def configuration(parent_package='', top_path=None):
from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
from numpy.distutils.misc_util import get_info as get_misc_info
from numpy.distutils.system_info import get_info as get_sys_info
from distutils.sysconfig import get_python_inc
config = Configuration('spatial', parent_package, top_path)
config.add_data_dir('tests')
# qhull
qhull_src = list(glob.glob(join(dirname(__file__), 'qhull', 'src', '*.c')))
inc_dirs = [get_python_inc()]
if inc_dirs[0] != get_python_inc(plat_specific=1):
inc_dirs.append(get_python_inc(plat_specific=1))
inc_dirs.append(get_numpy_include_dirs())
inc_dirs.append(join(dirname(dirname(__file__)), '_lib'))
cfg = dict(get_sys_info('lapack_opt'))
cfg.setdefault('include_dirs', []).extend(inc_dirs)
config.add_extension('qhull', sources=['qhull.c'] + qhull_src, **cfg)
# cKDTree
ckdtree_src = [
'query.cxx', 'build.cxx', 'globals.cxx', 'cpp_exc.cxx',
'query_pairs.cxx', 'count_neighbors.cxx', 'query_ball_point.cxx',
'query_ball_tree.cxx', 'sparse_distances.cxx'
]
ckdtree_src = [join('ckdtree', 'src', x) for x in ckdtree_src]
ckdtree_headers = [
'ckdtree_decl.h', 'ckdtree_methods.h', 'coo_entries.h', 'cpp_exc.h',
'cpp_utils.h', 'distance_base.h', 'distance.h', 'ordered_pair.h',
'partial_sort.h', 'rectangle.h'
]
ckdtree_headers = [join('ckdtree', 'src', x) for x in ckdtree_headers]
ckdtree_dep = ['ckdtree.cxx'] + ckdtree_headers + ckdtree_src
config.add_extension('ckdtree',
sources=['ckdtree.cxx'] + ckdtree_src,
depends=ckdtree_dep,
include_dirs=inc_dirs + [join('ckdtree', 'src')])
# _distance_wrap
config.add_extension('_distance_wrap',
sources=[join('src', 'distance_wrap.c')],
depends=[join('src', 'distance_impl.h')],
include_dirs=[get_numpy_include_dirs()],
extra_info=get_misc_info("npymath"))
config.add_extension('_voronoi', sources=['_voronoi.c'])
config.add_extension('_hausdorff', sources=['_hausdorff.c'])
# Add license files
config.add_data_files('qhull/COPYING.txt')
return config
def configuration(parent_package='', top_path=None):
from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
from numpy.distutils.misc_util import get_info as get_misc_info
from numpy.distutils.system_info import get_info as get_sys_info
from distutils.sysconfig import get_python_inc
config = Configuration('spatial', parent_package, top_path)
config.add_data_dir('tests')
# qhull
qhull_src = [
'geom2.c', 'geom.c', 'global.c', 'io.c', 'libqhull.c', 'mem.c',
'merge.c', 'poly2.c', 'poly.c', 'qset.c', 'random.c', 'rboxlib.c',
'stat.c', 'user.c', 'usermem.c', 'userprintf.c', 'userprintf_rbox.c'
]
qhull_src = [join('qhull', 'src', x) for x in qhull_src]
inc_dirs = [get_python_inc()]
if inc_dirs[0] != get_python_inc(plat_specific=1):
inc_dirs.append(get_python_inc(plat_specific=1))
inc_dirs.append(get_numpy_include_dirs())
cfg = dict(get_sys_info('lapack_opt'))
cfg.setdefault('include_dirs', []).extend(inc_dirs)
cfg.setdefault('define_macros', []).append(('qh_QHpointer', '1'))
config.add_extension('qhull', sources=['qhull.c'] + qhull_src, **cfg)
# cKDTree
ckdtree_src = [
'query.cxx', 'build.cxx', 'globals.cxx', 'cpp_exc.cxx',
'query_pairs.cxx', 'count_neighbors.cxx', 'query_ball_point.cxx',
'query_ball_tree.cxx', 'sparse_distances.cxx'
]
ckdtree_src = [join('ckdtree', 'src', x) for x in ckdtree_src]
ckdtree_headers = [
'ckdtree_decl.h', 'cpp_exc.h', 'ckdtree_methods.h', 'cpp_utils.h',
'rectangle.h', 'distance.h', 'distance_box.h', 'ordered_pair.h'
]
ckdtree_headers = [join('ckdtree', 'src', x) for x in ckdtree_headers]
ckdtree_dep = ['ckdtree.cxx'] + ckdtree_headers + ckdtree_src
config.add_extension('ckdtree',
sources=['ckdtree.cxx'] + ckdtree_src,
depends=ckdtree_dep,
include_dirs=inc_dirs + [join('ckdtree', 'src')])
# _distance_wrap
config.add_extension('_distance_wrap',
sources=[join('src', 'distance_wrap.c')],
depends=[join('src', 'distance_impl.h')],
include_dirs=[get_numpy_include_dirs()],
extra_info=get_misc_info("npymath"))
return config
def configuration(parent_package='', top_path=None):
from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
from numpy.distutils.misc_util import get_info as get_misc_info
from numpy.distutils.system_info import get_info as get_sys_info
from distutils.sysconfig import get_python_inc
config = Configuration('spatial', parent_package, top_path)
config.add_data_dir('tests')
# qhull
qhull_src = ['geom2.c', 'geom.c', 'global.c', 'io.c', 'libqhull.c',
'mem.c', 'merge.c', 'poly2.c', 'poly.c', 'qset.c',
'random.c', 'rboxlib.c', 'stat.c', 'user.c', 'usermem.c',
'userprintf.c', 'userprintf_rbox.c']
qhull_src = [join('qhull', 'src', x) for x in qhull_src]
inc_dirs = [get_python_inc()]
if inc_dirs[0] != get_python_inc(plat_specific=1):
inc_dirs.append(get_python_inc(plat_specific=1))
inc_dirs.append(get_numpy_include_dirs())
cfg = dict(get_sys_info('lapack_opt'))
cfg.setdefault('include_dirs', []).extend(inc_dirs)
cfg.setdefault('define_macros', []).append(('qh_QHpointer','1'))
config.add_extension('qhull',
sources=['qhull.c'] + qhull_src,
**cfg)
# cKDTree
ckdtree_src = ['ckdtree_query.cxx',
'ckdtree_globals.cxx',
'ckdtree_cpp_exc.cxx']
ckdtree_src = [join('ckdtree', 'src', x) for x in ckdtree_src]
ckdtree_headers = ['ckdtree_decl.h',
'ckdtree_exc.h',
'ckdtree_methods.h',
'ckdtree_utils.h']
ckdtree_headers = [join('ckdtree', 'src', x) for x in ckdtree_headers]
ckdtree_dep = ['ckdtree.cxx'] + ckdtree_headers + ckdtree_src
config.add_extension('ckdtree',
sources=[join('ckdtree', 'ckdtree.cxx')] + ckdtree_src,
depends=ckdtree_dep,
include_dirs=inc_dirs + [join('ckdtree','src')])
# _distance_wrap
config.add_extension('_distance_wrap',
sources=[join('src', 'distance_wrap.c')],
depends=[join('src', 'distance_impl.h')],
include_dirs=[get_numpy_include_dirs()],
extra_info=get_misc_info("npymath"))
return config
def configuration(parent_package='', top_path=None):
from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
from numpy.distutils.misc_util import get_info as get_misc_info
from _build_utils.system_info import get_info as get_sys_info
from distutils.sysconfig import get_python_inc
config = Configuration('spatial', parent_package, top_path)
config.add_data_dir('tests')
# spatial.transform
config.add_subpackage('transform')
# qhull
qhull_src = sorted(
glob.glob(join(dirname(__file__), 'qhull_src', 'src', '*.c')))
inc_dirs = [get_python_inc()]
if inc_dirs[0] != get_python_inc(plat_specific=1):
inc_dirs.append(get_python_inc(plat_specific=1))
inc_dirs.append(get_numpy_include_dirs())
inc_dirs.append(join(dirname(dirname(__file__)), '_lib'))
cfg = dict(get_sys_info('lapack_opt'))
cfg.setdefault('include_dirs', []).extend(inc_dirs)
config.add_extension('qhull',
sources=['qhull.c', 'qhull_misc.c'] + qhull_src,
**cfg)
# _distance_wrap
config.add_extension('_distance_wrap',
sources=[join('src', 'distance_wrap.c')],
depends=[join('src', 'distance_impl.h')],
include_dirs=[get_numpy_include_dirs()],
extra_info=get_misc_info("npymath"))
config.add_extension('_voronoi', sources=['_voronoi.c'])
config.add_extension('_hausdorff', sources=['_hausdorff.c'])
# Add license files
config.add_data_files('qhull_src/COPYING.txt')
return config
def configuration(parent_package='', top_path=None):
from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
from numpy.distutils.misc_util import get_info as get_misc_info
from numpy.distutils.system_info import get_info as get_sys_info
config = Configuration('distance', parent_package, top_path)
config.add_data_dir('tests')
# _distance_wrap
config.add_extension('_distance_wrap',
sources=[join('src', 'distance_wrap.c')],
depends=[join('src', 'distance_impl.h')],
include_dirs=[get_numpy_include_dirs()],
extra_info=get_misc_info("npymath"))
config.add_extension('_hausdorff', sources=['_hausdorff.c'])
return config
def configuration(parent_package='', top_path=None):
from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
from numpy.distutils.misc_util import get_info as get_misc_info
from scipy._build_utils.system_info import get_info
from scipy._build_utils import combine_dict, uses_blas64, numpy_nodepr_api
from scipy._build_utils.compiler_helper import set_cxx_flags_hook
from distutils.sysconfig import get_python_inc
import pybind11
config = Configuration('spatial', parent_package, top_path)
# spatial.transform
config.add_subpackage('transform')
# qhull
qhull_src = sorted(
glob.glob(join(dirname(__file__), 'qhull_src', 'src', '*.c')))
inc_dirs = [get_python_inc()]
if inc_dirs[0] != get_python_inc(plat_specific=1):
inc_dirs.append(get_python_inc(plat_specific=1))
inc_dirs.append(get_numpy_include_dirs())
inc_dirs.append(join(dirname(dirname(__file__)), '_lib'))
inc_dirs.append(join(dirname(dirname(__file__)), '_build_utils', 'src'))
if uses_blas64():
lapack_opt = get_info('lapack_ilp64_opt')
else:
lapack_opt = get_info('lapack_opt')
cfg = combine_dict(lapack_opt, include_dirs=inc_dirs)
config.add_extension('qhull',
sources=['qhull.c', 'qhull_misc.c'] + qhull_src,
**cfg)
# cKDTree
ckdtree_src = [
'query.cxx', 'build.cxx', 'query_pairs.cxx', 'count_neighbors.cxx',
'query_ball_point.cxx', 'query_ball_tree.cxx', 'sparse_distances.cxx'
]
ckdtree_src = [join('ckdtree', 'src', x) for x in ckdtree_src]
ckdtree_headers = [
'ckdtree_decl.h', 'coo_entries.h', 'distance_base.h', 'distance.h',
'ordered_pair.h', 'partial_sort.h', 'rectangle.h'
]
ckdtree_headers = [join('ckdtree', 'src', x) for x in ckdtree_headers]
ckdtree_dep = ['ckdtree.cxx'] + ckdtree_headers + ckdtree_src
ext = config.add_extension('ckdtree',
sources=['ckdtree.cxx'] + ckdtree_src,
depends=ckdtree_dep,
include_dirs=inc_dirs +
[join('ckdtree', 'src')])
ext._pre_build_hook = set_cxx_flags_hook
# _distance_wrap
config.add_extension('_distance_wrap',
sources=[join('src', 'distance_wrap.c')],
depends=[join('src', 'distance_impl.h')],
include_dirs=[
get_numpy_include_dirs(),
join(dirname(dirname(__file__)), '_lib')
],
extra_info=get_misc_info("npymath"))
distance_pybind_includes = [
pybind11.get_include(True),
pybind11.get_include(False),
get_numpy_include_dirs()
]
ext = config.add_extension('_distance_pybind',
sources=[join('src', 'distance_pybind.cpp')],
depends=[
join('src', 'function_ref.h'),
join('src', 'views.h'),
join('src', 'distance_metrics.h')
],
include_dirs=distance_pybind_includes,
language='c++',
**numpy_nodepr_api)
ext._pre_build_hook = pre_build_hook
config.add_extension('_voronoi', sources=['_voronoi.c'])
config.add_extension('_hausdorff', sources=['_hausdorff.c'])
# Add license files
config.add_data_files('qhull_src/COPYING.txt')
# Type stubs
config.add_data_files('*.pyi')
return config
def in_src(name):
return osp.join('src', name)
# =========================================================================
config = Configuration(package_name='numpy_linalg')
inc_dirs = [get_python_inc()]
if inc_dirs[0] != get_python_inc(plat_specific=1):
inc_dirs.append(get_python_inc(plat_specific=1))
inc_dirs.append(get_numpy_include_dirs())
inc_dirs.append('src')
lapack_info = get_sys_info('lapack_opt', 0) # and {}
npymath_info = get_misc_info("npymath")
all_info = {k: lapack_info[k] + npymath_info[k] for k in lapack_info.keys()}
rearrange = in_src('rearrange_data.c.src')
module_loc = 'gufuncs.'
# =============================================================================
config.add_extension(module_loc + '_gufuncs_cloop',
sources=[in_src('gufuncs_cloop.c.src')],
include_dirs=inc_dirs,
extra_info=npymath_info)
# =============================================================================
config.add_extension(module_loc + '_gufuncs_blas',
sources=[in_src('gufuncs_blas.c.src'), rearrange],
include_dirs=inc_dirs,
extra_info=all_info)
# =============================================================================
def configuration(parent_package='', top_path=None):
from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
from numpy.distutils.misc_util import get_info as get_misc_info
from numpy.distutils.system_info import get_info as get_sys_info
from distutils.sysconfig import get_python_inc
config = Configuration('spatial', parent_package, top_path)
config.add_data_dir('tests')
# qhull
qhull_src = list(glob.glob(join(dirname(__file__), 'qhull', 'src', '*.c')))
inc_dirs = [get_python_inc()]
if inc_dirs[0] != get_python_inc(plat_specific=1):
inc_dirs.append(get_python_inc(plat_specific=1))
inc_dirs.append(get_numpy_include_dirs())
cfg = dict(get_sys_info('lapack_opt'))
cfg.setdefault('include_dirs', []).extend(inc_dirs)
def get_qhull_misc_config(ext, build_dir):
# Generate a header file containing defines
config_cmd = config.get_config_cmd()
defines = []
if config_cmd.check_func('open_memstream', decl=True, call=True):
defines.append(('HAVE_OPEN_MEMSTREAM', '1'))
target = join(dirname(__file__), 'qhull_misc_config.h')
with open(target, 'w') as f:
for name, value in defines:
f.write('#define {0} {1}\n'.format(name, value))
config.add_extension('qhull',
sources=['qhull.c'] + qhull_src +
[get_qhull_misc_config],
**cfg)
# cKDTree
ckdtree_src = [
'query.cxx', 'build.cxx', 'globals.cxx', 'cpp_exc.cxx',
'query_pairs.cxx', 'count_neighbors.cxx', 'query_ball_point.cxx',
'query_ball_tree.cxx', 'sparse_distances.cxx'
]
ckdtree_src = [join('ckdtree', 'src', x) for x in ckdtree_src]
ckdtree_headers = [
'ckdtree_decl.h', 'cpp_exc.h', 'ckdtree_methods.h', 'cpp_utils.h',
'rectangle.h', 'distance.h', 'distance_box.h', 'ordered_pair.h'
]
ckdtree_headers = [join('ckdtree', 'src', x) for x in ckdtree_headers]
ckdtree_dep = ['ckdtree.cxx'] + ckdtree_headers + ckdtree_src
config.add_extension('ckdtree',
sources=['ckdtree.cxx'] + ckdtree_src,
depends=ckdtree_dep,
include_dirs=inc_dirs + [join('ckdtree', 'src')])
# _distance_wrap
config.add_extension('_distance_wrap',
sources=[join('src', 'distance_wrap.c')],
depends=[join('src', 'distance_impl.h')],
include_dirs=[get_numpy_include_dirs()],
extra_info=get_misc_info("npymath"))
return config
def configuration(parent_package='', top_path=None):
from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
from numpy.distutils.misc_util import get_info as get_misc_info
from scipy._build_utils.system_info import get_info as get_sys_info
from distutils.sysconfig import get_python_inc
config = Configuration('spatial', parent_package, top_path)
config.add_data_dir('tests')
# spatial.transform
config.add_subpackage('transform')
# qhull
qhull_src = list(glob.glob(join(dirname(__file__), 'qhull_src',
'src', '*.c')))
inc_dirs = [get_python_inc()]
if inc_dirs[0] != get_python_inc(plat_specific=1):
inc_dirs.append(get_python_inc(plat_specific=1))
inc_dirs.append(get_numpy_include_dirs())
inc_dirs.append(join(dirname(dirname(__file__)), '_lib'))
cfg = dict(get_sys_info('lapack_opt'))
cfg.setdefault('include_dirs', []).extend(inc_dirs)
config.add_extension('qhull',
sources=['qhull.c'] + qhull_src,
**cfg)
# cKDTree
ckdtree_src = ['query.cxx',
'build.cxx',
'globals.cxx',
'cpp_exc.cxx',
'query_pairs.cxx',
'count_neighbors.cxx',
'query_ball_point.cxx',
'query_ball_tree.cxx',
'sparse_distances.cxx']
ckdtree_src = [join('ckdtree', 'src', x) for x in ckdtree_src]
ckdtree_headers = ['ckdtree_decl.h',
'ckdtree_methods.h',
'coo_entries.h',
'cpp_exc.h',
'cpp_utils.h',
'distance_base.h',
'distance.h',
'ordered_pair.h',
'partial_sort.h',
'rectangle.h']
ckdtree_headers = [join('ckdtree', 'src', x) for x in ckdtree_headers]
ckdtree_dep = ['ckdtree.cxx'] + ckdtree_headers + ckdtree_src
config.add_extension('ckdtree',
sources=['ckdtree.cxx'] + ckdtree_src,
depends=ckdtree_dep,
include_dirs=inc_dirs + [join('ckdtree', 'src')])
# _distance_wrap
config.add_extension('_distance_wrap',
sources=[join('src', 'distance_wrap.c')],
depends=[join('src', 'distance_impl.h')],
include_dirs=[get_numpy_include_dirs()],
extra_info=get_misc_info("npymath"))
config.add_extension('_voronoi',
sources=['_voronoi.c'])
config.add_extension('_hausdorff',
sources=['_hausdorff.c'])
# Add license files
config.add_data_files('qhull_src/COPYING.txt')
return config
def configuration(parent_package='', top_path=None):
from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
from numpy.distutils.misc_util import get_info as get_misc_info
from numpy.distutils.system_info import get_info as get_sys_info
from distutils.sysconfig import get_python_inc
config = Configuration('spatial', parent_package, top_path)
config.add_data_dir('tests')
# qhull
qhull_src = list(glob.glob(join(dirname(__file__), 'qhull',
'src', '*.c')))
inc_dirs = [get_python_inc()]
if inc_dirs[0] != get_python_inc(plat_specific=1):
inc_dirs.append(get_python_inc(plat_specific=1))
inc_dirs.append(get_numpy_include_dirs())
cfg = dict(get_sys_info('lapack_opt'))
cfg.setdefault('include_dirs', []).extend(inc_dirs)
def get_qhull_misc_config(ext, build_dir):
# Generate a header file containing defines
config_cmd = config.get_config_cmd()
defines = []
if config_cmd.check_func('open_memstream', decl=True, call=True):
defines.append(('HAVE_OPEN_MEMSTREAM', '1'))
target = join(dirname(__file__), 'qhull_misc_config.h')
with open(target, 'w') as f:
for name, value in defines:
f.write('#define {0} {1}\n'.format(name, value))
config.add_extension('qhull',
sources=['qhull.c'] + qhull_src + [get_qhull_misc_config],
**cfg)
# cKDTree
ckdtree_src = ['query.cxx',
'build.cxx',
'globals.cxx',
'cpp_exc.cxx',
'query_pairs.cxx',
'count_neighbors.cxx',
'query_ball_point.cxx',
'query_ball_tree.cxx',
'sparse_distances.cxx']
ckdtree_src = [join('ckdtree', 'src', x) for x in ckdtree_src]
ckdtree_headers = ['ckdtree_decl.h',
'cpp_exc.h',
'ckdtree_methods.h',
'cpp_utils.h',
'rectangle.h',
'distance.h',
'distance_box.h',
'ordered_pair.h']
ckdtree_headers = [join('ckdtree', 'src', x) for x in ckdtree_headers]
ckdtree_dep = ['ckdtree.cxx'] + ckdtree_headers + ckdtree_src
config.add_extension('ckdtree',
sources=['ckdtree.cxx'] + ckdtree_src,
depends=ckdtree_dep,
include_dirs=inc_dirs + [join('ckdtree','src')])
# _distance_wrap
config.add_extension('_distance_wrap',
sources=[join('src', 'distance_wrap.c')],
depends=[join('src', 'distance_impl.h')],
include_dirs=[get_numpy_include_dirs()],
extra_info=get_misc_info("npymath"))
config.add_extension('_voronoi',
sources=['_voronoi.c'])
config.add_extension('_hausdorff',
sources=['_hausdorff.c'])
return config