + args, kw)
self.grid_columnconfigure(1, weight=1)
self.separator = separator
text = label1 + self.separator
self.label1 = Label(self,
text=text,
width=label1_width,
anchor=label1_anchor)
self.label1.grid(row=0, column=0, sticky=Tkinter.EW)
text = label2
self.label2 = Label(self,
text=text,
width=label2_width,
anchor=label2_anchor)
self.label2.grid(row=0, column=1, sticky=Tkinter.EW)
def body(self, parent):
self.bw = 2 # borderwidth
width = self.cWidth + self.bw
height = self.cHeight + self.bw
self.label = Label(parent, text=self.text)
self.label.grid(row=0, column=0, sticky=Tkinter.W)
self.percent = Label(parent, text=' %')
self.percent.grid(row=0, column=2, sticky=Tkinter.W)
self.canvas = Canvas(parent,
background='grey70',
width=width,
height=height)
self.canvas.grid(row=0, column=1, sticky=Tkinter.W)
self.canvas.create_rectangle(0,
0,
width,
height,
outline='black',
width=self.bw)
self.bar = self.canvas.create_rectangle(self.bw,
self.bw,
self.bw,
self.cHeight,
outline='#B05848',
fill='#B05848',
width=self.bw)
self.update()
def createKey(self, key):
attr = key[-1]
s = attr.name
if (len(key) > 1):
if (type(key[-2]) == type(0)):
role = key[-3]
n = key[-2]
t = '%s[%d]' % (role.otherClass.name, n)
else:
role = key[-2]
t = role.otherClass.name
else:
t = self.metaclass.name
title_label = Label(self.parent_frame)
class_label = Label(self.parent_frame, text=t, anchor=Tkinter.W)
name_label = Label(self.parent_frame,
text=s,
anchor=Tkinter.W,
bg=name_bg)
value_label = Label(self.parent_frame, anchor=Tkinter.W, bg=value_bg)
self.widget_dict[key] = (title_label, class_label, name_label,
value_label)
def body(self, master):
#
# Popup window
#
row = 0
if self.topText:
label = Label(master, text= self.topText)
label.grid(row=row, column=0, columnspan = 2, sticky=Tkinter.EW)
row = row + 1
label = Label(master, text= self.text)
label.grid(row=row, column=0, sticky=Tkinter.EW)
self.menu = PulldownMenu(master, entries = self.selectionList, selected_index = self.selectedIndex)
self.menu.grid(row=row, column=1, sticky=Tkinter.E, ipadx = 20)
row = row + 1
texts = [ 'OK' ]
commands = [ self.ok ] # This calls 'ok' in BasePopup, this then calls 'apply' in here
if self.dismissButton:
buttons = createDismissHelpButtonList(master, texts=texts, commands=commands, dismiss_text = self.dismissText, help_url=self.help_url)
else:
buttons = createHelpButtonList(master, texts=texts, commands=commands, help_url=self.help_url)
buttons.grid(row=row, column=0, columnspan = 3)
def __init__(self, parent, analysis, orientation='horizontal', callback = None, *args, **kw):
self.analysis = analysis
self.callback = callback
apply(Frame.__init__, (self, parent) + args, kw)
label = Label(self, text='Experiment:')
label.grid(row=0, column=0, sticky='ne')
self.expt_list = ExperimentList(self, self.analysis.getExperiments,
callback=self.setSpectra)
self.expt_list.grid(row=0, column=1, sticky='nw')
if orientation in ['horizontal','h','H',Tkinter.HORIZONTAL]:
row = 0
col = 2
else:
row = 1
col = 0
label = Label(self, text='Spectrum:')
label.grid(row=row, column=col, sticky='ne')
self.spectrum_list = SpectrumList(self, self.getSpectra,
callback=self.setSpectrumProperties)
self.spectrum_list.grid(row=row, column=col+1, sticky='nw')
for func in notify_funcs:
Implementation.registerNotify(self.setExperiments, 'ccp.nmr.Nmr.Experiment', func)
Implementation.registerNotify(self.setSpectra, 'ccp.nmr.Nmr.DataSource', func)
def body(self, master):
#
# Popup gui
#
# First row
row = 0
label = Label(master, text="Choose a naming system:")
label.grid(row=row, column=0, sticky=Tkinter.W)
row = row + 1
label = Label(master, text="(% matches in brackets)")
label.grid(row=row, column=0, sticky=Tkinter.W)
row = row + 1
self.menu = PulldownMenu(master, entries=self.namingSysList)
self.menu.grid(row=row, column=0, sticky=Tkinter.EW)
row = row + 1
texts = ['OK']
commands = [
self.ok
] # This calls 'ok' in BasePopup, this then calls 'apply' in here
buttons = createDismissHelpButtonList(master,
texts=texts,
commands=commands,
dismiss_text='Exit',
help_url=self.help_url)
buttons.grid(row=row, column=0)
def body(self, master):
master.grid_columnconfigure(0, weight=1)
for i in range(3):
master.grid_rowconfigure(i, weight=1)
self.geometry('600x400')
# Master is the owner widget (not self.parent) - parent of the widget here
row = 0
label = Label(master,
text="Residue %s-%d" %
(self.nmrRes.molResidue.ccpCode, self.nmrRes.seqCode))
label.grid(row=row, column=0, sticky=Tkinter.W)
row = row + 1
label = Label(master, text=self.message)
label.grid(row=row, column=0, sticky=Tkinter.W)
row = row + 1
self.menu = PulldownMenu(master, entries=self.optionList)
self.menu.grid(row=row, column=0, sticky=Tkinter.EW)
row = row + 1
texts = ['OK']
commands = [
self.ok
] # This calls 'ok' in BasePopup, this then calls 'apply' in here
buttons = createHelpButtonList(master,
texts=texts,
commands=commands,
help_url=self.help_url)
buttons.grid(row=row, column=0)
def body(self, master):
master.grid_rowconfigure(0, weight=1)
master.grid_columnconfigure(1, weight=1)
row = 0
if (self.message):
label = Label(master, text=self.message)
label.grid(row=row, column=0, columnspan=2, sticky=Tkinter.W)
row = row + 1
if (self.label):
label = Label(master, text=self.label)
label.grid(row=row, column=0, sticky=Tkinter.W)
self.itemMenu = PulldownMenu(master, entries=self.entries)
self.itemMenu.grid(row=row, column=1, sticky=Tkinter.EW)
row = row + 1
texts = [self.select_text]
commands = [self.ok]
buttons = createDismissHelpButtonList(master,
texts=texts,
commands=commands,
dismiss_text='Cancel')
buttons.grid(row=row, column=0, columnspan=2, sticky=Tkinter.EW)
def __init__(self, parent, peakList):
apply(Frame.__init__, (self, parent) )
#parent.grid_columnconfigure(0, weight=1)
#parent.grid_rowconfigure(1, weight=1)
#self.grid_columnconfigure(1, weight=1)
#self.grid_columnconfigure(2, weight=1)
self.parent = parent
self.peakList = peakList
self.specLabel = Label(self, text='Spectrum: ' )
self.listLabel = Label(self, text='Peak List: ' )
self.dimLabel = Label(self, text='Dimension' )
self.adjustLabel = Label(self, text='Adjustment')
self.specLabel.grid(row = 0, column = 0, columnspan=2, sticky='nsew')
self.listLabel.grid(row = 0, column = 2, columnspan=1, sticky='nsew')
self.dimLabel.grid(row = 1, column = 0, columnspan=1, sticky='nsew')
self.adjustLabel.grid(row = 1, column = 1, columnspan=2, sticky='nsew')
self.goButton = Button(self, text='Go!', command=self.go,
tipText='Commit the re-referencing adjustment')
self.clearButton = Button(self, text='Clear', command=self.update,
tipText='Clear the input re-referencing values')
self.cancelButton = Button(self, text='Cancel', command=self.close,
tipText='Abort operation without making any changes')
self.update()
def body(self, master):
row = 0
label = Label(master, text= "CcpNmr resonance -> atom mapping file writer.")
label.grid(row=row, column=0, columnspan = 2, sticky=Tkinter.W)
row += 1
label = Label(master, text= "File formats:")
label.grid(row=row, column=0, sticky=Tkinter.W)
self.formatListBox = ScrolledListbox(master, width = 50, height = 5, selectmode = Tkinter.MULTIPLE,
initial_list = self.formats)
self.formatListBox.grid(row=row, column=1, sticky=Tkinter.EW)
# Default is all formats selected...
self.formatListBox.setSelectedItems(self.formatListBox.getItems())
row += 1
label = Label(master, text= "Mapping output file:")
label.grid(row=row, column=0, sticky=Tkinter.W)
self.fileButton = Tkinter.Button(master, text = self.defaultText, command = self.selectFile)
self.fileButton.grid(row=row, column=1, sticky=Tkinter.W)
row += 1
texts = [ 'Write mapping' ]
commands = [ self.ok ] # This calls 'ok' in BasePopup, this then calls 'apply' in here
buttons = createDismissHelpButtonList(master, texts=texts, commands=commands, help_url=self.help_url)
buttons.grid(row=row, columnspan = 2, column=0)
def body(self, guiFrame):
guiFrame.grid_rowconfigure(0, weight=1)
guiFrame.grid_columnconfigure(1, weight=1)
row = 0
if self.message:
label = Label(guiFrame,
text=self.message,
gridSpan=(1, 2),
grid=(row, 0))
row += 1
if self.label:
label = Label(guiFrame, text=self.label, grid=(row, 0))
self.itemMenu = PulldownList(guiFrame,
texts=self.entries,
objects=self.entries,
index=self.default,
grid=(row, 1))
row += 1
texts = [self.select_text, 'Cancel']
commands = [self.ok, self.cancel]
buttons = ButtonList(guiFrame,
texts=texts,
commands=commands,
gridSpan=(1, 2),
grid=(row, 0))
def body(self, master):
master.grid_columnconfigure(1, weight=1)
row = 0
label = Label(master, text='Axis unit name: ', grid=(row, 0))
tipText = 'Short textual name for the unit, e.g. "KPa" or "ms"'
self.nameEntry = Entry(master,
width=10,
grid=(row, 1),
tipText=tipText)
row += 1
label = Label(master, text='Unit is backwards: ', grid=(row, 0))
tipText = 'Whether the axis values decrease left to right & bottom to top. For example "ppm" does, but most units do not'
self.backwardsMenu = BooleanPulldownMenu(master,
grid=(row, 1),
tipText=tipText)
row += 1
tipTexts = [
'Make a new unit specification using the stated options and close this popup'
]
texts = ['Create']
commands = [self.ok]
buttons = UtilityButtonList(master,
texts=texts,
commands=commands,
closeText='Cancel',
helpUrl=self.help_url,
grid=(row, 0),
gridSpan=(1, 2),
tipTexts=tipTexts)
master.grid_rowconfigure(row, weight=1)
def addWidget(self, i, value=None):
row = i % self.wrap
col = i // self.wrap
if self.widgetType in ('Entry', 'IntEntry', 'FloatEntry'):
option = ''
if i < len(self.options):
option = self.options[i]
label = Label(self.topFrame, text=option or '', anchor='w')
label.grid(row=row, column=2 * col, sticky=Tkinter.E)
self.labels.append(label)
widget = self.widgetClass(self.topFrame, text=value, width=12)
widget.grid(row=row, column=2 * col + 1, sticky=Tkinter.EW)
widget.bind('<KeyPress-Return>', self.commit)
widget.bind('<KeyPress-Escape>', self.cancel)
elif self.widgetType == 'PulldownList':
index = -1
if value in self.options:
index = self.options.index(value or self.options[0])
widget = self.widgetClass(self.topFrame)
widget.setup(self.options, self.options, index)
widget.grid(row=row,
column=2 * col,
columnspan=2,
sticky=Tkinter.W)
elif self.widgetType == 'PulldownMenu':
index = -1
if value in self.options:
index = self.options.index(value or self.options[0])
widget = self.widgetClass(self.topFrame)
widget.setup(self.options, index)
widget.grid(row=row,
column=2 * col,
columnspan=2,
sticky=Tkinter.W)
elif self.widgetType == 'CheckButton':
widget = self.widgetClass(self.topFrame)
widget.set(value)
widget.grid(row=row, column=2 * col, sticky=Tkinter.W)
option = ''
if row < len(self.options):
option = self.options[i]
label = Label(self.topFrame, text=option or '', anchor='w')
label.grid(row=row, column=2 * col + 1, sticky=Tkinter.W)
self.labels.append(label)
else:
raise 'Widget type %s not supported in MultiWidget' % self.widgetType
return widget
def body(self, guiParent):
self.geometry('600x300')
guiParent.grid_columnconfigure(1, weight=1)
url = ''
if self.server:
url = self.server.url
label = Label(guiParent, text='Server location: %s' % url)
label.grid(row=0, column=0, sticky='w', columnspan=2)
label = Label(guiParent,
text='Installation root: %s%s' %
(self.installRoot, os.sep))
label.grid(row=1, column=0, sticky='w', columnspan=2)
editWidgets = [None] * 5
editGetCallbacks = [None, self.toggleSelected, None, None, None]
editSetCallbacks = [None] * 5
guiParent.grid_rowconfigure(2, weight=1)
headingList = [
'File', 'Install?', 'Date', 'Relative Path', 'Priority', 'Comments'
]
self.scrolledMatrix = ScrolledMatrix(guiParent,
headingList=headingList,
highlightType=0,
editWidgets=editWidgets,
callback=self.selectCell,
editGetCallbacks=editGetCallbacks,
editSetCallbacks=editSetCallbacks)
self.scrolledMatrix.grid(row=2, column=0, columnspan=2, sticky='nsew')
if self.exitOnClose:
txt = 'Quit'
cmd = sys.exit
else:
txt = 'Close'
cmd = self.close
texts = ['Refresh List', 'Select All', 'Install Selected', txt]
commands = [self.updateFiles, self.selectAll, self.install, cmd]
self.buttonList = ButtonList(guiParent,
texts=texts,
commands=commands,
expands=True)
self.buttonList.grid(row=3, column=0, columnspan=2, sticky='ew')
if self.server:
for fileUpdate in self.server.fileUpdates:
fileUpdate.isSelected = False
#self.update()
# need self.updateFiles, not just self.update
# because otherwise the 2.0.5 to 2.0.6 upgrades do not work
# (self.server not set on first pass so need call to updateFiles here)
self.updateFiles()
def body(self, master):
self.geometry('600x130')
master.grid_columnconfigure(1, weight=1)
for n in range(5):
master.grid_rowconfigure(n, weight=1)
row = 0
label = Label(master, text='Spectrum: ')
label.grid(row=row, column=0, sticky='e')
tipText = 'The spectrum for which the contour file is being added'
self.expt_spectrum = PulldownList(master,
callback=self.updateContourDir,
tipText=tipText)
self.expt_spectrum.grid(row=row, column=1, sticky='w')
row = row + 1
tipText = 'The location of the directory where contour files are stored on disk'
label = Label(master, text='Contour dir: ')
label.grid(row=row, column=0, sticky='e')
self.dir_label = Label(master, text='', tipText=tipText)
self.dir_label.grid(row=row, column=1, sticky='w')
row = row + 1
label = Label(
master,
text=
'(file will be copied into Contour dir if it is not already in there)'
)
label.grid(row=row, column=1, sticky='w')
row = row + 1
tipText = 'Browse for a file store contour data'
button = Button(master,
text='File name: ',
command=self.selectFile,
tipText=tipText)
button.grid(row=row, column=0, sticky='e')
tipText = 'Enter the name of the file to store contour data'
self.file_entry = Entry(master, tipText=tipText)
self.file_entry.grid(row=row, column=1, sticky='ew')
row = row + 1
texts = ['Add File']
commands = [self.addFile]
tipTexts = [
'Use the selected contour file in the current project, copying it to the contour directory if required',
]
self.buttons = UtilityButtonList(master,
texts=texts,
doClone=False,
tipTexts=tipTexts,
commands=commands,
helpUrl=self.help_url)
self.buttons.grid(row=row, column=0, columnspan=2, sticky='ew')
self.curateNotifiers(self.registerNotify)
self.updateSpectrum()
def body(self, guiFrame):
self.geometry('600x250+600+250')
analysisProfile = self.analysisProfile
userName = analysisProfile.userName
userOrganisation = analysisProfile.userOrganisation
userEmail = analysisProfile.userEmail
guiFrame.grid_rowconfigure(0, weight=1)
guiFrame.grid_columnconfigure(1, weight=1)
explainText = 'To keep track of our users and which versions are being used\n' \
'we would like you to register your details with us.\n' \
'Collating the number of users is important for grant applications.\n' \
'Please do not use accents in any of the information\n' \
'because Python does not handle it gracefully.'
row = 0
label = Label(guiFrame,
text=explainText,
grid=(row, 0),
gridSpan=(1, 2),
sticky='ew')
row += 1
licenseAgreeText = 'I agree to abide by the rules of the CCPN licensing agreement.'
self.agreeButton = CheckButton(guiFrame,
licenseAgreeText,
tipText=licenseAgreeText)
self.agreeButton.grid(row=row, column=1, columnspan=1, sticky='nsew')
row += 1
self.entryWidgets = []
for (text, value) in (('Name', userName),
('Organisation', userOrganisation), ('Email',
userEmail)):
label = Label(guiFrame, text=text + ':', grid=(row, 0))
entry = Entry(guiFrame,
text=value or '',
grid=(row, 1),
sticky='ew',
tipText='Your ' + text)
self.entryWidgets.append(entry)
row += 1
texts = ['Register Now', 'Read License', 'Register Later']
tipTexts = ['Register now', 'Read License', 'Register later']
commands = [self.register, self.openLicense, self.close]
buttons = UtilityButtonList(guiFrame,
helpUrl=self.help_url,
grid=(row, 0),
gridSpan=(1, 2),
commands=commands,
texts=texts,
tipTexts=tipTexts)
self.buttons = buttons
def body(self, guiParent):
self.geometry('320x120')
analysisProject = self.analysisProject
guiParent.expandGrid(5,3)
guiParent.expandGrid(5,4)
row = 0
div = LabelDivider(guiParent, text='Multi-dimensional Marks',
grid=(row,0), gridSpan=(1,4))
buttons = UtilityButtonList(guiParent, doClone=False, helpUrl=self.help_url)
buttons.grid(row=row, column=4, sticky='w')
row += 1
label = Label(guiParent, text='Maximum marks: ', grid=(row,0))
values = range(1, self.maxAllowedMarks+1)
entries = [ str(x) for x in values]
value = analysisProject.maxMarks
tipText = 'Sets the maximum number of multi-dimensional cross-marks that the user can add to spectrum window displays'
self.marks_menu = PulldownList(guiParent, callback=self.setMaxMarks, grid=(row,1),
texts=entries, objects=values,
index=value-1, tipText=tipText)
label = Label(guiParent, text=' Mark colour: ', grid=(row,2))
tipText = 'Sets the line colour of the multi-dimensional cross-marks, excepting those that go through peak centers'
self.marksSchemePulldown = PulldownList(guiParent, callback=self.setMarksColor,
grid=(row,3), tipText=tipText)
row += 1
label = Label(guiParent, text='(Non-peak marks only)', grid=(row,2), gridSpan=(1,2))
row += 1
div = LabelDivider(guiParent, text='1-dimensional Rulers',
grid=(row,0), gridSpan=(1,5))
row += 1
label = Label(guiParent, text='Maximum rulers: ', grid=(row,0))
values = range(1, self.maxAllowedRulers+1)
entries = [ str(x) for x in values]
value = analysisProject.maxRulers
tipText = 'Sets the maximum number of 1-dimensional ruler lines that the user can add to spectrum window displays'
self.rulers_menu = PulldownList(guiParent, callback=self.setMaxRulers, grid=(row,1),
texts=entries, objects=values, index=value-1, tipText=tipText)
label = Label(guiParent, text=' Ruler colour: ', grid=(row,2))
tipText = 'Sets the line colour of the 1-dimensional ruler lines'
self.rulersSchemePulldown = PulldownList(guiParent, callback=self.setRulersColor,
grid=(row,3), tipText=tipText)
self.updateSchemePulldowns()
def body(self, master):
#
# Popup window
#
self.widgets = []
row = 0
label = Label(master, text= "ChemComp formula '%s'" % self.formula)
label.grid(row=row, column=0, columnspan = 2, sticky=Tkinter.EW)
row = row + 1
label = Label(master, text= "Number of bonds: %d" % self.bondNumber)
label.grid(row=row, column=0, columnspan = 2, sticky=Tkinter.EW)
#
# Show relevant attributes...
#
for chemCompAttrInfo in self.chemCompInfo:
row = row + 1
attrName = chemCompAttrInfo[0]
label = Label(master, text = attrName)
label.grid(row=row, column=0, sticky=Tkinter.EW)
if attrName in self.nonEntryAttributes:
widgetInfo = self.nonEntryAttributes[attrName]
if widgetInfo[0] == PulldownMenu:
self.widgets.append(PulldownMenu(master, entries = widgetInfo[1], selected_index = widgetInfo[1].index(chemCompAttrInfo[1])))
elif widgetInfo[0] == CheckButton:
self.widgets.append(CheckButton(master, selected = widgetInfo[1]))
else:
text = chemCompAttrInfo[1]
if not text:
text = ''
self.widgets.append(Entry(master, text = text))
self.widgets[-1].grid(row=row, column=1, sticky=Tkinter.EW)
row = row + 1
texts = [ 'OK' ]
commands = [ self.ok ] # This calls 'ok' in BasePopup, this then calls 'apply' in here
buttons = createHelpButtonList(master, texts=texts, commands=commands, help_url=self.help_url)
buttons.grid(row=row, column=0, columnspan = 2)
def draw(self):
# there must be a better way of doing this. How does the garbage
# collector work ... do I have to formally remove widgets that
# I no longer intend to use or it is better to adopt a strategy
# of recyling them?
for child in self.children.values():
child.grid_remove()
#
# not clear whether this should come from an object under repList
# or from a simple variable in root. Probably best that there is
# a data struture that includes user and repList that is initialised
# on Login (or built from the readConfig method)
#
# really need to set up a dummy structure on login that we can build
# from if the user does not wish to log in
user_label = Label(self,
text="Currently Logged in as User: "******"Active repositories: ")
rep_label.grid(row=2, column=1, columnspan=2, pady=10, sticky='w')
# now rebuild. There must be a better way of doing this?
repRow = 3
# should maybe access through method?
for rep in self.basePopup.repList.getRepositories():
self.grid_rowconfigure(repRow, weight=0, minsize=10)
rep_name = Label(self, text=rep.name)
rep_name.grid(row=repRow, column=1, sticky='w')
rep_conn = Label(self, text=rep.connect)
rep_conn.grid(row=repRow, column=2, sticky='w')
if rep.type == None:
rep_type_text = 'not specified'
else:
rep_type_text = rep.type
rep_type = Label(self, text=rep_type_text)
rep_type.grid(row=repRow, column=3, sticky='w')
repRow += 1
self.grid_rowconfigure(repRow, weight=1, minsize=10)
def __init__(self, guiParent, basePopup):
# Base popup required to handle notification of data model changes
# e.g. new peak lists, so that the GUI can update to the latest
# state
self.basePopup = basePopup
self.guiParent = guiParent
self.registerNotify=basePopup.registerNotify
self.unregisterNotify=basePopup.unregisterNotify
Frame.__init__(self, guiParent)
# set up the grid
self.grid_columnconfigure(0, weight=1, minsize=10)
self.grid_columnconfigure(1, weight=0, minsize=10)
self.grid_columnconfigure(2, weight=0, minsize=20)
self.grid_columnconfigure(3, weight=1, minsize=10)
self.grid_rowconfigure(0, weight=1, minsize=5)
self.grid_rowconfigure(1, weight=0, minsize=10)
self.grid_rowconfigure(2, weight=0, minsize=10)
self.grid_rowconfigure(3, weight=0, minsize=10)
self.grid_rowconfigure(4, weight=1, minsize=5)
# build up the body.
# Column headers
self.user_label = Label(self,text='Username:'******'w')
self.user_value = Text(self, width=20, height=1, text="")
self.user_value.grid(row=1, column=2, padx=5, pady=5, sticky='w')
self.pswd_label = Label(self,text='Password:'******'w')
self.pswd_value = Text(self, width=20, height=1, text="")
self.pswd_value.grid(row=2, column=2, padx=5, pady=5, sticky='w')
self.cancel_button = Button(self, width=10, height=1,
text="Cancel",
command=self.quit )
self.cancel_button.grid(row=3, column=1, padx=5, pady=5, sticky='e')
self.login_botton = Button(self, width=10, height=1,
text="Login",
command=self.login )
self.login_botton.grid(row=3, column=2, padx=5, pady=5, sticky='w')
def body(self, guiParent):
guiParent.grid_columnconfigure(0, weight=1)
row = 0
guiParent.grid_rowconfigure(row, weight=1)
inputFrame = LabelFrame(guiParent, text='Inputs:')
inputFrame.grid(row=row, column=0, sticky=Tkinter.NSEW)
label = Label(inputFrame, text='NOESY:')
label.grid(row=0, column=0, sticky=Tkinter.NW)
self.hNoesyPulldown = PulldownMenu(inputFrame,callback=self.setHNoesy)
self.hNoesyPulldown.grid(row=0, column=1, sticky=Tkinter.NW)
label = Label(inputFrame, text='15N NOESY:')
label.grid(row=1, column=0, sticky=Tkinter.NW)
self.nNoesyPulldown = PulldownMenu(inputFrame,callback=self.setNNoesy)
self.nNoesyPulldown.grid(row=1, column=1, sticky=Tkinter.NW)
label = Label(inputFrame, text='13C NOESY:')
label.grid(row=2, column=0, sticky=Tkinter.NW)
self.cNoesyPulldown = PulldownMenu(inputFrame,callback=self.setCNoesy)
self.cNoesyPulldown.grid(row=2, column=1, sticky=Tkinter.NW)
label = Label(inputFrame, text='Shift List:')
label.grid(row=3, column=0, sticky=Tkinter.NW)
self.shiftListPulldown = PulldownMenu(inputFrame,callback=self.setShiftList)
self.shiftListPulldown.grid(row=3, column=1, sticky=Tkinter.NW)
label = Label(inputFrame, text='2d BACUS executable:')
label.grid(row=4, column=0, sticky=Tkinter.NW)
self.executableEntry = Entry(inputFrame, text='/home/tjs23/clouds/justin/SpiBacusMidge/bacus/bacus_tjs.exe')
self.executableEntry.grid(row=4, column=1, sticky=Tkinter.NW)
self.executableButton = Button(inputFrame, text='Choose file', command=self.chooseExecutable)
self.executableButton.grid(row=5, column=1, sticky=Tkinter.EW)
row += 1
outputFrame = LabelFrame(guiParent, text='Output:')
outputFrame.grid(row=row, column=0, sticky=Tkinter.NSEW)
row += 1
texts = ['Run BACUS 2d','Run BACUS 3d']
commands = [self.runBacus,self.runBacus3d]
self.bottomButtons = createDismissHelpButtonList(guiParent,texts=texts,commands=commands,expands=0,help_url=None)
self.bottomButtons.grid(row=row, column=0, sticky=Tkinter.EW)
self.update()
def __init__(self, guiParent, dataText, dataObjects, dataValues, helpText,
selectionText, **kw):
Frame.__init__(self, guiParent, **kw)
label = Label(self, text=dataText + ':', grid=(0, 0))
self.selectionList = PulldownList(self,
objects=dataObjects,
texts=dataValues,
grid=(0, 1))
label = Label(self, text=helpText, grid=(1, 0), gridSpan=(1, 2))
label = Label(self, text=selectionText + ':', grid=(2, 0))
self.selectionEntry = Entry(self, grid=(2, 1))
def changeTabs():
tabbedFrame.setTabs(['Option 1', 'Option 2', 'Option 3'])
frames = tabbedFrame.frames
l1 = Label(frames[0], text='Totally new frame 1')
l1.grid()
l2 = Label(frames[1], text='Totally new frame 2')
l2.grid()
l3 = Label(frames[2], text='Totally new frame 3')
l3.grid()
def __init__(self, guiParent, basePopup, borderRelief='raised', text=' ', justify='left',
width=None, font=None, height=None, *args, **kw):
# Base popup required to handle notification of data model changes
# e.g. new peak lists, so that the GUI can update to the latest
# state
self.basePopup = basePopup
self.guiParent = guiParent
self.borderRelief = borderRelief
self.text = text
self.justify = justify
self.width = width
self.font = font
self.height = height
self.registerNotify=basePopup.registerNotify
self.unregisterNotify=basePopup.unregisterNotify
LabelFrame.__init__(self, guiParent, borderRelief, text, justify,
width, font, height, *args, **kw)
# set up the grid
self.grid_columnconfigure(0, weight=0, minsize=20)
self.grid_rowconfigure(0, weight=0, minsize=5)
self.grid_rowconfigure(1, weight=0, minsize=10)
self.grid_rowconfigure(2, weight=0, minsize=10)
self.grid_rowconfigure(3, weight=0, minsize=10)
# build up the body.
self.nameLabel = Label(self,text='Name:')
self.nameLabel.grid(row=1, column=0, padx=2, sticky='nw')
self.nameText = Text(self, width=15, height=1)
self.nameText.grid(row=1, column=1, sticky='nw')
self.userLabel = Label(self,text='User:'******'nw')
self.userText = Text(self, width=15, height=1)
self.userText.grid(row=2, column=1, sticky='nw')
self.clearButton = Button(self, text='Clear', command=self.clear_filter, width=7, height=1)
self.clearButton.grid(row=3, column=0, columnspan=2, sticky='nw')
self.filterButton = Button(self, text='Go', command=self.tmpCall, width=7, height=1)
self.filterButton.grid(row=3, column=1, columnspan=2, sticky='ne')
def body(self, master):
#
# Popup window
#
row = 0
label = Label(master, text=self.topText)
label.grid(row=row, column=0, columnspan=2, sticky=Tkinter.EW)
row = row + 1
self.valueWidgets = []
for i in range(0, len(self.valueList)):
value = self.valueList[i]
labelText = self.valueInfo[i]
label = Label(master, text=labelText)
label.grid(row=row, column=0, sticky=Tkinter.EW)
self.valueWidgets.append(Entry(master, text=str(value)))
self.valueWidgets[-1].grid(row=row,
column=1,
sticky=Tkinter.E,
ipadx=20)
row = row + 1
texts = ['OK']
commands = [
self.ok
] # This calls 'ok' in BasePopup, this then calls 'apply' in here
if self.dismissButton:
buttons = createDismissHelpButtonList(
master,
texts=texts,
commands=commands,
dismiss_text=self.dismissText,
help_url=self.help_url)
else:
buttons = createHelpButtonList(master,
texts=texts,
commands=commands,
help_url=self.help_url)
buttons.grid(row=row, column=0, columnspan=3)
def body(self, guiParent):
guiParent.grid_columnconfigure(1,weight=1)
row = 0
file_types = [ FileType('Python', ['*.py']), FileType('All', ['*']) ]
self.file_select = FileSelect(guiParent, file_types=file_types,
single_callback=self.chooseFile,
double_callback=self.chooseFile)
self.file_select.grid(row=row, column=0, columnspan=2, sticky='nsew')
row = row + 1
headingList=('Function',)
self.scrolledMatrix = ScrolledMatrix(guiParent, initialRows=4,
headingList=headingList, callback=self.selectFunction)
self.scrolledMatrix.grid(row=row, column=0, columnspan=2, sticky='nsew')
guiParent.grid_rowconfigure(row,weight=1)
row = row + 1
self.moduleLabel1 = Label(guiParent, text='Module: ')
self.moduleLabel1.grid(row=row, column=0, sticky='nw')
self.moduleLabel2 = Label(guiParent, text=' ')
self.moduleLabel2.grid(row=row, column=1, sticky='nw')
row = row + 1
self.functionLabel1 = Label(guiParent, text='Function: ')
self.functionLabel1.grid(row=row, column=0, sticky='nw')
self.functionLabel2 = Label(guiParent, text=' ')
self.functionLabel2.grid(row=row, column=1, sticky='nw')
row = row + 1
self.nameLabel = Label(guiParent, text='Name: ')
self.nameLabel.grid(row=row, column=0, sticky='nw')
self.nameEntry = Entry(guiParent, text=' ', width=40)
self.nameEntry.grid(row=row, column=1, sticky='nw')
row = row + 1
texts = [ 'Load Macro' ]
commands = [ self.loadMacro ]
buttons = UtilityButtonList(guiParent, texts=texts,
commands=commands, helpUrl=self.help_url)
buttons.grid(row=row, column=0, columnspan=2, sticky='ew')
self.loadButton = buttons.buttons[0]
self.loadButton.disable()
self.path = None
self.module = None
self.function = None
def body(self, master):
row = 0
label = Label(master,
text="BMRB chemical shift deposition file writer.")
label.grid(row=row, column=0, columnspan=2, sticky=Tkinter.W)
row += 1
label = Label(master, text="Shift lists:")
label.grid(row=row, column=0, sticky=Tkinter.W)
self.shiftListSelect = PulldownMenu(master,
entries=self.shiftLists,
callback=self.setChainList,
do_initial_callback=False)
self.shiftListSelect.grid(row=row, column=1, sticky=Tkinter.EW)
row += 1
label = Label(master, text="Chains (only one per file):")
label.grid(row=row, column=0, sticky=Tkinter.W)
self.chainListSelect = PulldownMenu(master, entries=self.chainList)
self.chainListSelect.grid(row=row, column=1, sticky=Tkinter.EW)
self.setChainList(0, self.shiftLists[0])
row += 1
label = Label(master, text="Chemical shift deposition file:")
label.grid(row=row, column=0, sticky=Tkinter.W)
self.fileButton = Tkinter.Button(master,
text=self.defaultText,
command=self.selectFile)
self.fileButton.grid(row=row, column=1, sticky=Tkinter.W)
row += 1
texts = ['Write file']
commands = [
self.ok
] # This calls 'ok' in BasePopup, this then calls 'apply' in here
buttons = createDismissHelpButtonList(master,
texts=texts,
commands=commands,
help_url=self.help_url)
buttons.grid(row=row, columnspan=2, column=0)
