def test_ODFRecon_inputs():
input_map = dict(
DWI=dict(
argstr='%s',
mandatory=True,
position=1,
),
args=dict(argstr='%s', ),
dsi=dict(argstr='-dsi', ),
environ=dict(
nohash=True,
usedefault=True,
),
filter=dict(argstr='-f', ),
ignore_exception=dict(
nohash=True,
usedefault=True,
),
image_orientation_vectors=dict(argstr='-iop %f', ),
matrix=dict(
argstr='-mat %s',
mandatory=True,
),
n_b0=dict(
argstr='-b0 %s',
mandatory=True,
),
n_directions=dict(
argstr='%s',
mandatory=True,
position=2,
),
n_output_directions=dict(
argstr='%s',
mandatory=True,
position=3,
),
oblique_correction=dict(argstr='-oc', ),
out_prefix=dict(
argstr='%s',
position=4,
usedefault=True,
),
output_entropy=dict(argstr='-oe', ),
output_type=dict(
argstr='-ot %s',
usedefault=True,
),
sharpness=dict(argstr='-s %f', ),
subtract_background=dict(argstr='-bg', ),
terminal_output=dict(
mandatory=True,
nohash=True,
),
)
inputs = ODFRecon.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_ODFRecon_inputs():
input_map = dict(DWI=dict(argstr='%s',
mandatory=True,
position=1,
),
args=dict(argstr='%s',
),
dsi=dict(argstr='-dsi',
),
environ=dict(nohash=True,
usedefault=True,
),
filter=dict(argstr='-f',
),
ignore_exception=dict(nohash=True,
usedefault=True,
),
image_orientation_vectors=dict(argstr='-iop %f',
),
matrix=dict(argstr='-mat %s',
mandatory=True,
),
n_b0=dict(argstr='-b0 %s',
mandatory=True,
),
n_directions=dict(argstr='%s',
mandatory=True,
position=2,
),
n_output_directions=dict(argstr='%s',
mandatory=True,
position=3,
),
oblique_correction=dict(argstr='-oc',
),
out_prefix=dict(argstr='%s',
position=4,
usedefault=True,
),
output_entropy=dict(argstr='-oe',
),
output_type=dict(argstr='-ot %s',
usedefault=True,
),
sharpness=dict(argstr='-s %f',
),
subtract_background=dict(argstr='-bg',
),
terminal_output=dict(mandatory=True,
nohash=True,
),
)
inputs = ODFRecon.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_ODFRecon_outputs():
output_map = dict(B0=dict(),
DWI=dict(),
ODF=dict(),
entropy=dict(),
max=dict(),
)
outputs = ODFRecon.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_ODFRecon_outputs():
output_map = dict(
B0=dict(),
DWI=dict(),
ODF=dict(),
entropy=dict(),
max=dict(),
)
outputs = ODFRecon.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value