def computation_fn():
graph = mtf.Graph()
mesh = mtf.Mesh(graph, 'my_mesh')
mesh_shape = mtf.convert_to_shape('all:2')
layout = 'none:all'
mesh_devices = [''] * mesh_shape.size
mesh_impl = mtf.simd_mesh_impl.SimdMeshImpl(
mesh_shape, mtf.convert_to_layout_rules(layout),
mesh_devices, device_assignment)
hidden_dim = mtf.Dimension('hidden', 3)
w = mtf.get_variable(mesh,
'w',
shape=[hidden_dim],
initializer=tf.constant_initializer(
[0.1, -0.2, -0.1]))
x = mtf.constant(mesh, [0.4, 0.2, -0.5], [hidden_dim],
dtype=tf.float32)
loss = mtf.reduce_mean(mtf.square(x - w))
lr, update_ops = optimization_lib.create_optimizer(
loss, 0.2, 100, 10)
self.lowering = mtf.Lowering(graph, {mesh: mesh_impl})
tf_update_ops = [
self.lowering.lowered_operation(op) for op in update_ops
]
tf_update_ops.append(
tf.assign_add(tf.train.get_or_create_global_step(), 1))
train_op = tf.group(tf_update_ops)
return lr, train_op
def model_fn(features, labels, mode, params): # pylint: disable=unused-argument
"""The `model_fn` for TPUEstimator."""
tf.logging.info("*** Features ***")
for name in sorted(features.keys()):
tf.logging.info(" name = %s, shape = %s" %
(name, features[name].shape))
# MTF setup.
graph = mtf.Graph()
mesh_shape = mtf.convert_to_shape(FLAGS.mesh_shape)
layout_rules = mtf.convert_to_layout_rules(FLAGS.layout)
ctx = params["context"]
num_hosts = ctx.num_hosts
host_placement_fn = ctx.tpu_host_placement_function
device_list = [host_placement_fn(host_id=t) for t in range(num_hosts)]
tf.logging.info("device_list = %s" % device_list, )
replica_cache_size = 300 * 1000000 # 300M per replica
# Worker 0 caches all the TPU binaries.
worker0_mem = replica_cache_size * ctx.num_replicas
devices_memeory_usage = [worker0_mem] + [0] * (num_hosts - 1)
var_placer = mtf.utils.BalancedVariablePlacer(device_list,
devices_memeory_usage)
mesh_devices = [""] * mesh_shape.size
physical_shape = list(ctx.device_assignment.topology.mesh_shape)
logical_to_physical = mtf.simd_mesh_impl.auto_logical_to_physical_tpu(
mesh_shape.to_integer_list, physical_shape)
mesh_impl = mtf.simd_mesh_impl.SimdMeshImpl(
mesh_shape,
layout_rules,
mesh_devices,
ctx.device_assignment,
logical_to_physical=logical_to_physical)
mesh = mtf.Mesh(graph, "bert_mesh", var_placer)
input_ids = features["input_ids"]
input_mask = features["input_mask"]
segment_ids = features["segment_ids"]
masked_lm_positions = features["masked_lm_positions"]
masked_lm_ids = features["masked_lm_ids"]
masked_lm_weights = features["masked_lm_weights"]
next_sentence_labels = tf.squeeze(features["next_sentence_labels"], 1)
batch_size = input_ids.get_shape()[0].value
batch_dim = mtf.Dimension("batch", batch_size)
seq_length = input_ids.get_shape()[1].value
seq_dim = mtf.Dimension("seq", seq_length)
max_predictions_per_seq = masked_lm_positions.get_shape()[1].value
max_predictions_per_seq_dim = mtf.Dimension("max_pred_seq",
max_predictions_per_seq)
mtf_input_ids = mtf.import_tf_tensor(mesh, input_ids,
[batch_dim, seq_dim])
mtf_input_mask = mtf.import_tf_tensor(mesh, input_mask,
[batch_dim, seq_dim])
mtf_segment_ids = mtf.import_tf_tensor(mesh, segment_ids,
[batch_dim, seq_dim])
mtf_masked_lm_positions = mtf.import_tf_tensor(
mesh, masked_lm_positions,
[batch_dim, max_predictions_per_seq_dim])
mtf_masked_lm_ids = mtf.import_tf_tensor(
mesh, masked_lm_ids, [batch_dim, max_predictions_per_seq_dim])
mtf_masked_lm_weights = mtf.import_tf_tensor(
mesh, masked_lm_weights, [batch_dim, max_predictions_per_seq_dim])
mtf_next_sentence_labels = mtf.import_tf_tensor(
mesh, next_sentence_labels, [batch_dim])
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
model = bert_lib.BertModel(config=bert_config,
is_training=is_training,
input_ids=mtf_input_ids,
input_mask=mtf_input_mask,
token_type_ids=mtf_segment_ids,
layout=layout_rules,
mesh_shape=mesh_shape)
(masked_lm_loss, masked_lm_example_loss,
masked_lm_logits) = model.get_masked_lm_output(
mtf_masked_lm_positions, mtf_masked_lm_ids, mtf_masked_lm_weights)
(next_sentence_loss, next_sentence_example_loss, next_sentence_logits
) = model.get_next_sentence_output(mtf_next_sentence_labels)
extra_loss = model.get_extra_loss()
total_loss = masked_lm_loss + next_sentence_loss
total_loss = mtf.anonymize(total_loss)
masked_lm_example_loss = mtf.anonymize(masked_lm_example_loss)
masked_lm_logits = mtf.anonymize(masked_lm_logits)
next_sentence_example_loss = mtf.anonymize(next_sentence_example_loss)
next_sentence_logits = mtf.anonymize(next_sentence_logits)
# TRAIN mode
if mode == tf.estimator.ModeKeys.TRAIN:
_, update_ops = optimization_lib.create_optimizer(
total_loss + extra_loss,
learning_rate,
num_train_steps,
num_warmup_steps,
optimizer=FLAGS.optimizer,
clip_gradients=FLAGS.clip_gradients)
lowering = mtf.Lowering(graph, {mesh: mesh_impl})
tf_loss = tf.to_float(lowering.export_to_tf_tensor(total_loss))
if mode == tf.estimator.ModeKeys.TRAIN:
global_step = tf.train.get_global_step()
tf_update_ops = [
lowering.lowered_operation(op) for op in update_ops
]
tf_update_ops.append(tf.assign_add(global_step, 1))
tf.logging.info("tf_update_ops: {}".format(tf_update_ops))
train_op = tf.group(tf_update_ops)
elif mode == tf.estimator.ModeKeys.EVAL:
def metric_fn(masked_lm_example_loss, masked_lm_logits,
masked_lm_ids, masked_lm_weights,
next_sentence_example_loss, next_sentence_logits,
next_sentence_labels):
"""Computes the loss and accuracy of the model."""
masked_lm_logits = tf.reshape(masked_lm_logits,
[-1, masked_lm_logits.shape[-1]])
masked_lm_predictions = tf.argmax(masked_lm_logits,
axis=-1,
output_type=tf.int32)
masked_lm_example_loss = tf.reshape(masked_lm_example_loss,
[-1])
masked_lm_ids = tf.reshape(masked_lm_ids, [-1])
masked_lm_weights = tf.reshape(masked_lm_weights, [-1])
masked_lm_accuracy = tf.metrics.accuracy(
labels=masked_lm_ids,
predictions=masked_lm_predictions,
weights=masked_lm_weights)
masked_lm_mean_loss = tf.metrics.mean(
values=masked_lm_example_loss, weights=masked_lm_weights)
next_sentence_logits = tf.reshape(
next_sentence_logits, [-1, next_sentence_logits.shape[-1]])
next_sentence_predictions = tf.argmax(next_sentence_logits,
axis=-1,
output_type=tf.int32)
next_sentence_labels = tf.reshape(next_sentence_labels, [-1])
next_sentence_accuracy = tf.metrics.accuracy(
labels=next_sentence_labels,
predictions=next_sentence_predictions)
next_sentence_mean_loss = tf.metrics.mean(
values=next_sentence_example_loss)
return {
"masked_lm_accuracy": masked_lm_accuracy,
"masked_lm_loss": masked_lm_mean_loss,
"next_sentence_accuracy": next_sentence_accuracy,
"next_sentence_loss": next_sentence_mean_loss,
}
eval_metrics = (metric_fn, [
lowering.export_to_tf_tensor(masked_lm_example_loss),
lowering.export_to_tf_tensor(masked_lm_logits), masked_lm_ids,
masked_lm_weights,
lowering.export_to_tf_tensor(next_sentence_example_loss),
lowering.export_to_tf_tensor(next_sentence_logits),
next_sentence_labels
])
with mtf.utils.outside_all_rewrites():
# Copy master variables to slices. Must be called first.
restore_hook = mtf.MtfRestoreHook(lowering)
if mode == tf.estimator.ModeKeys.TRAIN:
saver = tf.train.Saver(tf.global_variables(),
sharded=True,
max_to_keep=10,
keep_checkpoint_every_n_hours=2,
defer_build=False,
save_relative_paths=True)
tf.add_to_collection(tf.GraphKeys.SAVERS, saver)
saver_listener = mtf.MtfCheckpointSaverListener(lowering)
saver_hook = tf.train.CheckpointSaverHook(
FLAGS.output_dir,
save_steps=1000,
saver=saver,
listeners=[saver_listener])
return tf.estimator.tpu.TPUEstimatorSpec(
tf.estimator.ModeKeys.TRAIN,
loss=tf_loss,
train_op=train_op,
training_hooks=[restore_hook, saver_hook])
elif mode == tf.estimator.ModeKeys.EVAL:
return tf.estimator.tpu.TPUEstimatorSpec(
tf.estimator.ModeKeys.EVAL,
evaluation_hooks=[restore_hook],
loss=tf_loss,
eval_metrics=eval_metrics)
def model_fn(features, labels, mode, params): # pylint: disable=unused-argument
"""The `model_fn` for TPUEstimator."""
tf.logging.info("*** Features ***")
for name in sorted(features.keys()):
tf.logging.info(" name = %s, shape = %s" %
(name, features[name].shape))
# MTF setup.
graph = mtf.Graph()
mesh_shape = mtf.convert_to_shape(FLAGS.mesh_shape)
layout_rules = mtf.convert_to_layout_rules(FLAGS.layout)
ctx = params["context"]
num_hosts = ctx.num_hosts
host_placement_fn = ctx.tpu_host_placement_function
device_list = [host_placement_fn(host_id=t) for t in range(num_hosts)]
tf.logging.info("device_list = %s" % device_list, )
replica_cache_size = 300 * 1000000 # 300M per replica
# Worker 0 caches all the TPU binaries.
worker0_mem = replica_cache_size * ctx.num_replicas
devices_memeory_usage = [worker0_mem] + [0] * (num_hosts - 1)
var_placer = mtf.utils.BalancedVariablePlacer(device_list,
devices_memeory_usage)
mesh_devices = [""] * mesh_shape.size
mesh_impl = mtf.simd_mesh_impl.SimdMeshImpl(mesh_shape, layout_rules,
mesh_devices,
ctx.device_assignment)
mesh = mtf.Mesh(graph, "bert_mesh", var_placer)
input_ids = features["input_ids"]
input_mask = features["input_mask"]
segment_ids = features["segment_ids"]
label_ids = features["label_ids"]
is_real_example = None
if "is_real_example" in features:
is_real_example = tf.cast(features["is_real_example"],
dtype=tf.float32)
else:
is_real_example = tf.ones(tf.shape(label_ids), dtype=tf.float32)
batch_size = input_ids.get_shape()[0].value
batch_dim = mtf.Dimension("batch", batch_size)
seq_length = input_ids.get_shape()[1].value
seq_dim = mtf.Dimension("seq", seq_length)
num_labels_dim = mtf.Dimension("seq", num_labels)
mtf_input_ids = mtf.import_tf_tensor(mesh, input_ids,
[batch_dim, seq_dim])
mtf_input_mask = mtf.import_tf_tensor(mesh, input_mask,
[batch_dim, seq_dim])
mtf_segment_ids = mtf.import_tf_tensor(mesh, segment_ids,
[batch_dim, seq_dim])
mtf_label_ids = mtf.import_tf_tensor(mesh, label_ids, [batch_dim])
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
(total_loss, per_example_loss, logits,
probabilities) = create_model(bert_config, is_training, mtf_input_ids,
mtf_input_mask, mtf_segment_ids,
mtf_label_ids, num_labels_dim,
layout_rules, mesh_shape)
total_loss = mtf.anonymize(total_loss)
per_example_loss = mtf.anonymize(per_example_loss)
logits = mtf.anonymize(logits)
if mode == tf.estimator.ModeKeys.TRAIN:
_, update_ops = optimization_lib.create_optimizer(
total_loss,
learning_rate,
num_train_steps,
num_warmup_steps,
max_optimized_variable_size=FLAGS.max_optimized_variable_size,
optimizer=FLAGS.optimizer,
clip_gradients=FLAGS.clip_gradients)
lowering = mtf.Lowering(graph, {mesh: mesh_impl})
tf_loss = tf.to_float(lowering.export_to_tf_tensor(total_loss))
if mode == tf.estimator.ModeKeys.TRAIN:
global_step = tf.train.get_global_step()
tf_update_ops = [
lowering.lowered_operation(op) for op in update_ops
]
tf_update_ops.append(tf.assign_add(global_step, 1))
tf.logging.info("tf_update_ops: {}".format(tf_update_ops))
train_op = tf.group(tf_update_ops)
elif mode == tf.estimator.ModeKeys.EVAL:
def metric_fn(per_example_loss, label_ids, logits,
is_real_example):
predictions = tf.argmax(logits, axis=-1, output_type=tf.int32)
accuracy = tf.metrics.accuracy(labels=label_ids,
predictions=predictions,
weights=is_real_example)
loss = tf.metrics.mean(values=per_example_loss,
weights=is_real_example)
return {
"eval_accuracy": accuracy,
"eval_loss": loss,
}
eval_metrics = (metric_fn, [
lowering.export_to_tf_tensor(per_example_loss), label_ids,
lowering.export_to_tf_tensor(logits), is_real_example
])
tvars = tf.trainable_variables()
initialized_variable_names = {}
scaffold_fn = None
if init_checkpoint:
(assignment_map, initialized_variable_names
) = bert_lib.get_assignment_map_from_checkpoint(
tvars, init_checkpoint)
if use_tpu:
def tpu_scaffold():
tf.train.init_from_checkpoint(init_checkpoint,
assignment_map)
return tf.train.Scaffold()
scaffold_fn = tpu_scaffold
else:
tf.train.init_from_checkpoint(init_checkpoint, assignment_map)
tf.logging.info("**** Trainable Variables ****")
for var in tvars:
init_string = ""
if var.name in initialized_variable_names:
init_string = ", *INIT_FROM_CKPT*"
tf.logging.info(" name = %s, shape = %s%s", var.name, var.shape,
init_string)
with mtf.utils.outside_all_rewrites():
# Copy master variables to slices. Must be called first.
restore_hook = mtf.MtfRestoreHook(lowering)
if mode == tf.estimator.ModeKeys.TRAIN:
saver = tf.train.Saver(tf.global_variables(),
sharded=True,
max_to_keep=10,
keep_checkpoint_every_n_hours=2,
defer_build=False,
save_relative_paths=True)
tf.add_to_collection(tf.GraphKeys.SAVERS, saver)
saver_listener = mtf.MtfCheckpointSaverListener(lowering)
saver_hook = tf.train.CheckpointSaverHook(
FLAGS.output_dir,
save_steps=1000,
saver=saver,
listeners=[saver_listener])
return tf.estimator.tpu.TPUEstimatorSpec(
mode,
loss=tf_loss,
train_op=train_op,
training_hooks=[restore_hook, saver_hook],
scaffold_fn=scaffold_fn)
elif mode == tf.estimator.ModeKeys.EVAL:
return tf.estimator.tpu.TPUEstimatorSpec(
mode,
evaluation_hooks=[restore_hook],
loss=tf_loss,
eval_metrics=eval_metrics,
scaffold_fn=scaffold_fn)
else:
return tf.estimator.tpu.TPUEstimatorSpec(
mode,
prediction_hooks=[restore_hook],
predictions={
"probabilities":
lowering.export_to_tf_tensor(probabilities)
},
scaffold_fn=scaffold_fn)
def model_fn(features, labels, mode, params): # pylint: disable=unused-argument
"""The `model_fn` for TPUEstimator."""
tf.logging.info("*** Features ***")
for name in sorted(features.keys()):
tf.logging.info(" name = %s, shape = %s" % (name, features[name].shape))
# MTF setup.
graph = mtf.Graph()
mesh_shape = mtf.convert_to_shape(FLAGS.mesh_shape)
layout_rules = mtf.convert_to_layout_rules(FLAGS.layout)
ctx = params["context"]
num_hosts = ctx.num_hosts
host_placement_fn = ctx.tpu_host_placement_function
device_list = [host_placement_fn(host_id=t) for t in range(num_hosts)]
tf.logging.info("device_list = %s" % device_list,)
replica_cache_size = 300 * 1000000 # 300M per replica
# Worker 0 caches all the TPU binaries.
worker0_mem = replica_cache_size * ctx.num_replicas
devices_memeory_usage = [worker0_mem] + [0] * (num_hosts - 1)
var_placer = mtf.utils.BalancedVariablePlacer(device_list,
devices_memeory_usage)
mesh_devices = [""] * mesh_shape.size
mesh_impl = mtf.simd_mesh_impl.SimdMeshImpl(mesh_shape, layout_rules,
mesh_devices,
ctx.device_assignment)
mesh = mtf.Mesh(graph, "bert_mesh", var_placer)
unique_ids = features["unique_ids"]
input_ids = features["input_ids"]
input_mask = features["input_mask"]
segment_ids = features["segment_ids"]
batch_size = input_ids.get_shape()[0].value
batch_dim = mtf.Dimension("batch", batch_size)
seq_length = input_ids.get_shape()[1].value
seq_dim = mtf.Dimension("seq", seq_length)
mtf_input_ids = mtf.import_tf_tensor(mesh, input_ids, [batch_dim, seq_dim])
mtf_input_mask = mtf.import_tf_tensor(mesh, input_mask,
[batch_dim, seq_dim])
mtf_segment_ids = mtf.import_tf_tensor(mesh, segment_ids,
[batch_dim, seq_dim])
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
(start_logits, end_logits) = create_model(
bert_config=bert_config,
is_training=is_training,
input_ids=mtf_input_ids,
input_mask=mtf_input_mask,
segment_ids=mtf_segment_ids)
if mode == tf.estimator.ModeKeys.TRAIN:
def compute_loss(logits, positions):
one_hot_positions = mtf.one_hot(positions, output_dim=seq_dim)
log_probs = mtf.log_softmax(logits, seq_dim)
loss = -mtf.reduce_mean(
mtf.reduce_sum(one_hot_positions * log_probs, reduced_dim=seq_dim))
return loss
start_positions = features["start_positions"]
mtf_start_positions = mtf.import_tf_tensor(mesh, start_positions,
[batch_dim])
end_positions = features["end_positions"]
mtf_end_positions = mtf.import_tf_tensor(mesh, end_positions, [batch_dim])
start_loss = compute_loss(start_logits, mtf_start_positions)
end_loss = compute_loss(end_logits, mtf_end_positions)
total_loss = (start_loss + end_loss) / 2.0
_, update_ops = optimization_lib.create_optimizer(
total_loss,
learning_rate,
num_train_steps,
num_warmup_steps,
max_optimized_variable_size=FLAGS.max_optimized_variable_size,
optimizer=FLAGS.optimizer,
clip_gradients=FLAGS.clip_gradients)
elif mode == tf.estimator.ModeKeys.PREDICT:
start_logits = mtf.anonymize(start_logits)
end_logits = mtf.anonymize(end_logits)
lowering = mtf.Lowering(graph, {mesh: mesh_impl})
if mode == tf.estimator.ModeKeys.TRAIN:
tf_loss = tf.to_float(lowering.export_to_tf_tensor(total_loss))
global_step = tf.train.get_global_step()
tf_update_ops = [lowering.lowered_operation(op) for op in update_ops]
tf_update_ops.append(tf.assign_add(global_step, 1))
tf.logging.info("tf_update_ops: {}".format(tf_update_ops))
train_op = tf.group(tf_update_ops)
tvars = tf.trainable_variables()
initialized_variable_names = {}
scaffold_fn = None
if init_checkpoint:
(assignment_map, initialized_variable_names
) = bert_lib.get_assignment_map_from_checkpoint(tvars, init_checkpoint)
if use_tpu:
def tpu_scaffold():
tf.train.init_from_checkpoint(init_checkpoint, assignment_map)
return tf.train.Scaffold()
scaffold_fn = tpu_scaffold
else:
tf.train.init_from_checkpoint(init_checkpoint, assignment_map)
tf.logging.info("**** Trainable Variables ****")
for var in tvars:
init_string = ""
if var.name in initialized_variable_names:
init_string = ", *INIT_FROM_CKPT*"
tf.logging.info(" name = %s, shape = %s%s", var.name, var.shape,
init_string)
with mtf.utils.outside_all_rewrites():
# Copy master variables to slices. Must be called first.
restore_hook = mtf.MtfRestoreHook(lowering)
if mode == tf.estimator.ModeKeys.TRAIN:
saver = tf.train.Saver(
tf.global_variables(),
sharded=True,
max_to_keep=10,
keep_checkpoint_every_n_hours=2,
defer_build=False,
save_relative_paths=True)
tf.add_to_collection(tf.GraphKeys.SAVERS, saver)
saver_listener = mtf.MtfCheckpointSaverListener(lowering)
saver_hook = tf.train.CheckpointSaverHook(
FLAGS.output_dir,
save_steps=1000,
saver=saver,
listeners=[saver_listener])
return tf.estimator.tpu.TPUEstimatorSpec(
mode,
loss=tf_loss,
train_op=train_op,
training_hooks=[restore_hook, saver_hook],
scaffold_fn=scaffold_fn)
elif mode == tf.estimator.ModeKeys.PREDICT:
predictions = {
"unique_ids": unique_ids,
"start_logits": lowering.export_to_tf_tensor(start_logits),
"end_logits": lowering.export_to_tf_tensor(end_logits),
}
return tf.estimator.tpu.TPUEstimatorSpec(
mode,
prediction_hooks=[restore_hook],
predictions=predictions,
scaffold_fn=scaffold_fn)
else:
raise ValueError("Only TRAIN and PREDICT modes are supported: %s" %
(mode))
