def test_coreg():
moving = example_data(infile='functional.nii')
target = example_data(infile='T1.nii')
mat = example_data(infile='trans.mat')
coreg = spmu.CalcCoregAffine(matlab_cmd='mymatlab')
coreg.inputs.target = target
assert_equal(coreg.inputs.matlab_cmd, 'mymatlab')
coreg.inputs.moving = moving
assert_equal(isdefined(coreg.inputs.mat), False)
pth, mov, _ = split_filename(moving)
_, tgt, _ = split_filename(target)
mat = os.path.join(pth, '%s_to_%s.mat' % (mov, tgt))
invmat = fname_presuffix(mat, prefix='inverse_')
scrpt = coreg._make_matlab_command(None)
assert_equal(coreg.inputs.mat, mat)
assert_equal(coreg.inputs.invmat, invmat)
def test_coreg():
moving = example_data(infile="functional.nii")
target = example_data(infile="T1.nii")
mat = example_data(infile="trans.mat")
coreg = spmu.CalcCoregAffine(matlab_cmd="mymatlab")
coreg.inputs.target = target
assert coreg.inputs.matlab_cmd == "mymatlab"
coreg.inputs.moving = moving
assert not isdefined(coreg.inputs.mat)
pth, mov, _ = split_filename(moving)
_, tgt, _ = split_filename(target)
mat = os.path.join(pth, "%s_to_%s.mat" % (mov, tgt))
invmat = fname_presuffix(mat, prefix="inverse_")
scrpt = coreg._make_matlab_command(None)
assert coreg.inputs.mat == mat
assert coreg.inputs.invmat == invmat
