def __init__(self, parent, orig_tab_data):
xrcfr_acq.__init__(self, parent)
self.conf = get_acqui_conf()
for n in presets:
self.cmb_presets.Append(n)
# TODO: record and reuse the preset used?
self.cmb_presets.Select(0)
self.filename = model.StringVA(create_filename(self.conf.last_path, self.conf.fn_ptn,
self.conf.last_extension, self.conf.fn_count))
self.filename.subscribe(self._onFilename, init=True)
# The name of the last file that got written to disk (used for auto viewing on close)
self.last_saved_file = None
# True when acquisition occurs
self.acquiring = False
# a ProgressiveFuture if the acquisition is going on
self.acq_future = None
self._acq_future_connector = None
self._main_data_model = orig_tab_data.main
# duplicate the interface, but with only one view
self._tab_data_model = self.duplicate_tab_data_model(orig_tab_data)
# Create a new settings controller for the acquisition dialog
self._settings_controller = SecomSettingsController(
self,
self._tab_data_model,
highlight_change=True # also adds a "Reset" context menu
)
orig_view = orig_tab_data.focussedView.value
self._view = self._tab_data_model.focussedView.value
self._hidden_view = StreamView("Plugin View Hidden")
self.streambar_controller = StreamBarController(self._tab_data_model,
self.pnl_secom_streams,
static=True,
ignore_view=True)
# The streams currently displayed are the one visible
self.add_all_streams()
# The list of streams ready for acquisition (just used as a cache)
self._acq_streams = {}
# FIXME: pass the fold_panels
# Compute the preset values for each preset
self._preset_values = {} # dict string -> dict (SettingEntries -> value)
self._orig_entries = get_global_settings_entries(self._settings_controller)
for sc in self.streambar_controller.stream_controllers:
self._orig_entries += get_local_settings_entries(sc)
self._orig_settings = preset_as_is(self._orig_entries) # to detect changes
for n, preset in presets.items():
self._preset_values[n] = preset(self._orig_entries)
# Presets which have been confirmed on the hardware
self._presets_confirmed = set() # (string)
self.start_listening_to_va()
# If it could be possible to do fine alignment, allow the user to choose
if self._can_fine_align(self._tab_data_model.streams.value):
self.chkbox_fine_align.Show()
# Set to True to make it the default, but will be automatically
# disabled later if the current visible streams don't allow it.
self.chkbox_fine_align.Value = True
for s in self._tab_data_model.streams.value:
if isinstance(s, EMStream):
em_det = s.detector
em_emt = s.emitter
elif isinstance(s, OpticalStream) and not isinstance(s, ScannedFluoStream):
opt_det = s.detector
self._ovrl_stream = stream.OverlayStream("Fine alignment", opt_det, em_emt, em_det,
opm=self._main_data_model.opm)
self._ovrl_stream.dwellTime.value = self._main_data_model.fineAlignDwellTime.value
else:
self.chkbox_fine_align.Show(False)
self.chkbox_fine_align.Value = False
self._prev_fine_align = self.chkbox_fine_align.Value
# make sure the view displays the same thing as the one we are
# duplicating
self._view.view_pos.value = orig_view.view_pos.value
self._view.mpp.value = orig_view.mpp.value
self._view.merge_ratio.value = orig_view.merge_ratio.value
# attach the view to the viewport
self.pnl_view_acq.canvas.fit_view_to_next_image = False
self.pnl_view_acq.setView(self._view, self._tab_data_model)
# The TOOL_ROA is not present because we don't allow the user to change
# the ROA), so we need to explicitly request the canvas to show the ROA.
if hasattr(self._tab_data_model, "roa") and self._tab_data_model.roa is not None:
cnvs = self.pnl_view_acq.canvas
self.roa_overlay = RepetitionSelectOverlay(cnvs, self._tab_data_model.roa,
self._tab_data_model.fovComp)
cnvs.add_world_overlay(self.roa_overlay)
self.Bind(wx.EVT_CHAR_HOOK, self.on_key)
self.btn_cancel.Bind(wx.EVT_BUTTON, self.on_close)
self.btn_change_file.Bind(wx.EVT_BUTTON, self.on_change_file)
self.btn_secom_acquire.Bind(wx.EVT_BUTTON, self.on_acquire)
self.cmb_presets.Bind(wx.EVT_COMBOBOX, self.on_preset)
self.Bind(wx.EVT_CLOSE, self.on_close)
# on_streams_changed is compatible because it doesn't use the args
self.chkbox_fine_align.Bind(wx.EVT_CHECKBOX, self.on_streams_changed)
self.on_preset(None) # will force setting the current preset
# To update the estimated time when streams are removed/added
self._view.stream_tree.flat.subscribe(self.on_streams_changed)
self._hidden_view.stream_tree.flat.subscribe(self.on_streams_changed)
def __init__(self, parent, orig_tab_data):
xrcfr_acq.__init__(self, parent)
self.conf = get_acqui_conf()
for n in presets:
self.cmb_presets.Append(n)
# TODO: record and reuse the preset used?
self.cmb_presets.Select(0)
self.filename = model.StringVA(self._get_default_filename())
self.filename.subscribe(self._onFilename, init=True)
# The name of the last file that got written to disk (used for auto viewing on close)
self.last_saved_file = None
# a ProgressiveFuture if the acquisition is going on
self.acq_future = None
self._acq_future_connector = None
self._main_data_model = orig_tab_data.main
# duplicate the interface, but with only one view
self._tab_data_model = self.duplicate_tab_data_model(orig_tab_data)
# Create a new settings controller for the acquisition dialog
self._settings_controller = SecomSettingsController(
self,
self._tab_data_model,
highlight_change=True # also adds a "Reset" context menu
)
# To turn on/off the fan
self._orig_fan_speed = None
orig_view = orig_tab_data.focussedView.value
self._view = self._tab_data_model.focussedView.value
self.streambar_controller = StreamBarController(self._tab_data_model,
self.pnl_secom_streams)
# The streams currently displayed are the one visible
self.add_all_streams()
# FIXME: pass the fold_panels
# Compute the preset values for each preset
self._preset_values = {} # dict string -> dict (SettingEntries -> value)
orig_entries = get_global_settings_entries(self._settings_controller)
for sc in self.streambar_controller.stream_controllers:
orig_entries += get_local_settings_entries(sc)
self._orig_settings = preset_as_is(orig_entries) # to detect changes
for n, preset in presets.items():
self._preset_values[n] = preset(orig_entries)
# Presets which have been confirmed on the hardware
self._presets_confirmed = set() # (string)
# If it could be possible to do fine alignment, allow the user to choose
if self._can_fine_align(self._tab_data_model.streams.value):
self.chkbox_fine_align.Show()
# Set to True to make it the default, but will be automatically
# disabled later if the current visible streams don't allow it.
self.chkbox_fine_align.Value = True
for s in self._tab_data_model.streams.value:
if isinstance(s, EMStream):
em_det = s.detector
em_emt = s.emitter
elif isinstance(s, OpticalStream):
opt_det = s.detector
self._ovrl_stream = stream.OverlayStream("Fine alignment", opt_det, em_emt, em_det)
if self._main_data_model.role == "delphi":
self._main_data_model.fineAlignDwellTime.value = 0.5
self._ovrl_stream.dwellTime.value = self._main_data_model.fineAlignDwellTime.value
else:
self.chkbox_fine_align.Show(False)
self.chkbox_fine_align.Value = False
self._prev_fine_align = self.chkbox_fine_align.Value
# make sure the view displays the same thing as the one we are
# duplicating
self._view.view_pos.value = orig_view.view_pos.value
self._view.mpp.value = orig_view.mpp.value
self._view.merge_ratio.value = orig_view.merge_ratio.value
# attach the view to the viewport
self.pnl_view_acq.canvas.fit_view_to_next_image = False
self.pnl_view_acq.setView(self._view, self._tab_data_model)
self.Bind(wx.EVT_CHAR_HOOK, self.on_key)
self.btn_cancel.Bind(wx.EVT_BUTTON, self.on_close)
self.btn_change_file.Bind(wx.EVT_BUTTON, self.on_change_file)
self.btn_secom_acquire.Bind(wx.EVT_BUTTON, self.on_acquire)
self.cmb_presets.Bind(wx.EVT_COMBOBOX, self.on_preset)
self.Bind(wx.EVT_CLOSE, self.on_close)
# on_streams_changed is compatible because it doesn't use the args
self.chkbox_fine_align.Bind(wx.EVT_CHECKBOX, self.on_streams_changed)
self.on_preset(None) # will force setting the current preset
# TODO: use the presets VAs and subscribe to each of them, instead of
# using pub/sub messages
pub.subscribe(self.on_setting_change, 'setting.changed')
# TODO: we should actually listen to the stream tree, but it's not
# currently possible. => listen to .flat once it's there
# Currently just use view.lastUpdate which should be "similar"
# (but doesn't work if the stream contains no image)
self._view.lastUpdate.subscribe(self.on_streams_changed)
def __init__(self, parent, orig_tab_data):
xrcfr_acq.__init__(self, parent)
self.conf = get_acqui_conf()
for n in presets:
self.cmb_presets.Append(n)
# TODO: record and reuse the preset used?
self.cmb_presets.Select(0)
self.filename = model.StringVA(self._get_default_filename())
self.filename.subscribe(self._onFilename, init=True)
# a ProgressiveFuture if the acquisition is going on
self.acq_future = None
self._acq_future_connector = None
# duplicate the interface, but with only one view
self._tab_data_model = self.duplicate_tab_data_model(orig_tab_data)
# Create a new settings controller for the acquisition dialog
self._settings_controller = SecomSettingsController(self,
self._tab_data_model,
highlight_change=True)
# FIXME: pass the fold_panels
# Compute the preset values for each preset
self._preset_values = {} # dict string -> dict (SettingEntries -> value)
orig_entries = self._settings_controller.entries
self._orig_settings = preset_as_is(orig_entries) # to detect changes
for n, preset in presets.items():
self._preset_values[n] = preset(orig_entries)
# Presets which have been confirmed on the hardware
self._presets_confirmed = set() # (string)
orig_view = orig_tab_data.focussedView.value
view = self._tab_data_model.focussedView.value
self.stream_controller = StreamController(self._tab_data_model,
self.pnl_secom_streams)
# The streams currently displayed are the one visible
self.add_all_streams(orig_view.getStreams())
# If it could be possible to do fine alignment, allow the user to choose
if self._can_fine_align(self._tab_data_model.streams.value):
self.chkbox_fine_align.Show()
# Set to True to make it the default, but will be automatically
# disabled later if the current visible streams don't allow it.
self.chkbox_fine_align.Value = True
main_data = self._tab_data_model.main
self._ovrl_stream = stream.OverlayStream("fine alignment", main_data.ccd,
main_data.ebeam, main_data.sed)
self._ovrl_stream.dwellTime.value = main_data.fineAlignDwellTime.value
else:
self.chkbox_fine_align.Show(False)
self.chkbox_fine_align.Value = False
self._prev_fine_align = self.chkbox_fine_align.Value
# make sure the view displays the same thing as the one we are
# duplicating
view.view_pos.value = orig_view.view_pos.value
view.mpp.value = orig_view.mpp.value
view.merge_ratio.value = orig_view.merge_ratio.value
# attach the view to the viewport
self.pnl_view_acq.setView(view, self._tab_data_model)
self.Bind(wx.EVT_CHAR_HOOK, self.on_key)
self.btn_cancel.Bind(wx.EVT_BUTTON, self.on_close)
self.btn_change_file.Bind(wx.EVT_BUTTON, self.on_change_file)
self.btn_secom_acquire.Bind(wx.EVT_BUTTON, self.on_acquire)
self.cmb_presets.Bind(wx.EVT_COMBOBOX, self.on_preset)
self.Bind(wx.EVT_CLOSE, self.on_close)
# on_streams_changed is compatible because it doesn't use the args
self.chkbox_fine_align.Bind(wx.EVT_CHECKBOX, self.on_streams_changed)
self.on_preset(None) # will force setting the current preset
pub.subscribe(self.on_setting_change, 'setting.changed')
# TODO: we should actually listen to the stream tree, but it's not
# currently possible.
# Currently just use view.last_update which should be "similar"
view.lastUpdate.subscribe(self.on_streams_changed)
def __init__(self, parent, orig_tab_data):
xrcfr_acq.__init__(self, parent)
self.conf = get_acqui_conf()
for n in presets:
self.cmb_presets.Append(n)
# TODO: record and reuse the preset used?
self.cmb_presets.Select(0)
self.filename = model.StringVA(self._get_default_filename())
self.filename.subscribe(self._onFilename, init=True)
# The name of the last file that got written to disk (used for auto viewing on close)
self.last_saved_file = None
# a ProgressiveFuture if the acquisition is going on
self.acq_future = None
self._acq_future_connector = None
self._main_data_model = orig_tab_data.main
# duplicate the interface, but with only one view
self._tab_data_model = self.duplicate_tab_data_model(orig_tab_data)
# Create a new settings controller for the acquisition dialog
self._settings_controller = SecomSettingsController(
self,
self._tab_data_model,
highlight_change=True # also adds a "Reset" context menu
)
# To turn on/off the fan
self._orig_fan_speed = None
self._orig_fan_temp = None
orig_view = orig_tab_data.focussedView.value
self._view = self._tab_data_model.focussedView.value
self.streambar_controller = StreamBarController(
self._tab_data_model, self.pnl_secom_streams)
# The streams currently displayed are the one visible
self.add_all_streams()
# FIXME: pass the fold_panels
# Compute the preset values for each preset
self._preset_values = {
} # dict string -> dict (SettingEntries -> value)
orig_entries = get_global_settings_entries(self._settings_controller)
for sc in self.streambar_controller.stream_controllers:
orig_entries += get_local_settings_entries(sc)
self._orig_settings = preset_as_is(orig_entries) # to detect changes
for n, preset in presets.items():
self._preset_values[n] = preset(orig_entries)
# Presets which have been confirmed on the hardware
self._presets_confirmed = set() # (string)
# If it could be possible to do fine alignment, allow the user to choose
if self._can_fine_align(self._tab_data_model.streams.value):
self.chkbox_fine_align.Show()
# Set to True to make it the default, but will be automatically
# disabled later if the current visible streams don't allow it.
self.chkbox_fine_align.Value = True
for s in self._tab_data_model.streams.value:
if isinstance(s, EMStream):
em_det = s.detector
em_emt = s.emitter
elif isinstance(s, OpticalStream):
opt_det = s.detector
self._ovrl_stream = stream.OverlayStream("Fine alignment", opt_det,
em_emt, em_det)
self._ovrl_stream.dwellTime.value = self._main_data_model.fineAlignDwellTime.value
else:
self.chkbox_fine_align.Show(False)
self.chkbox_fine_align.Value = False
self._prev_fine_align = self.chkbox_fine_align.Value
# make sure the view displays the same thing as the one we are
# duplicating
self._view.view_pos.value = orig_view.view_pos.value
self._view.mpp.value = orig_view.mpp.value
self._view.merge_ratio.value = orig_view.merge_ratio.value
# attach the view to the viewport
self.pnl_view_acq.canvas.fit_view_to_next_image = False
self.pnl_view_acq.setView(self._view, self._tab_data_model)
self.Bind(wx.EVT_CHAR_HOOK, self.on_key)
self.btn_cancel.Bind(wx.EVT_BUTTON, self.on_close)
self.btn_change_file.Bind(wx.EVT_BUTTON, self.on_change_file)
self.btn_secom_acquire.Bind(wx.EVT_BUTTON, self.on_acquire)
self.cmb_presets.Bind(wx.EVT_COMBOBOX, self.on_preset)
self.Bind(wx.EVT_CLOSE, self.on_close)
# on_streams_changed is compatible because it doesn't use the args
self.chkbox_fine_align.Bind(wx.EVT_CHECKBOX, self.on_streams_changed)
self.on_preset(None) # will force setting the current preset
# TODO: use the presets VAs and subscribe to each of them, instead of
# using pub/sub messages
pub.subscribe(self.on_setting_change, 'setting.changed')
# TODO: we should actually listen to the stream tree, but it's not
# currently possible. => listen to .flat once it's there
# Currently just use view.lastUpdate which should be "similar"
# (but doesn't work if the stream contains no image)
self._view.lastUpdate.subscribe(self.on_streams_changed)
def __init__(self, parent, orig_tab_data):
xrcfr_acq.__init__(self, parent)
self.conf = get_acqui_conf()
for n in presets:
self.cmb_presets.Append(n)
# TODO: record and reuse the preset used?
self.cmb_presets.Select(0)
self.filename = model.StringVA(create_filename(self.conf.last_path, self.conf.fn_ptn,
self.conf.last_extension, self.conf.fn_count))
self.filename.subscribe(self._onFilename, init=True)
# The name of the last file that got written to disk (used for auto viewing on close)
self.last_saved_file = None
# True when acquisition occurs
self.acquiring = False
# a ProgressiveFuture if the acquisition is going on
self.acq_future = None
self._acq_future_connector = None
self._main_data_model = orig_tab_data.main
# duplicate the interface, but with only one view
self._tab_data_model = self.duplicate_tab_data_model(orig_tab_data)
# Create a new settings controller for the acquisition dialog
self._settings_controller = SecomSettingsController(
self,
self._tab_data_model,
highlight_change=True # also adds a "Reset" context menu
)
orig_view = orig_tab_data.focussedView.value
self._view = self._tab_data_model.focussedView.value
self._hidden_view = StreamView("Plugin View Hidden")
self.streambar_controller = StreamBarController(self._tab_data_model,
self.pnl_secom_streams,
static=True,
ignore_view=True)
# The streams currently displayed are the one visible
self.add_all_streams()
# The list of streams ready for acquisition (just used as a cache)
self._acq_streams = {}
# FIXME: pass the fold_panels
# Compute the preset values for each preset
self._preset_values = {} # dict string -> dict (SettingEntries -> value)
self._orig_entries = get_global_settings_entries(self._settings_controller)
for sc in self.streambar_controller.stream_controllers:
self._orig_entries += get_local_settings_entries(sc)
self._orig_settings = preset_as_is(self._orig_entries) # to detect changes
for n, preset in presets.items():
self._preset_values[n] = preset(self._orig_entries)
# Presets which have been confirmed on the hardware
self._presets_confirmed = set() # (string)
self.start_listening_to_va()
# If it could be possible to do fine alignment, allow the user to choose
if self._can_fine_align(self._tab_data_model.streams.value):
self.chkbox_fine_align.Show()
# Set to True to make it the default, but will be automatically
# disabled later if the current visible streams don't allow it.
self.chkbox_fine_align.Value = True
for s in self._tab_data_model.streams.value:
if isinstance(s, EMStream):
em_det = s.detector
em_emt = s.emitter
elif isinstance(s, OpticalStream) and not isinstance(s, ScannedFluoStream):
opt_det = s.detector
self._ovrl_stream = stream.OverlayStream("Fine alignment", opt_det, em_emt, em_det,
opm=self._main_data_model.opm)
self._ovrl_stream.dwellTime.value = self._main_data_model.fineAlignDwellTime.value
else:
self.chkbox_fine_align.Show(False)
self.chkbox_fine_align.Value = False
self._prev_fine_align = self.chkbox_fine_align.Value
# make sure the view displays the same thing as the one we are
# duplicating
self._view.view_pos.value = orig_view.view_pos.value
self._view.mpp.value = orig_view.mpp.value
self._view.merge_ratio.value = orig_view.merge_ratio.value
# attach the view to the viewport
self.pnl_view_acq.canvas.fit_view_to_next_image = False
self.pnl_view_acq.setView(self._view, self._tab_data_model)
# The TOOL_ROA is not present because we don't allow the user to change
# the ROA), so we need to explicitly request the canvas to show the ROA.
if hasattr(self._tab_data_model, "roa") and self._tab_data_model.roa is not None:
cnvs = self.pnl_view_acq.canvas
self.roa_overlay = RepetitionSelectOverlay(cnvs, self._tab_data_model.roa,
self._tab_data_model.fovComp)
cnvs.add_world_overlay(self.roa_overlay)
self.Bind(wx.EVT_CHAR_HOOK, self.on_key)
self.btn_cancel.Bind(wx.EVT_BUTTON, self.on_close)
self.btn_change_file.Bind(wx.EVT_BUTTON, self.on_change_file)
self.btn_secom_acquire.Bind(wx.EVT_BUTTON, self.on_acquire)
self.cmb_presets.Bind(wx.EVT_COMBOBOX, self.on_preset)
self.Bind(wx.EVT_CLOSE, self.on_close)
# on_streams_changed is compatible because it doesn't use the args
self.chkbox_fine_align.Bind(wx.EVT_CHECKBOX, self.on_streams_changed)
self.on_preset(None) # will force setting the current preset
# To update the estimated time when streams are removed/added
self._view.stream_tree.flat.subscribe(self.on_streams_changed)
self._hidden_view.stream_tree.flat.subscribe(self.on_streams_changed)