def test_TractSkeleton_outputs():
output_map = dict(projected_data=dict(),
skeleton_file=dict(),
)
outputs = TractSkeleton.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_TractSkeleton_outputs():
output_map = dict(projected_data=dict(),
skeleton_file=dict(),
)
outputs = TractSkeleton.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_TractSkeleton_inputs():
input_map = dict(ignore_exception=dict(nohash=True,
usedefault=True,
),
use_cingulum_mask=dict(xor=['search_mask_file'],
usedefault=True,
),
skeleton_file=dict(argstr='-o %s',
),
data_file=dict(),
args=dict(argstr='%s',
),
projected_data=dict(),
alt_skeleton=dict(argstr='-s %s',
),
alt_data_file=dict(argstr='-a %s',
),
threshold=dict(),
terminal_output=dict(mandatory=True,
nohash=True,
),
environ=dict(nohash=True,
usedefault=True,
),
in_file=dict(mandatory=True,
argstr='-i %s',
),
project_data=dict(requires=['threshold', 'distance_map', 'data_file'],
argstr='-p %.3f %s %s %s %s',
),
search_mask_file=dict(xor=['use_cingulum_mask'],
),
output_type=dict(),
distance_map=dict(),
)
inputs = TractSkeleton.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_TractSkeleton_inputs():
input_map = dict(alt_data_file=dict(argstr='-a %s',
),
alt_skeleton=dict(argstr='-s %s',
),
args=dict(argstr='%s',
),
data_file=dict(),
distance_map=dict(),
environ=dict(nohash=True,
usedefault=True,
),
ignore_exception=dict(nohash=True,
usedefault=True,
),
in_file=dict(argstr='-i %s',
mandatory=True,
),
output_type=dict(),
project_data=dict(argstr='-p %.3f %s %s %s %s',
requires=['threshold', 'distance_map', 'data_file'],
),
projected_data=dict(),
search_mask_file=dict(xor=['use_cingulum_mask'],
),
skeleton_file=dict(argstr='-o %s',
),
terminal_output=dict(mandatory=True,
nohash=True,
),
threshold=dict(),
use_cingulum_mask=dict(usedefault=True,
xor=['search_mask_file'],
),
)
inputs = TractSkeleton.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
