def plotdeltaphase(fname, k):
d = genplotlib.gendict_phase(fname, 'deltaphase')
print(d)
plt.figure()
genplotlib.plot_phaseplot(d, k, 'no', 'Phase')
plt.savefig('deltaphase_r1')
def plotdeltaphase(fname, k):
d = genplotlib.gendict_phase(fname, 'deltaphase')
print(d)
plt.figure()
genplotlib.plot_phaseplot(d, k, 'no', 'Phase')
plt.savefig('deltaphase_r1')
def plotdeltatime(fname, k):
d = genplotlib.gendict_phase(fname, 'deltatime')
md = genplotlib.genlist(d)
n = []
for i, v in d.iteritems():
n.append(max(v))
print(n)
plt.figure()
genplotlib.plotdata(d,
md,
k,
's',
'Delay (seconds)',
'Time delay',
ymin=0.05,
ylim=(max(n) + 0.1 * max(n)))
plt.savefig('deltatime_summ')
plt.figure()
genplotlib.plotdata(d,
md,
k,
'b',
'Delay (seconds)',
'Time delay',
ymin=0.05,
ylim=(max(n) + 0.1 * max(n)))
plt.savefig('deltatime_summ_bar')
def plotdeltaframe(fname, k):
d = genplotlib.gendict_phase(fname, 'deltaframe')
md = genplotlib.genlist(d)
n = []
for i, v in d.iteritems():
n.append(max(v))
print(n)
plt.figure()
genplotlib.plotdata(d,
md,
k,
's',
'Delay (frames)',
'Frame delay',
ymin=0,
ylim=max(n) + 5)
plt.savefig('deltaframe_summ')
plt.figure()
genplotlib.plotdata(d,
md,
k,
'b',
'Delay (frames)',
'Frame delay',
ymin=0,
ylim=max(n) + 5)
plt.savefig('deltaframe_summ_bar')
def plotphaselen(fname, K):
"""Plots and saves the phase vs. length of phase vector; run from the 'summary' folder."""
d = genplotlib.gendict_phase(fname, 'dp_freq')
plt.figure()
ad = genavgphaselendict(d)
print(ad)
genplotlib.plot_phaseplot_l(ad, K, 'no', 'Average phase', withn='no')
aname = 'deltaphasevsphaselen_avg'
plt.savefig(aname)
def plotphaselen(fname, K):
"""Plots and saves the phase vs. length of phase vector; run from the 'summary' folder."""
d = genplotlib.gendict_phase(fname, 'dp_freq')
plt.figure()
ad = genavgphaselendict(d)
print(ad)
genplotlib.plot_phaseplot_l(ad, K, 'no', 'Average phase', withn='no')
aname = 'deltaphasevsphaselen_avg'
plt.savefig(aname)
def plotphasenlpersec(fname, K):
"""Plots and saves the phase vs. nlpersec plots; run from the 'summary' folder."""
d = genplotlib.gendict_phase(fname, 'dp_freq')
plt.figure()
genplotlib.plot_phaseplot_lpf(d, K, 'no', 'Phase vs. volume drunk')
pname = 'deltaphasevsvol'
plt.savefig(pname)
plt.figure()
ad = genavgphasefreqdict(d)
print(ad)
genplotlib.plot_phaseplot_lpf(ad, K, 'no', 'Average phase vs. average volume', withn='no')
aname = 'deltaphasevsfreq_avg'
plt.savefig(aname)
def plotdeltaframe(fname, k):
d = genplotlib.gendict_phase(fname, 'deltaframe')
md = genplotlib.genlist(d)
n = []
for i, v in d.iteritems():
n.append(max(v))
print(n)
plt.figure()
genplotlib.plotdata(d, md, k, 's', 'Delay (frames)', 'Frame delay', ymin=0, ylim=max(n)+5)
plt.savefig('deltaframe_summ')
plt.figure()
genplotlib.plotdata(d, md, k, 'b', 'Delay (frames)', 'Frame delay', ymin=0, ylim=max(n)+5)
plt.savefig('deltaframe_summ_bar')
def plotdeltatime(fname, k):
d = genplotlib.gendict_phase(fname, 'deltatime')
md = genplotlib.genlist(d)
n = []
for i, v in d.iteritems():
n.append(max(v))
print(n)
plt.figure()
genplotlib.plotdata(d, md, k, 's', 'Delay (seconds)', 'Time delay', ymin=0.05,
ylim=(max(n)+0.1*max(n)))
plt.savefig('deltatime_summ')
plt.figure()
genplotlib.plotdata(d, md, k, 'b', 'Delay (seconds)', 'Time delay', ymin=0.05,
ylim=(max(n)+0.1*max(n)))
plt.savefig('deltatime_summ_bar')
def plotphasenlpersec(fname, K):
"""Plots and saves the phase vs. nlpersec plots; run from the 'summary' folder."""
d = genplotlib.gendict_phase(fname, 'dp_freq')
plt.figure()
genplotlib.plot_phaseplot_lpf(d, K, 'no', 'Phase vs. volume drunk')
pname = 'deltaphasevsvol'
plt.savefig(pname)
plt.figure()
ad = genavgphasefreqdict(d)
print(ad)
genplotlib.plot_phaseplot_lpf(ad,
K,
'no',
'Average phase vs. average volume',
withn='no')
aname = 'deltaphasevsfreq_avg'
plt.savefig(aname)
"""Plots bar graph from data in 'peakf.txt' and saves it in the summary directory. Run from a
data/ or summary/ folder."""
dictmeans = genplotlib.genlist(dictdata)
n = []
for i, v in dictdata.iteritems():
n.append(max(v))
plt.figure()
genplotlib.plotdata(d,
md,
k,
'b',
'Delay (seconds)',
'Time delay',
ymin=0.05,
ylim=(max(n)))
plt.savefig(plotname)
print(os.path.abspath(os.getcwd()))
k = load_keys(keyfile)
d = genplotlib.gendict_phase(fname, 'deltatime')
print(d)
md = genplotlib.genlist(d)
print(md)
writemeans(md, meansfname)
plotbar(d, k, plotname)
def writemeans_deltatime(fnameread, fnamewrite):
d = gpl.gendict_phase(fnameread, 'deltatime')
md = gpl.genlist(d)
writemeans(md, fnamewrite)
fname = sys.argv[1]
keyfile = sys.argv[2]
plotname = sys.argv[3]
meansfname = sys.argv[4]
def plotbar(dictdata, keylist, plotname, fdir='.', ylim=10):
"""Plots bar graph from data in 'peakf.txt' and saves it in the summary directory. Run from a
data/ or summary/ folder."""
dictmeans = genplotlib.genlist(dictdata)
n = []
for i, v in dictdata.iteritems():
n.append(max(v))
plt.figure()
genplotlib.plotdata(d, md, k, 'b', 'Delay (seconds)', 'Time delay', ymin=0.05, ylim=(max(n)))
plt.savefig(plotname)
print(os.path.abspath(os.getcwd()))
k = load_keys(keyfile)
d = genplotlib.gendict_phase(fname, 'deltatime')
print(d)
md = genplotlib.genlist(d)
print(md)
writemeans(md, meansfname)
plotbar(d, k, plotname)
def writemeans_deltatime(fnameread, fnamewrite):
d = gpl.gendict_phase(fnameread, 'deltatime')
md = gpl.genlist(d)
writemeans(md, fnamewrite)