def test_roa_select_overlay_va(self):
sem = simsem.SimSEM(**CONFIG_SEM)
for child in sem.children.value:
if child.name == CONFIG_SCANNER["name"]:
ebeam = child
# Simulate a stage move
ebeam.updateMetadata({model.MD_POS: (1e-3, -0.2e-3)})
# but it should be a simple miccanvas
cnvs = miccanvas.DblMicroscopeCanvas(self.panel)
self.add_control(cnvs, wx.EXPAND, proportion=1, clear=True)
roa = model.TupleVA(UNDEFINED_ROI)
rsol = wol.RepetitionSelectOverlay(cnvs, roa=roa, scanner=ebeam)
rsol.activate()
cnvs.add_world_overlay(rsol)
cnvs.scale = 100000
cnvs.update_drawing()
# Undefined ROA => sel = None
roi_back = rsol.get_physical_sel()
self.assertEqual(roi_back, None)
# Full FoV
roa.value = (0, 0, 1, 1)
test.gui_loop(0.1)
# Expect the whole SEM FoV
fov = compute_scanner_fov(ebeam)
ebeam_rect = get_fov_rect(ebeam, fov)
roi_back = rsol.get_physical_sel()
for o, b in zip(ebeam_rect, roi_back):
self.assertAlmostEqual(o,
b,
msg="ebeam FoV (%s) != ROI (%s)" %
(ebeam_rect, roi_back))
# Hald the FoV
roa.value = (0.25, 0.25, 0.75, 0.75)
test.gui_loop(0.1)
# Expect the whole SEM FoV
fov = compute_scanner_fov(ebeam)
fov = (fov[0] / 2, fov[1] / 2)
ebeam_rect = get_fov_rect(ebeam, fov)
roi_back = rsol.get_physical_sel()
for o, b in zip(ebeam_rect, roi_back):
self.assertAlmostEqual(o,
b,
msg="ebeam FoV (%s) != ROI (%s)" %
(ebeam_rect, roi_back))
test.gui_loop()
sem.terminate()
def test_roa_select_overlay_va(self):
sem = simsem.SimSEM(**CONFIG_SEM)
for child in sem.children.value:
if child.name == CONFIG_SCANNER["name"]:
ebeam = child
# Simulate a stage move
ebeam.updateMetadata({model.MD_POS: (1e-3, -0.2e-3)})
# but it should be a simple miccanvas
cnvs = miccanvas.DblMicroscopeCanvas(self.panel)
self.add_control(cnvs, wx.EXPAND, proportion=1, clear=True)
roa = model.TupleVA(UNDEFINED_ROI)
rsol = wol.RepetitionSelectOverlay(cnvs, roa=roa, scanner=ebeam)
rsol.activate()
cnvs.add_world_overlay(rsol)
cnvs.scale = 100000
cnvs.update_drawing()
# Undefined ROA => sel = None
roi_back = rsol.get_physical_sel()
self.assertEqual(roi_back, None)
# Full FoV
roa.value = (0, 0, 1, 1)
test.gui_loop(0.1)
# Expect the whole SEM FoV
fov = compute_scanner_fov(ebeam)
ebeam_rect = get_fov_rect(ebeam, fov)
roi_back = rsol.get_physical_sel()
for o, b in zip(ebeam_rect, roi_back):
self.assertAlmostEqual(o, b, msg="ebeam FoV (%s) != ROI (%s)" % (ebeam_rect, roi_back))
# Hald the FoV
roa.value = (0.25, 0.25, 0.75, 0.75)
test.gui_loop(0.1)
# Expect the whole SEM FoV
fov = compute_scanner_fov(ebeam)
fov = (fov[0] / 2, fov[1] / 2)
ebeam_rect = get_fov_rect(ebeam, fov)
roi_back = rsol.get_physical_sel()
for o, b in zip(ebeam_rect, roi_back):
self.assertAlmostEqual(o, b, msg="ebeam FoV (%s) != ROI (%s)" % (ebeam_rect, roi_back))
test.gui_loop()
sem.terminate()
def test_camera_fov(self):
# Move a little bit out of the origin, to make it less easy
self.stage.moveAbsSync({"x": 1e-3, "y": 5e-3})
fov = compute_camera_fov(self.ccd)
rect = get_fov_rect(self.ccd, fov)
# Compare to the actual FoV of an acquired image
im = self.ccd.data.get()
pxs_im = im.metadata[model.MD_PIXEL_SIZE]
fov_im = im.shape[1] * pxs_im[0], im.shape[0] * pxs_im[1]
self.assertEqual(fov, fov_im)
center_im = im.metadata[model.MD_POS]
rect_im = (center_im[0] - fov_im[0] / 2, center_im[1] - fov_im[1] / 2,
center_im[0] + fov_im[0] / 2, center_im[1] + fov_im[1] / 2)
self.assertEqual(rect, rect_im)
def test_camera_fov(self):
# Move a little bit out of the origin, to make it less easy
self.stage.moveAbsSync({"x": 1e-3, "y": 5e-3})
fov = compute_camera_fov(self.ccd)
rect = get_fov_rect(self.ccd, fov)
# Compare to the actual FoV of an acquired image
im = self.ccd.data.get()
pxs_im = im.metadata[model.MD_PIXEL_SIZE]
fov_im = im.shape[1] * pxs_im[0], im.shape[0] * pxs_im[1]
self.assertEqual(fov, fov_im)
center_im = im.metadata[model.MD_POS]
rect_im = (center_im[0] - fov_im[0] / 2,
center_im[1] - fov_im[1] / 2 ,
center_im[0] + fov_im[0] / 2,
center_im[1] + fov_im[1] / 2)
self.assertEqual(rect, rect_im)