def model_fn(features, labels, mode, params): # pylint: disable=unused-argument
"""The `model_fn` for TPUEstimator."""
tf.logging.info("*** Features ***")
for name in sorted(features.keys()):
tf.logging.info(" name = %s, shape = %s" %
(name, features[name].shape))
input_ids = features["input_ids"]
input_mask = features["input_mask"]
segment_ids = features["segment_ids"]
embeddings = self._create_model(model_config, run_config,
input_ids, input_mask, segment_ids,
model_type)
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
output_spec = None
if mode == tf.estimator.ModeKeys.TRAIN:
loss = tf.Variable(0.0, name="loss", dtype=tf.float32)
train_op, _, _ = model_utils.get_train_op(FLAGS, loss)
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=loss,
train_op=train_op,
scaffold_fn=scaffold_fn)
else:
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
predictions={"embeddings": embeddings},
scaffold_fn=scaffold_fn)
return output_spec
def model_fn(features, labels, mode, params):
bsz = tf.shape(features["entity_ids"])[0]
qlen = tf.shape(features["entity_ids"])[1]
features["entity_ids_list"] = tf.reshape(features["entity_ids_list"], [bsz, -1, qlen])
# Build the neural network
# Because Dropout have different behavior at training and prediction time, we
# need to create 2 distinct computation graphs that still share the same weights.
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
# get semantic vector of input
emb_a, _ = create_embed_encoder(features['entity_ids'], is_training=is_training)
emb_b, _ = create_embed_encoder(features['entity_ids_list'], is_training=is_training, is_normal=False)
# Define loss and optimizer
sim_op, sim_emb = tf_sim(emb_a, emb_b)
# TF Estimators requires to return a EstimatorSpec, that specify
# the different ops for training, evaluating, predicting...
if mode == tf.estimator.ModeKeys.TRAIN:
# total_loss = tf_loss(sim_op, sim_emb)
#total_loss = cross_entropy_loss(sim_op, features['label'])
total_loss = multi_loss(sim_op, sim_emb, features['labels'])
#### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(FLAGS, total_loss)
# train_op = tf.train.AdamOptimizer(learning_rate=FLAGS.learning_rate).minimize(total_loss, global_step=tf.train.get_global_step())
estim_specs = tf.estimator.EstimatorSpec(mode=mode, loss=total_loss, train_op=train_op)
# If prediction mode, early return
elif mode == tf.estimator.ModeKeys.PREDICT:
estim_specs = tf.estimator.EstimatorSpec(mode, predictions={'sim_op': sim_op}) # pred_classes})
else:
raise NotImplementedError
return estim_specs
def score_fn(self):
score, debug_info = get_score(self.feature_emb, self.feature_vec, self.is_training) ; self.debug_info['encoder_debug_info']=debug_info
# calculate pairwise loss
S_ij = self.label - tf.transpose(self.label) ; self.debug_info['label']=self.label
S_ij = tf.maximum(tf.minimum(1., S_ij), -1.)
P_ij = (1 / 2) * (1 + S_ij)
s_i_minus_s_j = score - tf.transpose(score); self.debug_info['s_i_minus_s_j']=s_i_minus_s_j; self.debug_info['P_ij']=P_ij
logloss = tf.nn.sigmoid_cross_entropy_with_logits(logits=s_i_minus_s_j, labels=P_ij) ; self.debug_info['logloss']=logloss
# only extracted the loss of pairs of the same group
mask1 = tf.equal(self.qid - tf.transpose(self.qid), 0) ; self.debug_info['qid']=self.qid
mask1 = tf.cast(mask1, tf.float32)
# exclude the pair of sample and itself
n = tf.shape(self.feature_emb)[0]
mask2 = tf.ones([n, n]) - tf.diag(tf.ones([n]))
mask = mask1 * mask2
num_pairs = tf.reduce_sum(mask) ; self.debug_info['mask1']=mask1; self.debug_info['mask2']=mask2; self.debug_info['mask']=mask
loss = tf.cond(tf.equal(num_pairs, 0), lambda: 0., lambda: tf.reduce_sum(logloss * mask) / num_pairs)
# set optimazition
#train_op = tf.train.AdamOptimizer().minimize(loss)
#### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(FLAGS, loss)
self.loss, self.num_pairs, self.score, self.train_op = loss, num_pairs, score, train_op
def model_fn(features, labels, mode, params): # pylint: disable=unused-argument
"""The `model_fn` for TPUEstimator."""
def metric_fn(label_ids, predict_ids):
precision = tf.metrics.precision(labels=label_ids,
predictions=predict_ids)
recall = tf.metrics.recall(labels=label_ids,
predictions=predict_ids)
metric = {
"precision": precision,
"recall": recall,
}
return metric
tf.logging.info("*** Features ***")
for name in sorted(features.keys()):
tf.logging.info(" name = %s, shape = %s" %
(name, features[name].shape))
input_ids = features["input_ids"]
input_masks = features["input_masks"]
segment_ids = features["segment_ids"]
label_ids = features["label_ids"] if mode in [
tf.estimator.ModeKeys.TRAIN, tf.estimator.ModeKeys.EVAL
] else None
loss, predict_ids = self._create_model(model_config, run_config,
input_ids, input_masks,
segment_ids, label_ids,
label_list, mode)
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
output_spec = None
if mode == tf.estimator.ModeKeys.TRAIN:
train_op, _, _ = model_utils.get_train_op(FLAGS, loss)
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=loss,
train_op=train_op,
scaffold_fn=scaffold_fn)
elif mode == tf.estimator.ModeKeys.EVAL:
masked_label_ids = self._get_masked_data(label_ids, label_list)
masked_predict_ids = self._get_masked_data(
predict_ids, label_list)
eval_metrics = (metric_fn,
[masked_label_ids, masked_predict_ids])
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=loss,
eval_metrics=eval_metrics,
scaffold_fn=scaffold_fn)
else:
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
predictions={"predict": predict_ids},
scaffold_fn=scaffold_fn)
return output_spec
def model_fn(features, labels, mode, params):
"""doc."""
#### Training or Evaluation
is_training = mode == tf.estimator.ModeKeys.TRAIN
assert is_training
#### Retrieve `mems` from `params["cache"]`
mems = {}
idx = 0
if FLAGS.mem_len > 0:
mems['mems'] = params['cache']
#### Get loss from inputs
total_loss, new_mems, monitor_dict = function_builder.get_loss(
FLAGS, features, labels, mems, is_training
)
#### Turn `new_mems` into `new_cache`
new_cache = []
if FLAGS.mem_len > 0:
new_cache += new_mems['mems']
#### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info('#params: {}'.format(num_params))
#### Configuring the optimizer
train_op, learning_rate, gnorm = model_utils.get_train_op(
FLAGS, total_loss
)
monitor_dict['lr'] = learning_rate
monitor_dict['gnorm'] = gnorm
#### Customized initial checkpoint
scaffold_fn = model_utils.init_from_checkpoint(
FLAGS, global_vars = True
)
#### Creating host calls
host_call = function_builder.construct_scalar_host_call(
monitor_dict = monitor_dict,
model_dir = FLAGS.model_dir,
prefix = 'train/',
reduce_fn = tf.reduce_mean,
)
#### Constucting training TPUEstimatorSpec with new cache.
train_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode = mode,
loss = total_loss,
train_op = train_op,
host_call = host_call,
scaffold_fn = scaffold_fn,
)
train_spec.cache = new_cache
return train_spec
def model_fn(features, labels, mode, params): # pylint: disable=unused-argument
"""The `model_fn` for TPUEstimator."""
def metric_fn(sent_label_ids, sent_predict_ids):
sent_accuracy = tf.metrics.accuracy(
labels=sent_label_ids, predictions=sent_predict_ids)
metric = {
"sent_accuracy": sent_accuracy,
}
return metric
tf.logging.info("*** Features ***")
for name in sorted(features.keys()):
tf.logging.info(" name = %s, shape = %s" %
(name, features[name].shape))
input_ids = features["input_ids"]
input_masks = features["input_masks"]
segment_ids = features["segment_ids"]
sent_label_ids = features["sent_label_ids"] if mode in [
tf.estimator.ModeKeys.TRAIN, tf.estimator.ModeKeys.EVAL
] else None
loss, sent_predict_ids, sent_predict_scores, sent_predict_probs = self._create_model(
input_ids, input_masks, segment_ids, sent_label_ids,
sent_label_list, mode)
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
output_spec = None
if mode == tf.estimator.ModeKeys.TRAIN:
train_op, _, _ = model_utils.get_train_op(FLAGS, loss)
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=loss,
train_op=train_op,
scaffold_fn=scaffold_fn)
elif mode == tf.estimator.ModeKeys.EVAL:
eval_metrics = (metric_fn, [sent_label_ids, sent_predict_ids])
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=loss,
eval_metrics=eval_metrics,
scaffold_fn=scaffold_fn)
else:
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
predictions={
"sent_predict_id": sent_predict_ids,
"sent_predict_score": sent_predict_scores,
"sent_predict_prob": sent_predict_probs
},
scaffold_fn=scaffold_fn)
return output_spec
def xlnet_optimizer_layer(self):
correct_prediction = tf.equal(
tf.argmax(self.logits, 2), tf.cast(self.targets, tf.int64))
self.accuracy = tf.reduce_mean(tf.cast(correct_prediction, tf.float32))
FLAGS.train_steps = int(
self.train_length / FLAGS.train_batch_size * self.max_epoch)
FLAGS.warmup_steps = int(FLAGS.train_steps * 0.1)
self.train_op, self.learning_rate, _ = model_utils.get_train_op(FLAGS, self.loss)
self.saver = tf.train.Saver(tf.global_variables(), max_to_keep=5)
def __init__(self,
dictionary_size,
embedding_size=_WORD_EMBED_SIZE,
output_classes=3):
self.graph = tf.Graph()
batch_size = None
with self.graph.as_default():
# Create input placeholders
self.word_ids = tf.placeholder(dtype=tf.int32,
shape=(batch_size, None))
self.word_ids_len = tf.placeholder(dtype=tf.int32,
shape=(batch_size, ))
self.labels = tf.placeholder(dtype=tf.int32, shape=(batch_size, 1))
# Create word embeddings
word_embeddings = tf.get_variable(
"word_embeddings", [dictionary_size, embedding_size])
embedded_word_ids = tf.nn.embedding_lookup(word_embeddings,
self.word_ids)
# Create RNN on top of word embeddings
rnn_out = model_utils.rnn_vanilla(
inputs=embedded_word_ids,
units=_RNN_UNITS,
sequence_length=self.word_ids_len)
# Create predictions
logits = tf.layers.dense(inputs=rnn_out,
units=output_classes,
activation=None)
probabilities = tf.nn.softmax(logits=logits, axis=-1)
self.outputs = tf.argmax(probabilities, axis=-1)
# Create loss
self.loss = tf.losses.sparse_softmax_cross_entropy(
labels=self.labels, logits=logits)
# Create accuracy node
self.acc_value, self.acc_op, self.acc_reset = model_utils.accuracy(
labels=self.labels, predictions=self.outputs)
# Create summary for monitoring training progress
tf.summary.scalar("loss", self.loss)
tf.summary.scalar("acc", self.acc_value)
self.summary = tf.summary.merge_all()
# Create training operation
self.train_op = model_utils.get_train_op(self.loss,
learning_rate=1e-4)
def model_fn(features, labels, mode, params):
"""doc."""
#### Training or Evaluation
is_eval = mode == tf.estimator.ModeKeys.EVAL
assert is_eval
#### Retrieve `mems` from `params["cache"]`
mems = {}
idx = 0
if FLAGS.mem_len > 0:
mems['mems'] = params['cache']
#### Get loss from inputs
total_loss, total_accuracy, new_mems, monitor_dict = custom_function_builder.get_loss(
FLAGS, features, labels, mems, False)
#### Turn `new_mems` into `new_cache`
new_cache = []
if FLAGS.mem_len > 0:
new_cache += new_mems['mems']
#### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info('#params: {}'.format(num_params))
#### Configuring the optimizer
train_op, learning_rate, gnorm = model_utils.get_train_op(
FLAGS, total_loss)
monitor_dict['lr'] = learning_rate
monitor_dict['gnorm'] = gnorm
#### Customized initial checkpoint
scaffold_fn = model_utils.init_from_checkpoint(FLAGS, global_vars=True)
# def metric_fn(accuracy):
# return
#
# eval_metrics = (metric_fn, [total_accuracy])
output_spec = tf.estimator.EstimatorSpec(
mode=mode,
loss=total_loss,
train_op=train_op,
eval_metric_ops={'accuracy': total_accuracy},
scaffold=scaffold_fn,
)
return output_spec
def model_fn(features, labels, mode, params):
#### Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
#### Get loss from inputs
#********************************************************************************************#
bsz_per_core = tf.shape(features["input_ids"])[0]
inp = tf.transpose(features["input_ids"], [1, 0])
seg_id = tf.transpose(features["segment_ids"], [1, 0])
inp_mask = tf.transpose(features["input_mask"], [1, 0])
label_ids = features["label_ids"]
xlnet_config = xlnet.XLNetConfig(json_path=FLAGS.model_config_path)
run_config = xlnet.create_run_config(is_training, True, FLAGS)
xlnet_model = xlnet.XLNetModel(xlnet_config=xlnet_config,
run_config=run_config,
input_ids=inp,
seg_ids=seg_id,
input_mask=inp_mask)
#summary = xlnet_model.get_pooled_out(FLAGS.summary_type, FLAGS.use_summ_proj)
# 获取对应的embedding 输入数据[batch_size, seq_length, embedding_size]
xlnet_model_out = xlnet_model.get_sequence_output()
embedding = tf.transpose(xlnet_model_out, [1, 0, 2])
max_seq_length = embedding.shape[1].value
# 算序列真实长度
used = tf.sign(tf.abs(features["input_ids"]))
lengths = tf.reduce_sum(
used, reduction_indices=1) # [batch_size] 大小的向量，包含了当前batch中的序列长度
# 添加CRF output layer
blstm_crf = BLSTM_CRF(embedded_chars=embedding,
hidden_unit=10,
cell_type="lstm",
num_layers=1,
dropout_rate=0.5,
initializers=initializers,
num_labels=n_class,
seq_length=max_seq_length,
labels=label_ids,
lengths=lengths,
is_training=is_training)
total_loss, logits, trans, pred_ids = blstm_crf.add_blstm_crf_layer(
crf_only=True)
#********************************************************************************************#
#### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info('#params: {}'.format(num_params))
#### load pretrained models
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
#### Evaluation mode
if mode == tf.estimator.ModeKeys.EVAL:
def metric_fn(label_ids, pred_ids):
return {
"eval_loss":
tf.metrics.mean_squared_error(labels=label_ids,
predictions=pred_ids),
}
eval_metrics = metric_fn(features["label_ids"], pred_ids)
eval_spec = tf.estimator.EstimatorSpec(
mode=mode, loss=total_loss, eval_metric_ops=eval_metrics)
return eval_spec
elif mode == tf.estimator.ModeKeys.PREDICT:
predictions = {
"logits": logits,
"labels": label_ids,
"pred_ids": pred_ids,
"input_mask": features["input_mask"]
}
output_spec = tf.estimator.EstimatorSpec(mode=mode,
predictions=predictions)
return output_spec
#### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(
FLAGS, total_loss)
monitor_dict = {}
monitor_dict["lr"] = learning_rate
#### Constucting training TPUEstimatorSpec with new cache.
train_spec = tf.estimator.EstimatorSpec(mode=mode,
loss=total_loss,
train_op=train_op)
return train_spec
def train(ps_device):
# Get input function and model function
train_input_fn, record_info_dict = data_utils.get_input_fn(
tfrecord_dir=FLAGS.record_info_dir,
split="train",
bsz_per_host=FLAGS.train_batch_size,
seq_len=FLAGS.seq_len,
reuse_len=FLAGS.reuse_len,
bi_data=FLAGS.bi_data,
num_hosts=1,
num_core_per_host=1, # set to one no matter how many GPUs
perm_size=FLAGS.perm_size,
mask_alpha=FLAGS.mask_alpha,
mask_beta=FLAGS.mask_beta,
uncased=FLAGS.uncased,
num_passes=FLAGS.num_passes,
use_bfloat16=FLAGS.use_bfloat16,
num_predict=FLAGS.num_predict)
# for key, info in record_info_dict.items():
tf.logging.info("num of batches {}".format(record_info_dict["num_batch"]))
# Create input tensors / placeholders
bsz_per_core = FLAGS.train_batch_size // FLAGS.num_core_per_host
params = {
"batch_size": FLAGS.train_batch_size # the whole batch
}
train_set = train_input_fn(params)
example = train_set.make_one_shot_iterator().get_next()
if FLAGS.num_core_per_host > 1:
examples = [{} for _ in range(FLAGS.num_core_per_host)]
for key in example.keys():
vals = tf.split(example[key], FLAGS.num_core_per_host, 0)
for device_id in range(FLAGS.num_core_per_host):
examples[device_id][key] = vals[device_id]
else:
examples = [example]
# Create computational graph
tower_mems, tower_losses, tower_new_mems, tower_grads_and_vars = [], [], [], []
for i in range(FLAGS.num_core_per_host):
reuse = True if i > 0 else None
with tf.device(assign_to_gpu(i, ps_device)), \
tf.variable_scope(tf.get_variable_scope(), reuse=reuse):
# The mems for each tower is a dictionary
mems_i = {}
if FLAGS.mem_len:
mems_i["mems"] = create_mems_tf(bsz_per_core)
loss_i, new_mems_i, grads_and_vars_i = single_core_graph(
is_training=True,
features=examples[i],
mems=mems_i)
tower_mems.append(mems_i)
tower_losses.append(loss_i)
tower_new_mems.append(new_mems_i)
tower_grads_and_vars.append(grads_and_vars_i)
# average losses and gradients across towers
if len(tower_losses) > 1:
loss = tf.add_n(tower_losses) / len(tower_losses)
grads_and_vars = average_grads_and_vars(tower_grads_and_vars)
else:
loss = tower_losses[0]
grads_and_vars = tower_grads_and_vars[0]
# get train op
train_op, learning_rate, gnorm = model_utils.get_train_op(FLAGS, None,
grads_and_vars=grads_and_vars)
global_step = tf.train.get_global_step()
# Training loop
# initialize mems
tower_mems_np = []
for i in range(FLAGS.num_core_per_host):
mems_i_np = {}
for key in tower_mems[i].keys():
mems_i_np[key] = initialize_mems_np(bsz_per_core)
tower_mems_np.append(mems_i_np)
saver = tf.train.Saver()
gpu_options = tf.GPUOptions(per_process_gpu_memory_fraction=0.97)#allow_growth=True)
model_utils.init_from_checkpoint(FLAGS, global_vars=True)
with tf.Session(config=tf.ConfigProto(allow_soft_placement=True, log_device_placement=False,
gpu_options=gpu_options)) as sess:
sess.run(tf.global_variables_initializer())
sess.graph.finalize()
run_metadata = tf.RunMetadata()
options = tf.RunOptions(trace_level=tf.RunOptions.SOFTWARE_TRACE)
dot_rep = graph_to_dot(tf.get_default_graph())
# s = Source(dot_rep, filename="test.gv", format="PNG")
with open('profs/xln.dot', 'w') as fwr:
fwr.write(str(dot_rep))
operations_tensors = {}
operations_attributes = {}
operations_names = tf.get_default_graph().get_operations()
count1 = 0
count2 = 0
for operation in operations_names:
operation_name = operation.name
operations_info = tf.get_default_graph(
).get_operation_by_name(operation_name).values()
try:
operations_attributes[operation_name] = []
operations_attributes[operation_name].append(
operation.type)
operations_attributes[operation_name].append(tf.get_default_graph(
).get_tensor_by_name(operation_name + ':0').dtype._is_ref_dtype)
except:
pass
if len(operations_info) > 0:
if not (operations_info[0].shape.ndims is None):
operation_shape = operations_info[0].shape.as_list(
)
operation_dtype_size = operations_info[0].dtype.size
if not (operation_dtype_size is None):
operation_no_of_elements = 1
for dim in operation_shape:
if not(dim is None):
operation_no_of_elements = operation_no_of_elements * dim
total_size = operation_no_of_elements * operation_dtype_size
operations_tensors[operation_name] = total_size
else:
count1 = count1 + 1
else:
count1 = count1 + 1
operations_tensors[operation_name] = -1
# print('no shape_1: ' + operation_name)
# print('no shape_2: ' + str(operations_info))
# operation_namee = operation_name + ':0'
# tensor = tf.get_default_graph().get_tensor_by_name(operation_namee)
# print('no shape_3:' + str(tf.shape(tensor)))
# print('no shape:' + str(tensor.get_shape()))
else:
# print('no info :' + operation_name)
# operation_namee = operation.name + ':0'
count2 = count2 + 1
operations_tensors[operation_name] = -1
# try:
# tensor = tf.get_default_graph().get_tensor_by_name(operation_namee)
# print(tensor)
# print(tf.shape(tensor))
# except:
# print('no tensor: ' + operation_namee)
print(count1)
print(count2)
with open('./profs/tensors_sz_32.txt', 'w') as f:
for tensor, size in operations_tensors.items():
f.write('"' + tensor + '"::' + str(size) + '\n')
with open('./profs/operations_attributes.txt', 'w') as f:
for op, attrs in operations_attributes.items():
strr = op
for attr in attrs:
strr += '::' + str(attr)
strr += '\n'
f.write(strr)
fetches = [loss, tower_new_mems, global_step,
gnorm, learning_rate, train_op]
iter = 0
total_loss, prev_step = 0., -1
while True:
feed_dict = {}
for i in range(FLAGS.num_core_per_host):
for key in tower_mems_np[i].keys():
for m, m_np in zip(tower_mems[i][key], tower_mems_np[i][key]):
feed_dict[m] = m_np
if iter % 10 == 7 or iter == 0:
fetched = sess.run(fetches, feed_dict=feed_dict, options=options, run_metadata=run_metadata)
#if iter > 0:
profile(run_metadata, iter)
else:
t0 = time.time()
fetched = sess.run(fetches, feed_dict=feed_dict)
print(time.time() - t0)
if iter == 0:
mem_options = tf.profiler.ProfileOptionBuilder.time_and_memory()
mem_options["min_bytes"] = 0
mem_options["min_micros"] = 0
mem_options["output"] = 'file:outfile=./profs/mem.txt'
mem_options["select"] = ("bytes", "peak_bytes", "output_bytes",
"residual_bytes")
mem = tf.profiler.profile(
tf.Graph(), run_meta=run_metadata, cmd="scope", options=mem_options)
with open('profs/mem2.txt', 'w') as f:
f.write(str(mem))
iter += 1
loss_np, tower_mems_np, curr_step = fetched[:3]
total_loss += loss_np
if curr_step > 0 and curr_step % FLAGS.iterations == 0:
curr_loss = total_loss / (curr_step - prev_step)
tf.logging.info("[{}] | gnorm {:.2f} lr {:8.6f} "
"| loss {:.2f} | pplx {:>7.2f}, bpc {:>7.4f}".format(
curr_step, fetched[-3], fetched[-2],
curr_loss, math.exp(curr_loss), curr_loss / math.log(2)))
total_loss, prev_step = 0., curr_step
if curr_step > 0 and curr_step % FLAGS.save_steps == 0:
save_path = os.path.join(FLAGS.model_dir, "model.ckpt")
saver.save(sess, save_path)
tf.logging.info("Model saved in path: {}".format(save_path))
if curr_step >= FLAGS.train_steps:
break
def model_fn(features, labels, mode, params):
#### Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
total_loss, per_example_loss, logits = function_builder.get_race_loss(
FLAGS, features, is_training)
#### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
logger.info('#params: {}'.format(num_params))
#### load pretrained models
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
#### Evaluation mode
if mode == tf.estimator.ModeKeys.EVAL:
assert FLAGS.num_hosts == 1
def metric_fn(per_example_loss, label_ids, logits, is_real_example):
predictions = tf.argmax(logits, axis=-1, output_type=tf.int32)
eval_input_dict = {
'labels': label_ids,
'predictions': predictions,
'weights': is_real_example
}
accuracy = tf.metrics.accuracy(**eval_input_dict)
loss = tf.metrics.mean(values=per_example_loss,
weights=is_real_example)
return {
'eval_accuracy': accuracy,
'eval_loss': loss}
is_real_example = tf.cast(features["is_real_example"],
dtype=tf.float32)
#### Constucting evaluation TPUEstimatorSpec with new cache.
label_ids = tf.reshape(features['label_ids'], [-1])
metric_args = [per_example_loss, label_ids, logits, is_real_example]
if FLAGS.use_tpu:
eval_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
eval_metrics=(metric_fn, metric_args),
scaffold_fn=scaffold_fn)
else:
eval_spec = tf.estimator.EstimatorSpec(
mode=mode,
loss=total_loss,
eval_metric_ops=metric_fn(*metric_args))
return eval_spec
#### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(FLAGS, total_loss)
monitor_dict = {}
monitor_dict["lr"] = learning_rate
#### Constucting training TPUEstimatorSpec with new cache.
if FLAGS.use_tpu:
#### Creating host calls
host_call = None
train_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode, loss=total_loss, train_op=train_op,
host_call=host_call,
scaffold_fn=scaffold_fn)
else:
train_spec = tf.estimator.EstimatorSpec(
mode=mode, loss=total_loss, train_op=train_op)
return train_spec
def model_fn(features, labels, mode, params):
# ### Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
return_dict = function_builder.get_classification_outputs(
FLAGS, features, is_training)
# per_example_loss = return_dict["per_example_loss"]
cls_logits = return_dict["cls_logits"]
# ### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
logger.info('#params: {}'.format(num_params))
# ### load pretrained models
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
if mode == tf.estimator.ModeKeys.PREDICT:
# label_ids = tf.reshape(features["cls"], [-1])
predictions = {
"feature_id": features["feature_id"],
"cls_logits": cls_logits,
# "cls": label_ids,
}
if FLAGS.use_tpu:
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
predictions=predictions,
scaffold_fn=scaffold_fn)
else:
output_spec = tf.estimator.EstimatorSpec(
mode=mode, predictions=predictions)
return output_spec
def compute_loss(log_probs, positions, depth):
one_hot_positions = tf.one_hot(positions,
depth=depth,
dtype=tf.float32)
loss = -tf.reduce_sum(one_hot_positions * log_probs, axis=-1)
loss = tf.reduce_mean(loss)
return loss
cls_log_probs = return_dict["cls_log_probs"]
num_choices = FLAGS.num_choices
if num_choices:
num_classes = num_choices
else:
num_classes = FLAGS.num_classes
total_loss = compute_loss(cls_log_probs,
features["cls"],
depth=num_classes)
# ### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(
FLAGS, total_loss)
monitor_dict = {'loss/cls': total_loss, "lr": learning_rate}
# ### Constucting training TPUEstimatorSpec with new cache.
if FLAGS.use_tpu:
# ### Creating host calls
if not FLAGS.is_regression:
label_ids = tf.reshape(features['cls'], [-1])
predictions = tf.argmax(cls_logits,
axis=-1,
output_type=label_ids.dtype)
is_correct = tf.equal(predictions, label_ids)
accuracy = tf.reduce_mean(tf.cast(is_correct, tf.float32))
monitor_dict["accuracy"] = accuracy
host_call = function_builder.construct_scalar_host_call(
monitor_dict=monitor_dict,
model_dir=FLAGS.model_dir,
prefix="train/",
reduce_fn=tf.reduce_mean)
else:
host_call = None
train_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
train_op=train_op,
host_call=host_call,
scaffold_fn=scaffold_fn)
else:
train_spec = tf.estimator.EstimatorSpec(mode=mode,
loss=total_loss,
train_op=train_op)
return train_spec
def model_fn(features, labels, mode, params):
#### Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
#### Get loss from inputs
outputs = function_builder.get_qa_outputs(FLAGS, features, is_training)
#### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info('#params: {}'.format(num_params))
scaffold_fn = None
#### Evaluation mode
if mode == tf.estimator.ModeKeys.PREDICT:
if FLAGS.init_checkpoint:
tf.logging.info("init_checkpoint not being used in predict mode.")
predictions = {
"unique_ids": features["unique_ids"],
"start_top_index": outputs["start_top_index"],
"start_top_log_probs": outputs["start_top_log_probs"],
"end_top_index": outputs["end_top_index"],
"end_top_log_probs": outputs["end_top_log_probs"],
"cls_logits": outputs["cls_logits"]
}
if FLAGS.use_tpu:
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode, predictions=predictions, scaffold_fn=scaffold_fn)
else:
output_spec = tf.estimator.EstimatorSpec(
mode=mode, predictions=predictions)
return output_spec
### Compute loss
seq_length = tf.shape(features["input_ids"])[1]
def compute_loss(log_probs, positions):
one_hot_positions = tf.one_hot(
positions, depth=seq_length, dtype=tf.float32)
loss = - tf.reduce_sum(one_hot_positions * log_probs, axis=-1)
loss = tf.reduce_mean(loss)
return loss
start_loss = compute_loss(
outputs["start_log_probs"], features["start_positions"])
end_loss = compute_loss(
outputs["end_log_probs"], features["end_positions"])
total_loss = (start_loss + end_loss) * 0.5
cls_logits = outputs["cls_logits"]
is_impossible = tf.reshape(features["is_impossible"], [-1])
regression_loss = tf.nn.sigmoid_cross_entropy_with_logits(
labels=is_impossible, logits=cls_logits)
regression_loss = tf.reduce_mean(regression_loss)
# note(zhiliny): by default multiply the loss by 0.5 so that the scale is
# comparable to start_loss and end_loss
total_loss += regression_loss * 0.5
#### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(FLAGS, total_loss)
monitor_dict = {}
monitor_dict["lr"] = learning_rate
#### load pretrained models
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
#### Constucting training TPUEstimatorSpec with new cache.
if FLAGS.use_tpu:
host_call = function_builder.construct_scalar_host_call(
monitor_dict=monitor_dict,
model_dir=FLAGS.model_dir,
prefix="train/",
reduce_fn=tf.reduce_mean)
train_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode, loss=total_loss, train_op=train_op, host_call=host_call,
scaffold_fn=scaffold_fn)
else:
train_spec = tf.estimator.EstimatorSpec(
mode=mode, loss=total_loss, train_op=train_op)
return train_spec
def train(ps_device):
##### Get input function and model function
train_input_fn, record_info_dict = data_utils.get_input_fn(
info_dir=os.path.join(FLAGS.record_info_dir, "train"),
split="train",
bsz_per_host=FLAGS.train_batch_size,
seq_len=FLAGS.seq_len,
reuse_len=FLAGS.reuse_len,
bi_data=FLAGS.bi_data,
num_hosts=1,
num_core_per_host=1, # set to one no matter how many GPUs
perm_size=FLAGS.perm_size,
mask_alpha=FLAGS.mask_alpha,
mask_beta=FLAGS.mask_beta,
use_bfloat16=FLAGS.use_bfloat16,
num_predict=FLAGS.num_predict)
valid_input_fn, record_info_dict_valid = data_utils.get_input_fn(
info_dir=os.path.join(FLAGS.record_info_dir, "valid"),
split="valid",
bsz_per_host=FLAGS.train_batch_size,
seq_len=FLAGS.seq_len,
reuse_len=FLAGS.reuse_len,
bi_data=FLAGS.bi_data,
num_hosts=1,
num_core_per_host=1,
perm_size=FLAGS.perm_size,
mask_alpha=FLAGS.mask_alpha,
mask_beta=FLAGS.mask_beta,
use_bfloat16=FLAGS.use_bfloat16,
num_predict=FLAGS.num_predict)
# for key, info in record_info_dict.items():
num_train_batches = record_info_dict["num_batch"]
tf.logging.info("num of train batches {}".format(
record_info_dict["num_batch"]))
tf.logging.info("num of validation batches {}".format(
record_info_dict_valid["num_batch"]))
##### Create input tensors / placeholders
bsz_per_core = FLAGS.train_batch_size // FLAGS.num_core_per_host
params = {
"batch_size": FLAGS.train_batch_size # the whole batch
}
train_set = train_input_fn(params)
valid_set = valid_input_fn(params)
t_iter = train_set.make_initializable_iterator()
example = t_iter.get_next()
v_iter = valid_set.make_initializable_iterator()
v_example = v_iter.get_next()
if FLAGS.num_core_per_host > 1:
# train set
examples = [{} for _ in range(FLAGS.num_core_per_host)]
for key in example.keys():
vals = tf.split(example[key], FLAGS.num_core_per_host, 0)
for device_id in range(FLAGS.num_core_per_host):
examples[device_id][key] = vals[device_id]
# validation set
v_examples = [{} for _ in range(FLAGS.num_core_per_host)]
for key in v_example.keys():
vals = tf.split(v_example[key], FLAGS.num_core_per_host, 0)
for device_id in range(FLAGS.num_core_per_host):
v_examples[device_id][key] = vals[device_id]
else:
examples = [example]
v_examples = [v_example]
##### Create computational graph
tower_mems, tower_losses, tower_new_mems, tower_grads_and_vars = [], [], [], []
v_tower_mems, v_tower_losses, v_tower_new_mems = [], [], []
for i in range(FLAGS.num_core_per_host):
reuse = True if i > 0 else None
with tf.device(assign_to_gpu(i, ps_device)), \
tf.variable_scope(tf.get_variable_scope(), reuse=reuse):
# The mems for each tower is a dictionary
mems_i = {}
v_mems_i = {}
if FLAGS.mem_len:
mems_i["mems"] = create_mems_tf(bsz_per_core)
v_mems_i["mems"] = create_mems_tf(bsz_per_core)
loss_i, new_mems_i, grads_and_vars_i = single_core_graph(
is_training=True, features=examples[i], mems=mems_i)
v_loss_i, v_new_mems_i = single_core_graph(is_training=False,
features=v_examples[i],
mems=v_mems_i)
tower_mems.append(mems_i)
tower_losses.append(loss_i)
tower_new_mems.append(new_mems_i)
tower_grads_and_vars.append(grads_and_vars_i)
v_tower_mems.append(v_mems_i)
v_tower_losses.append(v_loss_i)
v_tower_new_mems.append(v_new_mems_i)
## average losses and gradients across towers
if len(tower_losses) > 1:
loss = tf.add_n(tower_losses) / len(tower_losses)
grads_and_vars = average_grads_and_vars(tower_grads_and_vars)
else:
loss = tower_losses[0]
grads_and_vars = tower_grads_and_vars[0]
if len(v_tower_losses) > 1:
v_loss = tf.add_n(v_tower_losses) / len(v_tower_losses)
else:
v_loss = v_tower_losses[0]
## get train op
train_op, learning_rate, gnorm = model_utils.get_train_op(
FLAGS, None, num_train_batches, grads_and_vars=grads_and_vars)
global_step = tf.train.get_global_step()
##### Training loop
# initialize mems
tower_mems_np = []
v_tower_mems_np = []
for i in range(FLAGS.num_core_per_host):
mems_i_np = {}
v_mems_i_np = {}
for key in tower_mems[i].keys():
mems_i_np[key] = initialize_mems_np(bsz_per_core)
v_mems_i_np[key] = initialize_mems_np(bsz_per_core)
tower_mems_np.append(mems_i_np)
v_tower_mems_np.append(v_mems_i_np)
saver = tf.train.Saver()
gpu_options = tf.GPUOptions(allow_growth=True)
model_utils.init_from_checkpoint(FLAGS, global_vars=True)
# Create performance summaries for Tensorboard logging
training_performance_summaries, valid_performance_summaries = tb.tensorboard_setup(
)
with tf.Session(config=tf.ConfigProto(allow_soft_placement=True,
gpu_options=gpu_options)) as sess:
sess.run(tf.global_variables_initializer())
# variables that are run in the session
fetches = [
loss, tower_new_mems, global_step, gnorm, learning_rate, train_op
]
v_fetches = [v_loss, v_tower_new_mems]
# Create writers for Tensorboard logging
info_dict = {
"id": FLAGS.run_id,
"n_layers": FLAGS.n_layers,
"d_model": FLAGS.d_model,
"n_heads": FLAGS.n_head
}
train_summary_writer, valid_summary_writer = tb.create_writers(
sess, info_dict, logging_dir=FLAGS.tb_logging_dir)
total_loss, prev_step = 0., -1
for i in range(FLAGS.epochs):
# Train loop
try:
sess.run(t_iter.initializer)
while True:
feed_dict = {}
for i in range(FLAGS.num_core_per_host):
for key in tower_mems_np[i].keys():
for m, m_np in zip(tower_mems[i][key],
tower_mems_np[i][key]):
feed_dict[m] = m_np
fetched = sess.run(fetches, feed_dict=feed_dict)
loss_np, tower_mems_np, curr_step = fetched[:3]
total_loss += loss_np
print(curr_step)
# Log training progress
if curr_step > 0 and curr_step % FLAGS.log_steps == 0:
curr_loss = total_loss / (curr_step - prev_step)
summ = tb.run_train(sess,
training_performance_summaries,
curr_loss)
train_summary_writer.add_summary(summ, curr_step)
tf.logging.info(
"[{}] | gnorm {:.2f} lr {:8.6f} "
"| loss {:.2f} | pplx {:>7.2f}, bpc {:>7.4f}".
format(curr_step, fetched[-3], fetched[-2],
curr_loss, math.exp(curr_loss),
curr_loss / math.log(2)))
total_loss, prev_step = 0., curr_step
# Save checkpoint
if curr_step > 0 and FLAGS.save_steps is not None and curr_step % FLAGS.save_steps == 0:
save_path = os.path.join(FLAGS.model_dir, "model.ckpt")
saver.save(sess, save_path)
tf.logging.info(
"Model saved in path: {}".format(save_path))
except tf.errors.OutOfRangeError:
pass
# Validation loop
try:
sess.run(v_iter.initializer)
v_total_loss, v_steps = 0., 0
while True:
v_feed_dict = {}
for i in range(FLAGS.num_core_per_host):
for key in v_tower_mems_np[i].keys():
for m, m_np in zip(v_tower_mems[i][key],
v_tower_mems_np[i][key]):
v_feed_dict[m] = m_np
v_fetched = sess.run(v_fetches, feed_dict=v_feed_dict)
v_loss_np, v_tower_mems_np = v_fetched[:]
v_total_loss += v_loss_np
v_steps += 1
except tf.errors.OutOfRangeError:
val_loss = v_total_loss / v_steps
v_pplx = math.exp(val_loss)
tf.logging.info(
"Validation: [{}] | loss {:.2f} | pplx {:>7.2f}".format(
curr_step, val_loss, v_pplx))
summ_valid = tb.run_valid(sess, valid_performance_summaries,
val_loss, v_pplx)
valid_summary_writer.add_summary(summ_valid, curr_step)
tf.logging.info("------------ Epoch {} ------------".format(i))
def model_fn(features, labels, mode, params):
#### Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
#### Get loss from inputs
if FLAGS.is_regression:
(total_loss, per_example_loss,
logits) = function_builder.get_regression_loss(
FLAGS, features, is_training)
else:
(total_loss, per_example_loss,
logits) = function_builder.get_classification_loss(
FLAGS, features, n_class, is_training)
#### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info('#params: {}'.format(num_params))
#### load pretrained models
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
#### Evaluation mode
if mode == tf.estimator.ModeKeys.EVAL:
assert FLAGS.num_hosts == 1
def metric_fn(per_example_loss, label_ids, logits,
is_real_example):
predictions = tf.argmax(logits, axis=-1, output_type=tf.int32)
eval_input_dict = {
'labels': label_ids,
'predictions': predictions,
'weights': is_real_example
}
accuracy = tf.metrics.accuracy(**eval_input_dict)
loss = tf.metrics.mean(values=per_example_loss,
weights=is_real_example)
f1 = tf.contrib.metrics.f1_score(label_ids, predictions)
#print('Label ids object type: {}'.format(type(label_ids)))
#print('Predictions object type: {}'.format(type(predictions)))
'''
cm = tf.math.confusion_matrix(label_ids,predictions,num_classes=n_class)
print('Converting confusion matrix into its values.')
sess = tf.Session()
sess.run(tf.global_variables_initializer())
sess.run(tf.local_variables_initializer())
_cm = sess.run(cm)
sess.close()
print("Created value of confusion matrix: {}".format(_cm))
'''
'''
sess = tf.Session()
#sess.run(tf.global_variables_initializer())
_cm = sess.run(cm)
sess.close()
print("Created value of confusion matrix: {}".format(_cm))
'''
'''
This giant part below was supposed to calculate f1 precision etc but it failed because eval() and run() gives error.
Error:
tensorflow.python.framework.errors_impl.FailedPreconditionError: GetNext() failed because the iterator has not been initialized. Ensure that you have run the initializer operation for this iterator before getting the next element.
[[node IteratorGetNext (defined at content/drive/My Drive/thesis/xlnet/run_classifier.py:866
'''
'''
sess = tf.InteractiveSession()
label_ids_np=label_ids.eval()
predictions_np = predictions.eval()
sess.close()
print('Conversion succeeded.')
print('Label_ids_np type: {}'.format(type(label_ids_np)))
print('Predictions_np type: {}'.format(type(predictions_np)))
sess = tf.InteractiveSession()
print('Tf conversion: from {} to {} '.format(type(tf.constant([1,2,3])),type(tf.constant([1,2,3]).eval())))
sess.close()
#precision, recall, f1, _ = precision_recall_fscore_support(label_ids, predictions, average="macro", labels=list(range(0,n_class)))
#mcc = matthews_corrcoef(label_ids_np, predictions_np)
sess = tf.get_default_session()
with sess.as_default():
label_ids_np = label_ids.eval()
predictions_np = predictions.eval()
sess = tf.Session()
sess.run(tf.global_variables_initializer())
label_ids_np = sess.run(label_ids)
predictions_np = sess.run(predictions)
sess.close()
precision_macro = scu.get_precision_macro(label_ids_np,predictions_np)
recall_macro = scu.get_recall_macro(label_ids_np,predictions_np)
f1_macro = scu.get_f1_macro(label_ids_np,predictions_np)
mcc = scu.get_mcc_score(label_ids_np,predictions_np)
print(f1_macro)
print(mcc)
'''
return {'eval_accuracy': accuracy, 'eval_loss': loss, 'f1': f1}
def regression_metric_fn(per_example_loss, label_ids, logits,
is_real_example):
loss = tf.metrics.mean(values=per_example_loss,
weights=is_real_example)
pearsonr = tf.contrib.metrics.streaming_pearson_correlation(
logits, label_ids, weights=is_real_example)
return {'eval_loss': loss, 'eval_pearsonr': pearsonr}
is_real_example = tf.cast(features["is_real_example"],
dtype=tf.float32)
#### Constucting evaluation TPUEstimatorSpec with new cache.
label_ids = tf.reshape(features['label_ids'], [-1])
if FLAGS.is_regression:
metric_fn = regression_metric_fn
else:
metric_fn = metric_fn
metric_args = [
per_example_loss, label_ids, logits, is_real_example
]
if FLAGS.use_tpu:
eval_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
eval_metrics=(metric_fn, metric_args),
scaffold_fn=scaffold_fn)
else:
eval_spec = tf.estimator.EstimatorSpec(
mode=mode,
loss=total_loss,
eval_metric_ops=metric_fn(*metric_args))
return eval_spec
elif mode == tf.estimator.ModeKeys.PREDICT:
label_ids = tf.reshape(features["label_ids"], [-1])
predictions = {
"logits": logits,
"labels": label_ids,
"is_real": features["is_real_example"]
}
if FLAGS.use_tpu:
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
predictions=predictions,
scaffold_fn=scaffold_fn)
else:
output_spec = tf.estimator.EstimatorSpec(
mode=mode, predictions=predictions)
return output_spec
#### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(
FLAGS, total_loss)
monitor_dict = {}
monitor_dict["lr"] = learning_rate
#### Constucting training TPUEstimatorSpec with new cache.
if FLAGS.use_tpu:
#### Creating host calls
if not FLAGS.is_regression:
label_ids = tf.reshape(features['label_ids'], [-1])
predictions = tf.argmax(logits,
axis=-1,
output_type=label_ids.dtype)
is_correct = tf.equal(predictions, label_ids)
accuracy = tf.reduce_mean(tf.cast(is_correct, tf.float32))
monitor_dict["accuracy"] = accuracy
host_call = function_builder.construct_scalar_host_call(
monitor_dict=monitor_dict,
model_dir=FLAGS.model_dir,
prefix="train/",
reduce_fn=tf.reduce_mean)
else:
host_call = None
train_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
train_op=train_op,
host_call=host_call,
scaffold_fn=scaffold_fn)
else:
train_spec = tf.estimator.EstimatorSpec(mode=mode,
loss=total_loss,
train_op=train_op)
return train_spec
def main(_):
if FLAGS.server_ip and FLAGS.server_port:
# Distant debugging - see https://code.visualstudio.com/docs/python/debugging#_attach-to-a-local-script
import ptvsd
print("Waiting for debugger attach")
ptvsd.enable_attach(address=(FLAGS.server_ip, FLAGS.server_port),
redirect_output=True)
ptvsd.wait_for_attach()
tf.set_random_seed(FLAGS.seed)
np.random.seed(FLAGS.seed)
tf.logging.set_verbosity(tf.logging.INFO)
#### Validate flags
if FLAGS.save_steps is not None:
FLAGS.log_step_count_steps = min(FLAGS.log_step_count_steps,
FLAGS.save_steps)
if FLAGS.do_predict:
predict_dir = FLAGS.predict_dir
if not tf.gfile.Exists(predict_dir):
tf.gfile.MakeDirs(predict_dir)
processors = {
"mnli_matched": MnliMatchedProcessor,
"mnli_mismatched": MnliMismatchedProcessor,
'sts-b': StsbProcessor,
'imdb': ImdbProcessor,
"yelp5": Yelp5Processor
}
if not FLAGS.do_train and not FLAGS.do_eval and not FLAGS.do_predict:
raise ValueError(
"At least one of `do_train`, `do_eval, `do_predict` or "
"`do_submit` must be True.")
if not tf.gfile.Exists(FLAGS.output_dir):
tf.gfile.MakeDirs(FLAGS.output_dir)
if not tf.gfile.Exists(FLAGS.model_dir):
tf.gfile.MakeDirs(FLAGS.model_dir)
# ########################### LOAD PT model
# ########################### LOAD PT model
# import torch
# from pytorch_transformers import CONFIG_NAME, TF_WEIGHTS_NAME, XLNetTokenizer, XLNetConfig, XLNetForSequenceClassification
# save_path = os.path.join(FLAGS.model_dir, TF_WEIGHTS_NAME)
# tf.logging.info("Model loaded from path: {}".format(save_path))
# device = torch.device("cuda", 4)
# config = XLNetConfig.from_pretrained('xlnet-large-cased', finetuning_task=u'sts-b')
# config_path = os.path.join(FLAGS.model_dir, CONFIG_NAME)
# config.to_json_file(config_path)
# pt_model = XLNetForSequenceClassification.from_pretrained(FLAGS.model_dir, from_tf=True, num_labels=1)
# pt_model.to(device)
# pt_model = torch.nn.DataParallel(pt_model, device_ids=[4, 5, 6, 7])
# from torch.optim import Adam
# optimizer = Adam(pt_model.parameters(), lr=0.001, betas=(0.9, 0.999),
# eps=FLAGS.adam_epsilon, weight_decay=FLAGS.weight_decay,
# amsgrad=False)
# ########################### LOAD PT model
# ########################### LOAD PT model
task_name = FLAGS.task_name.lower()
if task_name not in processors:
raise ValueError("Task not found: %s" % (task_name))
processor = processors[task_name]()
label_list = processor.get_labels() if not FLAGS.is_regression else None
sp = spm.SentencePieceProcessor()
sp.Load(FLAGS.spiece_model_file)
def tokenize_fn(text):
text = preprocess_text(text, lower=FLAGS.uncased)
return encode_ids(sp, text)
# run_config = model_utils.configure_tpu(FLAGS)
# model_fn = get_model_fn(len(label_list) if label_list is not None else None)
spm_basename = os.path.basename(FLAGS.spiece_model_file)
# If TPU is not available, this will fall back to normal Estimator on CPU
# or GPU.
# estimator = tf.estimator.Estimator(
# model_fn=model_fn,
# config=run_config)
if FLAGS.do_train:
train_file_base = "{}.len-{}.train.tf_record".format(
spm_basename, FLAGS.max_seq_length)
train_file = os.path.join(FLAGS.output_dir, train_file_base)
tf.logging.info("Use tfrecord file {}".format(train_file))
train_examples = processor.get_train_examples(FLAGS.data_dir)
tf.logging.info("Num of train samples: {}".format(len(train_examples)))
file_based_convert_examples_to_features(train_examples, label_list,
FLAGS.max_seq_length,
tokenize_fn, train_file,
FLAGS.num_passes)
train_input_fn = file_based_input_fn_builder(
input_file=train_file,
seq_length=FLAGS.max_seq_length,
is_training=True,
drop_remainder=True)
# estimator.train(input_fn=train_input_fn, max_steps=FLAGS.train_steps)
##### Create input tensors / placeholders
bsz_per_core = FLAGS.train_batch_size // FLAGS.num_core_per_host
params = {
"batch_size": FLAGS.train_batch_size # the whole batch
}
train_set = train_input_fn(params)
example = train_set.make_one_shot_iterator().get_next()
if FLAGS.num_core_per_host > 1:
examples = [{} for _ in range(FLAGS.num_core_per_host)]
for key in example.keys():
vals = tf.split(example[key], FLAGS.num_core_per_host, 0)
for device_id in range(FLAGS.num_core_per_host):
examples[device_id][key] = vals[device_id]
else:
examples = [example]
##### Create computational graph
tower_losses, tower_grads_and_vars, tower_inputs, tower_hidden_states, tower_logits = [], [], [], [], []
for i in range(FLAGS.num_core_per_host):
reuse = True if i > 0 else None
with tf.device(assign_to_gpu(i, "/gpu:0")), \
tf.variable_scope(tf.get_variable_scope(), reuse=reuse):
loss_i, grads_and_vars_i, inputs_i, hidden_states_i, logits_i = single_core_graph(
is_training=True,
features=examples[i],
label_list=label_list)
tower_losses.append(loss_i)
tower_grads_and_vars.append(grads_and_vars_i)
tower_inputs.append(inputs_i)
tower_hidden_states.append(hidden_states_i)
tower_logits.append(logits_i)
## average losses and gradients across towers
if len(tower_losses) > 1:
loss = tf.add_n(tower_losses) / len(tower_losses)
grads_and_vars = average_grads_and_vars(tower_grads_and_vars)
inputs = dict((n, tf.concat([t[n] for t in tower_inputs], 0))
for n in tower_inputs[0])
hidden_states = list(
tf.concat(t, 0) for t in zip(*tower_hidden_states))
logits = tf.concat(tower_logits, 0)
else:
loss = tower_losses[0]
grads_and_vars = tower_grads_and_vars[0]
inputs = tower_inputs[0]
hidden_states = tower_hidden_states[0]
logits = tower_logits[0]
# Summaries
merged = tf.summary.merge_all()
## get train op
train_op, learning_rate, gnorm = model_utils.get_train_op(
FLAGS, None, grads_and_vars=grads_and_vars)
global_step = tf.train.get_global_step()
##### Training loop
saver = tf.train.Saver(max_to_keep=FLAGS.max_save)
gpu_options = tf.GPUOptions(allow_growth=True)
#### load pretrained models
model_utils.init_from_checkpoint(FLAGS, global_vars=True)
writer = tf.summary.FileWriter(logdir=FLAGS.model_dir,
graph=tf.get_default_graph())
with tf.Session(config=tf.ConfigProto(
allow_soft_placement=True, gpu_options=gpu_options)) as sess:
sess.run(tf.global_variables_initializer())
#########
##### PYTORCH
import torch
from torch.optim import Adam
from pytorch_transformers import CONFIG_NAME, TF_WEIGHTS_NAME, WEIGHTS_NAME, XLNetTokenizer, XLNetConfig, XLNetForSequenceClassification, BertAdam
save_path = os.path.join(FLAGS.model_dir, TF_WEIGHTS_NAME + '-00')
saver.save(sess, save_path)
tf.logging.info("Model saved in path: {}".format(save_path))
device = torch.device("cuda", 4)
config = XLNetConfig.from_pretrained('xlnet-large-cased',
finetuning_task=u'sts-b',
num_labels=1)
tokenizer = XLNetTokenizer.from_pretrained('xlnet-large-cased')
# pt_model = XLNetForSequenceClassification.from_pretrained('xlnet-large-cased', num_labels=1)
pt_model = XLNetForSequenceClassification.from_pretrained(
save_path, from_tf=True, config=config)
pt_model.to(device)
pt_model = torch.nn.DataParallel(pt_model, device_ids=[4, 5, 6, 7])
optimizer = Adam(pt_model.parameters(),
lr=0.001,
betas=(0.9, 0.999),
eps=FLAGS.adam_epsilon,
weight_decay=FLAGS.weight_decay,
amsgrad=False)
# optimizer = BertAdam(pt_model.parameters(), lr=FLAGS.learning_rate, t_total=FLAGS.train_steps, warmup=FLAGS.warmup_steps / FLAGS.train_steps,
# eps=FLAGS.adam_epsilon, weight_decay=FLAGS.weight_decay)
##### PYTORCH
#########
fetches = [
loss, global_step, gnorm, learning_rate, train_op, merged,
inputs, hidden_states, logits
]
total_loss, total_loss_pt, prev_step, gnorm_pt = 0., 0., -1, 0.0
total_logits = None
total_labels = None
while True:
feed_dict = {}
# for i in range(FLAGS.num_core_per_host):
# for key in tower_mems_np[i].keys():
# for m, m_np in zip(tower_mems[i][key], tower_mems_np[i][key]):
# feed_dict[m] = m_np
fetched = sess.run(fetches)
loss_np, curr_step, gnorm_np, learning_rate_np, _, summary_np, inputs_np, hidden_states_np, logits_np = fetched
total_loss += loss_np
if total_logits is None:
total_logits = logits_np
total_labels = inputs_np['label_ids']
else:
total_logits = np.append(total_logits, logits_np, axis=0)
total_labels = np.append(total_labels,
inputs_np['label_ids'],
axis=0)
#########
##### PYTORCH
f_inp = torch.tensor(inputs_np["input_ids"],
dtype=torch.long,
device=device)
f_seg_id = torch.tensor(inputs_np["segment_ids"],
dtype=torch.long,
device=device)
f_inp_mask = torch.tensor(inputs_np["input_mask"],
dtype=torch.float,
device=device)
f_label = torch.tensor(inputs_np["label_ids"],
dtype=torch.float,
device=device)
# with torch.no_grad():
# _, hidden_states_pt, _ = pt_model.transformer(f_inp, f_seg_id, f_inp_mask)
# logits_pt, _ = pt_model(f_inp, token_type_ids=f_seg_id, input_mask=f_inp_mask)
pt_model.train()
outputs = pt_model(f_inp,
token_type_ids=f_seg_id,
input_mask=f_inp_mask,
labels=f_label)
loss_pt = outputs[0]
loss_pt = loss_pt.mean()
total_loss_pt += loss_pt.item()
# # hidden_states_pt = list(t.detach().cpu().numpy() for t in hidden_states_pt)
# # special_pt = special_pt.detach().cpu().numpy()
# # Optimizer pt
pt_model.zero_grad()
loss_pt.backward()
gnorm_pt = torch.nn.utils.clip_grad_norm_(
pt_model.parameters(), FLAGS.clip)
for param_group in optimizer.param_groups:
param_group['lr'] = learning_rate_np
optimizer.step()
##### PYTORCH
#########
if curr_step > 0 and curr_step % FLAGS.log_step_count_steps == 0:
curr_loss = total_loss / (curr_step - prev_step)
curr_loss_pt = total_loss_pt / (curr_step - prev_step)
tf.logging.info(
"[{}] | gnorm {:.2f} lr {:8.6f} "
"| loss {:.2f} | pplx {:>7.2f}, bpc {:>7.4f}".format(
curr_step, gnorm_np, learning_rate_np, curr_loss,
math.exp(curr_loss), curr_loss / math.log(2)))
#########
##### PYTORCH
tf.logging.info(
" PT [{}] | gnorm PT {:.2f} lr PT {:8.6f} "
"| loss PT {:.2f} | pplx PT {:>7.2f}, bpc PT {:>7.4f}".
format(curr_step, gnorm_pt, learning_rate_np,
curr_loss_pt, math.exp(curr_loss_pt),
curr_loss_pt / math.log(2)))
##### PYTORCH
#########
total_loss, total_loss_pt, prev_step = 0., 0., curr_step
writer.add_summary(summary_np, global_step=curr_step)
if curr_step > 0 and curr_step % FLAGS.save_steps == 0:
save_path = os.path.join(FLAGS.model_dir,
"model.ckpt-{}".format(curr_step))
saver.save(sess, save_path)
tf.logging.info(
"Model saved in path: {}".format(save_path))
#########
##### PYTORCH
# Save a trained model, configuration and tokenizer
model_to_save = pt_model.module if hasattr(
pt_model,
'module') else pt_model # Only save the model it-self
# If we save using the predefined names, we can load using `from_pretrained`
output_dir = os.path.join(
FLAGS.output_dir, "pytorch-ckpt-{}".format(curr_step))
if not tf.gfile.Exists(output_dir):
tf.gfile.MakeDirs(output_dir)
model_to_save.save_pretrained(output_dir)
tokenizer.save_pretrained(output_dir)
tf.logging.info(
"PyTorch Model saved in path: {}".format(output_dir))
##### PYTORCH
#########
if curr_step >= FLAGS.train_steps:
break
if FLAGS.do_eval:
# TPU requires a fixed batch size for all batches, therefore the number
# of examples must be a multiple of the batch size, or else examples
# will get dropped. So we pad with fake examples which are ignored
# later on. These do NOT count towards the metric (all tf.metrics
# support a per-instance weight, and these get a weight of 0.0).
#
# Modified in XL: We also adopt the same mechanism for GPUs.
while len(eval_examples) % FLAGS.eval_batch_size != 0:
eval_examples.append(PaddingInputExample())
eval_file_base = "{}.len-{}.{}.eval.tf_record".format(
spm_basename, FLAGS.max_seq_length, FLAGS.eval_split)
eval_file = os.path.join(FLAGS.output_dir, eval_file_base)
file_based_convert_examples_to_features(eval_examples, label_list,
FLAGS.max_seq_length,
tokenize_fn, eval_file)
assert len(eval_examples) % FLAGS.eval_batch_size == 0
eval_steps = int(len(eval_examples) // FLAGS.eval_batch_size)
eval_input_fn = file_based_input_fn_builder(
input_file=eval_file,
seq_length=FLAGS.max_seq_length,
is_training=False,
drop_remainder=True)
with tf.Session(config=tf.ConfigProto(
allow_soft_placement=True, gpu_options=gpu_options)) as sess:
sess.run(tf.global_variables_initializer())
########################### LOAD PT model
# import torch
# from pytorch_transformers import CONFIG_NAME, TF_WEIGHTS_NAME, WEIGHTS_NAME, XLNetTokenizer, XLNetConfig, XLNetForSequenceClassification, BertAdam
# save_path = os.path.join(FLAGS.model_dir, TF_WEIGHTS_NAME)
# saver.save(sess, save_path)
# tf.logging.info("Model saved in path: {}".format(save_path))
# device = torch.device("cuda", 4)
# config = XLNetConfig.from_pretrained('xlnet-large-cased', finetuning_task=u'sts-b', num_labels=1)
# tokenizer = XLNetTokenizer.from_pretrained('xlnet-large-cased')
# config_path = os.path.join(FLAGS.model_dir, CONFIG_NAME)
# config.to_json_file(config_path)
# # pt_model = XLNetForSequenceClassification.from_pretrained('xlnet-large-cased', num_labels=1)
# pt_model = XLNetForSequenceClassification.from_pretrained(FLAGS.model_dir, from_tf=True)
# pt_model.to(device)
# pt_model = torch.nn.DataParallel(pt_model, device_ids=[4, 5, 6, 7])
# from torch.optim import Adam
# optimizer = Adam(pt_model.parameters(), lr=0.001, betas=(0.9, 0.999),
# eps=FLAGS.adam_epsilon, weight_decay=FLAGS.weight_decay,
# amsgrad=False)
# optimizer = BertAdam(pt_model.parameters(), lr=FLAGS.learning_rate, t_total=FLAGS.train_steps, warmup=FLAGS.warmup_steps / FLAGS.train_steps,
# eps=FLAGS.adam_epsilon, weight_decay=FLAGS.weight_decay)
##### PYTORCH
#########
fetches = [
loss, global_step, gnorm, learning_rate, train_op, merged,
inputs, hidden_states, logits
]
total_loss, total_loss_pt, prev_step, gnorm_pt = 0., 0., -1, 0.0
total_logits = None
total_labels = None
while True:
feed_dict = {}
# for i in range(FLAGS.num_core_per_host):
# for key in tower_mems_np[i].keys():
# for m, m_np in zip(tower_mems[i][key], tower_mems_np[i][key]):
# feed_dict[m] = m_np
fetched = sess.run(fetches)
loss_np, curr_step, gnorm_np, learning_rate_np, _, summary_np, inputs_np, hidden_states_np, logits_np = fetched
total_loss += loss_np
if total_logits is None:
total_logits = logits_np
total_labels = inputs_np['label_ids']
else:
total_logits = np.append(total_logits, logits_np, axis=0)
total_labels = np.append(total_labels,
inputs_np['label_ids'],
axis=0)
def model_fn(features, labels, mode, params):
# ### Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
# ### Get loss from inputs
sep_layer = FLAGS.sep_layer
if FLAGS.supervise:
FLAGS.sep_layer = 0 # teacher sep at 0
logger.info('supervise decompose layer: {}'.format(FLAGS.sep_layer))
with tf.variable_scope("teacher", reuse=tf.AUTO_REUSE):
teacher_outputs = get_decomposed_qa_outputs(
FLAGS, features, is_training)
else:
teacher_outputs = None
if FLAGS.decompose:
FLAGS.sep_layer = sep_layer
logger.info('decompose at layer: {}'.format(FLAGS.sep_layer))
outputs = get_decomposed_qa_outputs(FLAGS, features, is_training)
else:
logger.info('running in normal mode')
outputs = get_qa_outputs(FLAGS, features, is_training)
# ### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
logger.info('#params: {}'.format(num_params))
scaffold_fn = None
# ### Evaluation mode
if mode == tf.estimator.ModeKeys.PREDICT:
if FLAGS.init_checkpoint:
logger.info(
"init_checkpoint not being used in predict mode.")
predictions = {
"feature_id": features["feature_id"],
"start_logits": outputs["start_logits"],
"end_logits": outputs["end_logits"],
"cls_logits": outputs["cls_logits"]
}
if FLAGS.use_tpu:
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode, predictions=predictions, scaffold_fn=scaffold_fn)
else:
output_spec = tf.estimator.EstimatorSpec(
mode=mode, predictions=predictions)
return output_spec
# ## Compute loss
seq_length = FLAGS.max_seq_length
def compute_loss(log_probs, positions, depth=seq_length):
one_hot_positions = tf.one_hot(
positions, depth=depth, dtype=tf.float32)
loss = - tf.reduce_sum(one_hot_positions * log_probs, axis=-1)
loss = tf.reduce_mean(loss)
return loss
start_loss = compute_loss(
outputs["start_log_probs"], features["answer_start"])
end_loss = compute_loss(
outputs["end_log_probs"], features["answer_end"])
total_loss = (start_loss + end_loss) * 0.5
cls_loss = compute_loss(
outputs["cls_log_probs"], features["cls"], depth=FLAGS.num_classes)
# note(zhiliny): by default multiply the loss by 0.5 so that
# the scale is comparable to start_loss and end_loss
total_loss += cls_loss * 0.5
monitor_dict = {"loss/start": start_loss,
"loss/end": end_loss,
"loss/cls": cls_loss,
'loss/ce': total_loss}
if teacher_outputs is not None:
ce_loss = total_loss
gamma = FLAGS.ll_gamma
alpha = FLAGS.dl_alpha
beta = FLAGS.ul_beta
# supervise upper and logits
temp = FLAGS.temperature
kd_loss = get_distill_loss(teacher_outputs, outputs, temp)
mse_loss = get_upper_loss(teacher_outputs, outputs)
monitor_dict["loss/kd"] = kd_loss
monitor_dict["loss/mse"] = mse_loss
total_loss = gamma * ce_loss + alpha * kd_loss + beta * mse_loss
# ### Configuring the optimizer
all_trainable_variables = tf.trainable_variables()
# set fine tune scope
if FLAGS.tune_scopes:
tune_scopes = FLAGS.tune_scopes.split(',')
else:
tune_scopes = None
logger.info('tune_scopes: {}'.format(tune_scopes))
if isinstance(tune_scopes, list):
scoped_variables = []
for scope in tune_scopes:
scoped_variables.extend(tf.trainable_variables(scope))
trainable_variables = scoped_variables
else:
trainable_variables = all_trainable_variables
if FLAGS.init_scopes:
init_scopes = FLAGS.init_scopes.split(',')
else:
init_scopes = None
logger.info('init_scopes: {}'.format(init_scopes))
if isinstance(init_scopes, list):
to_be_init_variables = []
for scope in init_scopes:
to_be_init_variables.extend(tf.trainable_variables(scope))
else:
to_be_init_variables = all_trainable_variables
initialized_variable_names = {}
scaffold_fn = None
# ### load pretrained models
init_checkpoint = FLAGS.init_checkpoint
if init_checkpoint:
logger.info("Initialize from the ckpt {}".format(init_checkpoint))
assign_map, initialized_variable_names = my_init_from_checkpoint(
init_checkpoint, to_be_init_variables)
# logger.info('assign_map: \n{}'.format(assign_map))
# logger.info('initialized_variable_names: \n{}'.format(
# initialized_variable_names))
if FLAGS.use_tpu:
def tpu_scaffold():
tf.train.init_from_checkpoint(init_checkpoint, assign_map)
return tf.train.Scaffold()
scaffold_fn = tpu_scaffold
else:
tf.train.init_from_checkpoint(init_checkpoint, assign_map)
logger.info("**** Initialized Variables ****")
for var in to_be_init_variables:
init_str = ""
if var.name in initialized_variable_names:
init_str = ", *INIT*"
logger.info(" name=%s, shape=%s%s",
var.name, var.shape, init_str)
if mode == tf.estimator.ModeKeys.TRAIN:
logger.info("**** Trainable Variables ****")
for var in trainable_variables:
init_str = ""
if var.name in initialized_variable_names:
init_str = ", *INIT_AND_TRAINABLE*"
logger.info("*TRAINABLE* name=%s, shape=%s%s",
var.name, var.shape, init_str)
train_op, learning_rate, _ = get_train_op(
FLAGS, total_loss, trainable_variables=trainable_variables)
monitor_dict["lr"] = learning_rate
# ### Constucting training TPUEstimatorSpec with new cache.
if FLAGS.use_tpu:
host_call = construct_scalar_host_call(
monitor_dict=monitor_dict,
model_dir=FLAGS.model_dir,
prefix="train/",
reduce_fn=tf.reduce_mean)
train_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode, loss=total_loss, train_op=train_op,
host_call=host_call,
scaffold_fn=scaffold_fn)
else:
train_spec = tf.estimator.EstimatorSpec(
mode=mode, loss=total_loss, train_op=train_op)
return train_spec
def model_fn(features, labels, mode, params):
# Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
total_loss, per_example_loss, logits, label, mask = function_builder.get_crf_outputs(
FLAGS, features, is_training)
# Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info('#params: {}'.format(num_params))
# predict mode
if mode == tf.estimator.ModeKeys.PREDICT:
predictions = {
"logits": logits,
"labels": label,
'mask': features['input_mask'],
'label_mask': mask
}
output_spec = tf.estimator.EstimatorSpec(mode=mode,
predictions=predictions)
return output_spec
# Evaluation mode
elif mode == tf.estimator.ModeKeys.EVAL:
assert FLAGS.num_hosts == 1
def metric_fn(per_example_loss, label_ids, logits, weight):
eval_input_dict = {
'labels': label_ids,
'predictions': logits,
'weights': weight
}
accuracy = tf.metrics.accuracy(**eval_input_dict)
eval_input_dict = {
'labels': tf.one_hot(label_ids, FLAGS.crf_classes),
'predictions': tf.one_hot(logits, FLAGS.crf_classes),
'weights': weight
}
f1 = tf.contrib.metrics.f1_score(**eval_input_dict)
loss = tf.metrics.mean(values=per_example_loss)
return {'eval_accuracy': accuracy, 'eval_loss': loss, 'f1': f1}
metric_args = [per_example_loss, label, logits, mask]
eval_spec = tf.estimator.EstimatorSpec(
mode=mode,
loss=total_loss,
eval_metric_ops=metric_fn(*metric_args))
return eval_spec
# load pretrained models
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
#### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(
FLAGS, total_loss)
train_spec = tf.estimator.EstimatorSpec(mode=mode,
loss=total_loss,
train_op=train_op)
return train_spec
def train(ps_device):
##### Get input function and model function
train_input_fn, record_info_dict = data_utils.get_input_fn(
tfrecord_dir=FLAGS.record_info_dir,
split="train",
bsz_per_host=FLAGS.train_batch_size,
seq_len=FLAGS.seq_len,
reuse_len=FLAGS.reuse_len,
bi_data=FLAGS.bi_data,
num_hosts=1,
num_core_per_host=1, # set to one no matter how many GPUs
perm_size=FLAGS.perm_size,
mask_alpha=FLAGS.mask_alpha,
mask_beta=FLAGS.mask_beta,
uncased=FLAGS.uncased,
num_passes=FLAGS.num_passes,
use_bfloat16=FLAGS.use_bfloat16,
num_predict=FLAGS.num_predict)
# for key, info in record_info_dict.items():
tf.compat.v1.logging.info("num of batches {}".format(record_info_dict["num_batch"]))
##### Create input tensors / placeholders
bsz_per_core = FLAGS.train_batch_size // FLAGS.num_core_per_host
params = {
"batch_size": FLAGS.train_batch_size # the whole batch
}
train_set = train_input_fn(params)
example = train_set.make_one_shot_iterator().get_next()
if FLAGS.num_core_per_host > 1:
examples = [{} for _ in range(FLAGS.num_core_per_host)]
for key in example.keys():
vals = tf.split(example[key], FLAGS.num_core_per_host, 0)
for device_id in range(FLAGS.num_core_per_host):
examples[device_id][key] = vals[device_id]
else:
examples = [example]
##### Create computational graph
tower_mems, tower_losses, tower_new_mems, tower_grads_and_vars = [], [], [], []
for i in range(FLAGS.num_core_per_host):
reuse = True if i > 0 else None
with tf.device(assign_to_gpu(i, ps_device)), \
tf.variable_scope(tf.get_variable_scope(), reuse=reuse):
# The mems for each tower is a dictionary
mems_i = {}
if FLAGS.mem_len:
mems_i["mems"] = create_mems_tf(bsz_per_core)
loss_i, new_mems_i, grads_and_vars_i = single_core_graph(
is_training=True,
features=examples[i],
mems=mems_i)
tower_mems.append(mems_i)
tower_losses.append(loss_i)
tower_new_mems.append(new_mems_i)
tower_grads_and_vars.append(grads_and_vars_i)
## average losses and gradients across towers
if len(tower_losses) > 1:
loss = tf.add_n(tower_losses) / len(tower_losses)
grads_and_vars = average_grads_and_vars(tower_grads_and_vars)
else:
loss = tower_losses[0]
grads_and_vars = tower_grads_and_vars[0]
## get train op
train_op, learning_rate, gnorm = model_utils.get_train_op(FLAGS, None,
grads_and_vars=grads_and_vars)
global_step = tf.train.get_global_step()
##### Training loop
# initialize mems
tower_mems_np = []
for i in range(FLAGS.num_core_per_host):
mems_i_np = {}
for key in tower_mems[i].keys():
mems_i_np[key] = initialize_mems_np(bsz_per_core)
tower_mems_np.append(mems_i_np)
saver = tf.train.Saver()
gpu_options = tf.GPUOptions(allow_growth=True)
model_utils.init_from_checkpoint(FLAGS, global_vars=True)
with tf.Session(config=tf.ConfigProto(allow_soft_placement=True,
gpu_options=gpu_options)) as sess:
sess.run(tf.global_variables_initializer())
fetches = [loss, tower_new_mems, global_step, gnorm, learning_rate, train_op]
total_loss, prev_step = 0., -1
while True:
feed_dict = {}
for i in range(FLAGS.num_core_per_host):
for key in tower_mems_np[i].keys():
for m, m_np in zip(tower_mems[i][key], tower_mems_np[i][key]):
feed_dict[m] = m_np
fetched = sess.run(fetches, feed_dict=feed_dict)
loss_np, tower_mems_np, curr_step = fetched[:3]
total_loss += loss_np
if curr_step > 0 and curr_step % FLAGS.iterations == 0:
curr_loss = total_loss / (curr_step - prev_step)
tf.compat.v1.logging.info("[{}] | gnorm {:.2f} lr {:8.6f} "
"| loss {:.2f} | pplx {:>7.2f}, bpc {:>7.4f}".format(
curr_step, fetched[-3], fetched[-2],
curr_loss, math.exp(curr_loss), curr_loss / math.log(2)))
total_loss, prev_step = 0., curr_step
if curr_step > 0 and curr_step % FLAGS.save_steps == 0:
save_path = os.path.join(FLAGS.model_dir, "model.ckpt")
saver.save(sess, save_path)
tf.compat.v1.logging.info("Model saved in path: {}".format(save_path))
if curr_step >= FLAGS.train_steps:
break
def model_fn(features, labels, mode, params):
#### Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
#### Get loss from inputs
if FLAGS.is_regression:
(total_loss, per_example_loss,
logits) = function_builder.get_regression_loss(
FLAGS, features, is_training)
else:
flag_val_dict = {
"dropout": FLAGS.dropout,
"model_dir": FLAGS.model_dir,
"data_dir": FLAGS.data_dir,
"use_tpu": FLAGS.use_tpu,
"num_core_per_host": FLAGS.num_core_per_host,
"master": FLAGS.master,
"iterations": FLAGS.iterations,
"learning_rate": FLAGS.learning_rate,
"train_batch_size": FLAGS.train_batch_size,
"model_config_path": FLAGS.model_config_path,
}
for name in list(features.keys()):
t = features[name]
if t.dtype == tf.int64:
t = tf.cast(t, tf.int32)
features[name] = t
tf.logging.info(json.dumps(flag_val_dict))
(total_loss, per_example_loss, logits,
probabilities) = function_builder.get_classification_loss(
FLAGS, features, n_class, is_training)
#### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info('#params: {}'.format(num_params))
#### load pretrained models
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
#### Evaluation mode
if mode == tf.estimator.ModeKeys.EVAL:
assert FLAGS.num_hosts == 1
def metric_fn(per_example_loss, label_ids, logits,
is_real_example):
predictions = tf.argmax(logits, axis=-1, output_type=tf.int32)
eval_input_dict = {
'labels': label_ids,
'predictions': predictions,
'weights': is_real_example
}
accuracy = tf.metrics.accuracy(**eval_input_dict)
loss = tf.metrics.mean(values=per_example_loss,
weights=is_real_example)
###################################
# precision,recall, f1 score #
###################################
precision = metrics.precision(label_ids,
predictions,
20,
average="macro")
recall = metrics.recall(label_ids,
predictions,
20,
average="macro")
f = metrics.f1(label_ids, predictions, 20, average="macro")
###################################
# confusion matrix #
###################################
def eval_confusion_matrix(labels, predictions, num_classes):
with tf.variable_scope("eval_confusion_matrix"):
con_matrix = tf.confusion_matrix(
labels=labels,
predictions=predictions,
num_classes=num_classes)
con_matrix_sum = tf.Variable(
tf.zeros(shape=(num_classes, num_classes),
dtype=tf.int32),
trainable=False,
name="confusion_matrix_result",
collections=[tf.GraphKeys.LOCAL_VARIABLES])
update_op = tf.assign_add(con_matrix_sum, con_matrix)
return tf.convert_to_tensor(con_matrix_sum), update_op
return {
'eval_accuracy':
accuracy,
'eval_loss':
loss,
"eval_precision":
precision,
"eval_recall":
recall,
"eval_f":
f,
"conf_mat":
eval_confusion_matrix(label_ids,
predictions,
num_classes=20)
}
def regression_metric_fn(per_example_loss, label_ids, logits,
is_real_example):
loss = tf.metrics.mean(values=per_example_loss,
weights=is_real_example)
pearsonr = tf.contrib.metrics.streaming_pearson_correlation(
logits, label_ids, weights=is_real_example)
return {'eval_loss': loss, 'eval_pearsonr': pearsonr}
is_real_example = tf.cast(features["is_real_example"],
dtype=tf.float32)
#### Constucting evaluation TPUEstimatorSpec with new cache.
label_ids = tf.reshape(features['label_ids'], [-1])
if FLAGS.is_regression:
metric_fn = regression_metric_fn
else:
metric_fn = metric_fn
metric_args = [
per_example_loss, label_ids, logits, is_real_example
]
if FLAGS.use_tpu:
eval_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
eval_metrics=(metric_fn, metric_args),
scaffold_fn=scaffold_fn)
else:
eval_spec = tf.estimator.EstimatorSpec(
mode=mode,
loss=total_loss,
eval_metric_ops=metric_fn(*metric_args))
return eval_spec
elif mode == tf.estimator.ModeKeys.PREDICT:
label_ids = tf.reshape(features["label_ids"], [-1])
predictions = {
"logits": logits,
"labels": label_ids,
# "is_real": features["is_real_example"]
}
if FLAGS.use_tpu:
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
predictions={"probabilities": probabilities},
scaffold_fn=scaffold_fn)
else:
output_spec = tf.estimator.EstimatorSpec(
mode=mode, predictions={"probabilities": probabilities})
return output_spec
#### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(
FLAGS, total_loss)
monitor_dict = {}
monitor_dict["lr"] = learning_rate
#### Constucting training TPUEstimatorSpec with new cache.
if FLAGS.use_tpu:
#### Creating host calls
if not FLAGS.is_regression:
label_ids = tf.reshape(features['label_ids'], [-1])
predictions = tf.argmax(logits,
axis=-1,
output_type=label_ids.dtype)
is_correct = tf.equal(predictions, label_ids)
accuracy = tf.reduce_mean(tf.cast(is_correct, tf.float32))
monitor_dict["accuracy"] = accuracy
host_call = function_builder.construct_scalar_host_call(
monitor_dict=monitor_dict,
model_dir=FLAGS.model_dir,
prefix="train/",
reduce_fn=tf.reduce_mean)
else:
host_call = None
train_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
train_op=train_op,
host_call=host_call,
scaffold_fn=scaffold_fn)
else:
train_spec = tf.estimator.EstimatorSpec(mode=mode,
loss=total_loss,
train_op=train_op)
return train_spec
def model_fn(features, labels, mode, params):
#### Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
#### Get loss from inputs
inp_ids = tf.transpose(features["input_ids"], [1, 0])
inp_mask = tf.transpose(features["input_mask"], [1, 0])
output_ids = features["output_ids"]
output_mask = tf.transpose(features["output_mask"], [1, 0])
# define decoder inputs
decoder_inputs = tf.concat(
(tf.ones_like(output_ids[:, :1]) * 2, output_ids[:, :-1]),
-1) # 2代表<S>，是decoder的初始输入
decoder_inputs = tf.transpose(decoder_inputs, [1, 0])
args = dict(FLAGS=FLAGS,
is_training=is_training,
inp_ids=inp_ids,
inp_mask=inp_mask,
source_ntoken=params.get("source_ntoken"),
target_ntoken=params.get("target_ntoken"),
output_mask=output_mask,
output_ids=output_ids,
decoder_inputs=decoder_inputs)
s2sm = seq2seq_models.seq2seqmodel(**args)
total_loss, per_example_loss, logits = s2sm.total_loss, s2sm.per_example_loss, s2sm.logits
#### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info('#params: {}'.format(num_params))
#### load pretrained models
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
#### Evaluation mode
if mode == tf.estimator.ModeKeys.EVAL:
assert FLAGS.num_hosts == 1
def metric_fn(per_example_loss, logits, output_ids):
predictions = tf.argmax(logits, axis=-1, output_type=tf.int32)
istarget = tf.to_float(tf.not_equal(output_ids, 0))
accuracy = tf.reduce_sum(
tf.to_float(tf.equal(predictions, output_ids)) * istarget /
(tf.reduce_sum(istarget)))
loss = tf.metrics.mean(values=per_example_loss)
return {
'eval_accuracy': accuracy,
'eval_loss': loss,
}
#### Constucting evaluation TPUEstimatorSpec with new cache.
metric_args = [per_example_loss, logits, output_ids]
eval_spec = tf.estimator.EstimatorSpec(
mode=mode,
loss=total_loss,
export_outputs=metric_fn(*metric_args))
return eval_spec
elif mode == tf.estimator.ModeKeys.PREDICT:
pred = tf.argmax(logits, axis=-1, output_type=tf.int32)
predictions = {
"logits": logits,
"pred": pred,
"output_ids": output_ids,
}
output_spec = tf.estimator.EstimatorSpec(mode=mode,
predictions=predictions)
return output_spec
#### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(
FLAGS, total_loss)
monitor_dict = {}
monitor_dict["lr"] = learning_rate
#### Constucting training TPUEstimatorSpec with new cache.
train_spec = tf.estimator.EstimatorSpec(mode=mode,
loss=total_loss,
train_op=train_op)
return train_spec
def model_fn(features, labels, mode, params):
for name in sorted(features.keys()):
logging.info(" name = %s, shape = %s" % (name, features[name].shape))
input_ids = features["input_ids"]
mask = features["input_mask"]
segment_ids = features["segment_ids"]
label_ids = features["label_ids"]
#### Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
#### Get loss from inputs
total_loss, logits, predicts = function_builder.get_ner_loss(FLAGS, features, is_training, num_labels)
#### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info('#params: {}'.format(num_params))
#### load pretrained models
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
if mode == tf.estimator.ModeKeys.EVAL:
def metric_fn(label_ids, logits, num_labels, mask):
predictions = tf.math.argmax(logits, axis=-1, output_type=tf.int32)
cm = metrics.streaming_confusion_matrix(label_ids, predictions, num_labels - 1, weights=mask)
return {
"confusion_matrix": cm
}
#
eval_metrics = (metric_fn, [label_ids, logits, num_labels, mask])
eval_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
eval_metrics=eval_metrics,
scaffold_fn=scaffold_fn)
return eval_spec
elif mode == tf.estimator.ModeKeys.PREDICT:
#label_ids = tf.reshape(features["label_ids"], [-1])
# predictions = {
# "predicts": predicts,
# }
#print('predicts')
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode, predictions=predicts, scaffold_fn=scaffold_fn)
return output_spec
#### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(FLAGS, total_loss)
monitor_dict = {}
monitor_dict["lr"] = learning_rate
#### Constucting training TPUEstimatorSpec with new cache.
#train_spec = tf.estimator.EstimatorSpec(
# mode=mode, loss=total_loss, train_op=train_op)
train_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode, loss=total_loss, train_op=train_op, scaffold_fn=scaffold_fn)
return train_spec
def model_fn(features, labels, mode, params):
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
total_loss, per_example_loss, logits = create_model(FLAGS, features, is_training, num_labels)
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info('#params: {}'.format(num_params))
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
#### Evaluation mode
if mode == tf.estimator.ModeKeys.EVAL:
assert FLAGS.num_hosts == 1
def metric_fn(per_example_loss, label_list, logits, input_mask):
input_mask *= -1
input_mask += 1
predictions = tf.argmax(logits, axis=-1, output_type=tf.int32)
eval_input_dict = {
'labels': label_list,
'predictions': predictions,
'weights': input_mask
}
accuracy = tf.metrics.accuracy(**eval_input_dict)
loss = tf.metrics.mean(values=per_example_loss, weights=input_mask)
return {
'eval_accuracy': accuracy,
'eval_loss': loss}
input_mask = tf.cast(features['input_mask'], dtype=tf.float32)
label_list = features['label_list']
metric_args = [per_example_loss, label_list, logits, input_mask]
if FLAGS.use_tpu:
eval_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
eval_metrics=(metric_fn, metric_args),
scaffold_fn=scaffold_fn)
else:
eval_spec = tf.estimator.EstimatorSpec(
mode=mode,
loss=total_loss,
eval_metric_ops=metric_fn(*metric_args))
return eval_spec
#### Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(FLAGS, total_loss)
monitor_dict = {}
monitor_dict["lr"] = learning_rate
#### Constucting training TPUEstimatorSpec with new cache.
if FLAGS.use_tpu:
#### Creating host calls
host_call = None
train_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode, loss=total_loss, train_op=train_op, host_call=host_call,
scaffold_fn=scaffold_fn)
else:
train_spec = tf.estimator.EstimatorSpec(
mode=mode, loss=total_loss, train_op=train_op)
return train_spec
def model_fn(features, labels, mode, params):
kwargs = dict(
is_training = True,
use_tpu = False,
use_bfloat16 = False,
dropout = 0.1,
dropatt = 0.1,
init = 'normal',
init_range = 0.1,
init_std = 0.05,
clamp_len = -1,
)
xlnet_parameters = xlnet.RunConfig(**kwargs)
xlnet_config = xlnet.XLNetConfig(
json_path = 'xlnet-base-29-03-2020/config.json'
)
training_parameters = dict(
decay_method = 'poly',
train_steps = num_train_steps,
learning_rate = initial_learning_rate,
warmup_steps = num_warmup_steps,
min_lr_ratio = 0.0,
weight_decay = 0.00,
adam_epsilon = 1e-8,
num_core_per_host = 1,
lr_layer_decay_rate = 1,
use_tpu = False,
use_bfloat16 = False,
dropout = 0.1,
dropatt = 0.1,
init = 'normal',
init_range = 0.1,
init_std = 0.05,
clip = 1.0,
clamp_len = -1,
)
training_parameters = Parameter(**training_parameters)
X = features['X']
segment_ids = features['segment']
input_masks = tf.cast(features['mask'], tf.float32)
X_b = features['X_b']
segment_ids_b = features['segment_b']
input_masks_b = tf.cast(features['mask_b'], tf.float32)
Y = features['label'][:, 0]
with tf.compat.v1.variable_scope('xlnet', reuse = False):
xlnet_model = xlnet.XLNetModel(
xlnet_config = xlnet_config,
run_config = xlnet_parameters,
input_ids = tf.transpose(X, [1, 0]),
seg_ids = tf.transpose(segment_ids, [1, 0]),
input_mask = tf.transpose(input_masks, [1, 0]),
)
summary = xlnet_model.get_pooled_out('last', True)
with tf.compat.v1.variable_scope('xlnet', reuse = True):
xlnet_model = xlnet.XLNetModel(
xlnet_config = xlnet_config,
run_config = xlnet_parameters,
input_ids = tf.transpose(X_b, [1, 0]),
seg_ids = tf.transpose(segment_ids_b, [1, 0]),
input_mask = tf.transpose(input_masks_b, [1, 0]),
)
summary_b = xlnet_model.get_pooled_out('last', True)
vectors_concat = [summary, summary_b, tf.abs(summary - summary_b)]
vectors_concat = tf.concat(vectors_concat, axis = 1)
logits = tf.layers.dense(vectors_concat, 2)
loss = tf.reduce_mean(
tf.nn.sparse_softmax_cross_entropy_with_logits(
logits = logits, labels = Y
)
)
tf.identity(loss, 'train_loss')
accuracy = tf.metrics.accuracy(
labels = Y, predictions = tf.argmax(logits, axis = 1)
)
tf.identity(accuracy[1], name = 'train_accuracy')
tvars = tf.trainable_variables()
init_checkpoint = 'xlnet-base-29-03-2020/model.ckpt-300000'
assignment_map, initialized_variable_names = get_assignment_map_from_checkpoint(
tvars, init_checkpoint
)
tf.train.init_from_checkpoint(init_checkpoint, assignment_map)
if mode == tf.estimator.ModeKeys.TRAIN:
train_op, learning_rate, _ = model_utils.get_train_op(
training_parameters, loss
)
tf.summary.scalar('learning_rate', learning_rate)
estimator_spec = tf.estimator.EstimatorSpec(
mode = mode, loss = loss, train_op = train_op
)
elif mode == tf.estimator.ModeKeys.EVAL:
estimator_spec = tf.estimator.EstimatorSpec(
mode = tf.estimator.ModeKeys.EVAL,
loss = loss,
eval_metric_ops = {'accuracy': accuracy},
)
return estimator_spec
def model_fn(features, labels, mode, params):
#### Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
# Get loss from inputs
if FLAGS.is_regression:
(total_loss, per_example_loss,
logits) = function_builder.get_regression_loss(
FLAGS, features, is_training)
else:
(total_loss, per_example_loss,
logits) = function_builder.get_classification_loss(
FLAGS, features, n_class, is_training)
# Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info('#params: {}'.format(num_params))
# load pretrained models
scaffold_fn = model_utils.init_from_checkpoint(FLAGS)
# Evaluation mode
if mode == tf.estimator.ModeKeys.EVAL:
assert FLAGS.num_hosts == 1
def metric_fn(per_example_loss, label_ids, logits,
is_real_example):
predictions = tf.argmax(logits, axis=-1, output_type=tf.int32)
eval_input_dict = {
'labels': label_ids,
'predictions': predictions,
'weights': is_real_example
}
accuracy = tf.metrics.accuracy(**eval_input_dict)
loss = tf.metrics.mean(values=per_example_loss,
weights=is_real_example)
return {'eval_accuracy': accuracy, 'eval_loss': loss}
def regression_metric_fn(per_example_loss, label_ids, logits,
is_real_example):
loss = tf.metrics.mean(values=per_example_loss,
weights=is_real_example)
pearsonr = tf.contrib.metrics.streaming_pearson_correlation(
logits, label_ids, weights=is_real_example)
return {'eval_loss': loss, 'eval_pearsonr': pearsonr}
is_real_example = tf.cast(features["is_real_example"],
dtype=tf.float32)
# Constucting evaluation TPUEstimatorSpec with new cache.
label_ids = tf.reshape(features['label_ids'], [-1])
if FLAGS.is_regression:
metric_fn = regression_metric_fn
else:
metric_fn = metric_fn
metric_args = [
per_example_loss, label_ids, logits, is_real_example
]
if FLAGS.use_tpu:
eval_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
eval_metrics=(metric_fn, metric_args),
scaffold_fn=scaffold_fn)
else:
eval_spec = tf.estimator.EstimatorSpec(
mode=mode,
loss=total_loss,
eval_metric_ops=metric_fn(*metric_args))
return eval_spec
elif mode == tf.estimator.ModeKeys.PREDICT:
label_ids = tf.reshape(features["label_ids"], [-1])
predictions = {
"logits": logits,
"labels": label_ids,
"is_real": features["is_real_example"]
}
if FLAGS.use_tpu:
output_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
predictions=predictions,
scaffold_fn=scaffold_fn)
else:
output_spec = tf.estimator.EstimatorSpec(
mode=mode, predictions=predictions)
return output_spec
# Configuring the optimizer
train_op, learning_rate, _ = model_utils.get_train_op(
FLAGS, total_loss)
monitor_dict = {}
monitor_dict["lr"] = learning_rate
# Constucting training TPUEstimatorSpec with new cache.
if FLAGS.use_tpu:
# Creating host calls
if not FLAGS.is_regression:
label_ids = tf.reshape(features['label_ids'], [-1])
predictions = tf.argmax(logits,
axis=-1,
output_type=label_ids.dtype)
is_correct = tf.equal(predictions, label_ids)
accuracy = tf.reduce_mean(tf.cast(is_correct, tf.float32))
monitor_dict["accuracy"] = accuracy
host_call = function_builder.construct_scalar_host_call(
monitor_dict=monitor_dict,
model_dir=FLAGS.model_dir,
prefix="train/",
reduce_fn=tf.reduce_mean)
else:
host_call = None
train_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
train_op=train_op,
host_call=host_call,
scaffold_fn=scaffold_fn)
else:
train_spec = tf.estimator.EstimatorSpec(mode=mode,
loss=total_loss,
train_op=train_op)
return train_spec
def model_fn(features, labels, mode, params):
"""doc."""
#### Training or Evaluation
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
#assert is_training
assert tf.gfile.Exists(logdir)
#### Retrieve `mems` from `params["cache"]`
mems = {}
idx = 0
if FLAGS.mem_len > 0:
mems["mems"] = params["cache"]
#### Get loss from inputs
if is_training:
total_loss, new_mems, monitor_dict = function_builder.get_loss(
FLAGS, features, labels, mems, is_training)
else:
total_loss, batch_loss, batch_tgt_mask, new_mems = function_builder.get_loss(
FLAGS, features, labels, mems, is_training)
#### Turn `new_mems` into `new_cache`
new_cache = []
if FLAGS.mem_len > 0:
new_cache += new_mems["mems"]
#### Check model parameters
num_params = sum([np.prod(v.shape) for v in tf.trainable_variables()])
tf.logging.info("#params: {}".format(num_params))
#### Customized initial checkpoint
scaffold_fn = model_utils.init_from_checkpoint(FLAGS, global_vars=True)
if is_training:
#### Configuring the optimizer
train_op, learning_rate, gnorm = model_utils.get_train_op(
FLAGS, total_loss, None)
monitor_dict["gnorm"] = gnorm
monitor_dict["lr"] = learning_rate
monitor_dict['pplx'] = tf.math.exp(total_loss)
'''
#### Creating host calls
host_call = function_builder.construct_scalar_host_call(
monitor_dict=monitor_dict,
log_dir=logdir,
prefix="train/",
reduce_fn=tf.reduce_mean)
'''
#### Constucting training TPUEstimatorSpec with new cache.
train_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
train_op=train_op, #host_call=host_call,
scaffold_fn=scaffold_fn)
train_spec.cache = new_cache
return train_spec
else:
#### Constucting validation TPUEstimatorSpec with new cache.
eval_metrics = function_builder.construct_scalar_metric_fn(
batch_loss, batch_tgt_mask)
eval_spec = tf.contrib.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
eval_metrics=eval_metrics,
scaffold_fn=scaffold_fn)
eval_spec.cache = new_cache
return eval_spec