def reset(yes):
"""
Remove all the datastores and the database of the current user
"""
ok = yes or confirm('Do you really want to destroy all your data? (y/n) ')
if not ok:
return
dbpath = os.path.realpath(os.path.expanduser(config.dbserver.file))
# user must be able to access and write the databse file to remove it
if os.path.isfile(dbpath) and os.access(dbpath, os.W_OK):
if dbserver.get_status() == 'running':
if config.dbserver.multi_user:
sys.exit('The oq dbserver must be stopped '
'before proceeding')
else:
pid = logs.dbcmd('getpid')
os.kill(pid, signal.SIGTERM)
time.sleep(.5) # give time to stop
assert dbserver.get_status() == 'not-running'
print('dbserver stopped')
try:
os.remove(dbpath)
print('Removed %s' % dbpath)
except OSError as exc:
print(exc, file=sys.stderr)
# fast way of removing everything
purge_all(fast=True) # datastore of the current user
def reset(yes):
"""
Remove all the datastores and the database of the current user
"""
ok = yes or confirm('Do you really want to destroy all your data? (y/n) ')
if not ok:
return
dbpath = os.path.realpath(os.path.expanduser(config.dbserver.file))
# user must be able to access and write the databse file to remove it
if os.path.isfile(dbpath) and os.access(dbpath, os.W_OK):
if dbserver.get_status() == 'running':
if config.dbserver.multi_user:
sys.exit('The oq dbserver must be stopped '
'before proceeding')
else:
pid = logs.dbcmd('getpid')
os.kill(pid, signal.SIGTERM)
time.sleep(.5) # give time to stop
assert dbserver.get_status() == 'not-running'
print('dbserver stopped')
try:
os.remove(dbpath)
print('Removed %s' % dbpath)
except OSError as exc:
print(exc, file=sys.stderr)
# fast way of removing everything
purge_all(fast=True) # datastore of the current user
def main(yes=False):
"""
Remove all the datastores and the database of the current user
"""
ok = yes or confirm('Do you really want to destroy all your data? (y/n) ')
if not ok:
return
dbpath = os.path.realpath(os.path.expanduser(config.dbserver.file))
if not os.path.isfile(dbpath):
sys.exit('%s does not exist' % dbpath)
else:
dbserver.ensure_on() # start the dbserver in a subprocess
user = getpass.getuser()
for calc_id in logs.dbcmd('get_calc_ids', user):
purge_one(calc_id, user, force=True)
if os.access(dbpath, os.W_OK): # single user mode
purge_all(user) # calculations in oqdata not in the db
# stop the dbserver first
pid = logs.dbcmd('getpid')
os.kill(pid, signal.SIGTERM)
time.sleep(.5) # give time to stop
assert dbserver.get_status() == 'not-running'
print('dbserver stopped')
# remove the database
os.remove(dbpath)
print('Removed %s' % dbpath)
def reset(yes):
"""
Remove all the datastores and the database of the current user
"""
ok = yes or confirm('Do you really want to destroy all your data? (y/n) ')
if not ok:
return
dbpath = os.path.realpath(
os.path.expanduser(config.get('dbserver', 'file')))
# user must be able to access and write the databse file to remove it
if os.path.isfile(dbpath) and os.access(dbpath, os.W_OK):
if dbserver.get_status() == 'running':
if config.flag_set('dbserver', 'multi_user'):
sys.exit('The oq dbserver must be stopped '
'before proceeding')
else:
logs.dbcmd('stop')
print('dbserver stopped')
try:
os.remove(dbpath)
print('Removed %s' % dbpath)
except OSError as exc:
print(exc, file=sys.stderr)
# fast way of removing everything
purge_all(fast=True) # datastore of the current user
def delete_calculation(job_id, confirmed=False):
"""
Delete a calculation and all associated outputs.
"""
if confirmed or utils.confirm(
'Are you sure you want to delete this calculation and all '
'associated outputs?\nThis action cannot be undone. (y/n): '):
try:
del_calc(job_id)
except RuntimeError as err:
print(err)
def delete_calculation(job_id, confirmed=False):
"""
Delete a calculation and all associated outputs.
"""
if confirmed or utils.confirm(
'Are you sure you want to delete this calculation and all '
'associated outputs?\nThis action cannot be undone. (y/n): '):
try:
del_calc(job_id)
except RuntimeError as err:
print(err)
def del_calculation(job_id, confirmed=False):
"""
Delete a calculation and all associated outputs.
"""
if confirmed or confirm(
'Are you sure you want to delete this calculation and all '
'associated outputs?\nThis action cannot be undone. (y/n): '):
try:
logs.dbcmd('del_calc', job_id, getpass.getuser())
except RuntimeError as err:
print(err)
def del_calculation(job_id, confirmed=False):
"""
Delete a calculation and all associated outputs.
"""
if confirmed or confirm(
'Are you sure you want to delete this calculation and all '
'associated outputs?\nThis action cannot be undone. (y/n): '):
try:
logs.dbcmd('del_calc', job_id, getpass.getuser())
except RuntimeError as err:
safeprint(err)
def del_calculation(job_id, confirmed=False):
"""
Delete a calculation and all associated outputs.
"""
if logs.dbcmd('get_job', job_id) is None:
print('There is no job %d' % job_id)
return
if confirmed or confirm(
'Are you sure you want to (abort and) delete this calculation and '
'all associated outputs?\nThis action cannot be undone. (y/n): '):
try:
abort(job_id)
logs.dbcmd('del_calc', job_id, getpass.getuser())
except RuntimeError as err:
safeprint(err)
else:
print('Removed %d' % job_id)
def del_calculation(job_id, confirmed=False):
"""
Delete a calculation and all associated outputs.
"""
if logs.dbcmd('get_job', job_id) is None:
print('There is no job %d' % job_id)
return
if confirmed or confirm(
'Are you sure you want to (abort and) delete this calculation and '
'all associated outputs?\nThis action cannot be undone. (y/n): '):
try:
abort(job_id)
resp = logs.dbcmd('del_calc', job_id, getpass.getuser())
except RuntimeError as err:
safeprint(err)
else:
if 'success' in resp:
print('Removed %d' % job_id)
else:
print(resp['error'])
def engine(log_file, no_distribute, yes, config_file, make_html_report,
upgrade_db, version_db, what_if_I_upgrade,
run_hazard, run_risk, run,
list_hazard_calculations, list_risk_calculations,
delete_calculation, delete_uncompleted_calculations,
hazard_calculation_id, list_outputs, show_log,
export_output, export_outputs, exports='',
log_level='info'):
"""
Run a calculation using the traditional command line API
"""
config.abort_if_no_config_available()
if run or run_hazard or run_risk:
# the logging will be configured in engine.py
pass
else:
# configure a basic logging
logging.basicConfig(level=logging.INFO)
if config_file:
os.environ[config.OQ_CONFIG_FILE_VAR] = os.path.abspath(
os.path.expanduser(config_file))
config.refresh()
if no_distribute:
os.environ['OQ_DISTRIBUTE'] = 'no'
# check if the datadir exists
if not os.path.exists(datastore.DATADIR):
os.makedirs(datastore.DATADIR)
dbserver.ensure_on()
if upgrade_db:
logs.set_level('info')
msg = logs.dbcmd('what_if_I_upgrade', 'read_scripts')
if msg.startswith('Your database is already updated'):
pass
elif yes or confirm('Proceed? (y/n) '):
logs.dbcmd('upgrade_db')
sys.exit(0)
if version_db:
print(logs.dbcmd('version_db'))
sys.exit(0)
if what_if_I_upgrade:
print(logs.dbcmd('what_if_I_upgrade', 'extract_upgrade_scripts'))
sys.exit(0)
# check if the db is outdated
outdated = logs.dbcmd('check_outdated')
if outdated:
sys.exit(outdated)
# hazard or hazard+risk
if hazard_calculation_id:
hc_id = get_job_id(hazard_calculation_id)
else:
hc_id = None
if run:
job_inis = [os.path.expanduser(ini) for ini in run.split(',')]
if len(job_inis) not in (1, 2):
sys.exit('%s should be a .ini filename or a pair of filenames '
'separated by a comma' % run)
for job_ini in job_inis:
open(job_ini).read() # raise an IOError if the file does not exist
log_file = os.path.expanduser(log_file) \
if log_file is not None else None
if len(job_inis) == 2:
# run hazard
job_id = run_job(job_inis[0], log_level,
log_file, exports)
# run risk
run_job(job_inis[1], log_level, log_file,
exports, hazard_calculation_id=job_id)
else:
run_job(
os.path.expanduser(run), log_level, log_file,
exports, hazard_calculation_id=hc_id)
# hazard
elif list_hazard_calculations:
for line in logs.dbcmd(
'list_calculations', 'hazard', getpass.getuser()):
print(line)
elif run_hazard is not None:
print('WARN: --rh/--run-hazard are deprecated, use --run instead',
file=sys.stderr)
log_file = os.path.expanduser(log_file) \
if log_file is not None else None
run_job(os.path.expanduser(run_hazard), log_level,
log_file, exports)
elif delete_calculation is not None:
del_calculation(delete_calculation, yes)
# risk
elif list_risk_calculations:
for line in logs.dbcmd('list_calculations', 'risk', getpass.getuser()):
print(line)
elif run_risk is not None:
print('WARN: --rr/--run-risk are deprecated, use --run instead',
file=sys.stderr)
if hazard_calculation_id is None:
sys.exit(MISSING_HAZARD_MSG)
log_file = os.path.expanduser(log_file) \
if log_file is not None else None
run_job(
os.path.expanduser(run_risk),
log_level, log_file, exports,
hazard_calculation_id=hc_id)
# export
elif make_html_report:
print('Written %s' % make_report(make_html_report))
sys.exit(0)
elif list_outputs is not None:
hc_id = get_job_id(list_outputs)
for line in logs.dbcmd('list_outputs', hc_id):
print(line)
elif show_log is not None:
hc_id = get_job_id(show_log)
for line in logs.dbcmd('get_log', hc_id):
print(line)
elif export_output is not None:
output_id, target_dir = export_output
dskey, calc_id, datadir = logs.dbcmd('get_output', int(output_id))
for line in core.export_output(
dskey, calc_id, datadir, os.path.expanduser(target_dir),
exports or 'xml,csv'):
print(line)
elif export_outputs is not None:
job_id, target_dir = export_outputs
hc_id = get_job_id(job_id)
for line in core.export_outputs(
hc_id, os.path.expanduser(target_dir), exports or 'xml,csv'):
print(line)
elif delete_uncompleted_calculations:
logs.dbcmd('delete_uncompleted_calculations', getpass.getuser())
else:
engine.parentparser.prog = 'oq engine'
engine.parentparser.print_usage()
def main(no_distribute=False,
yes=False,
upgrade_db=False,
db_version=False,
what_if_I_upgrade=False,
list_hazard_calculations=False,
list_risk_calculations=False,
delete_uncompleted_calculations=False,
multi=False,
reuse_input=False,
*,
log_file=None,
make_html_report=None,
run=None,
delete_calculation: int = None,
hazard_calculation_id: int = None,
list_outputs: int = None,
show_log=None,
export_output=None,
export_outputs=None,
param='',
config_file=None,
exports='',
log_level='info'):
"""
Run a calculation using the traditional command line API
"""
if not run:
# configure a basic logging
logs.init()
if config_file:
config.read(os.path.abspath(os.path.expanduser(config_file)),
soft_mem_limit=int,
hard_mem_limit=int,
port=int,
multi_user=valid.boolean,
serialize_jobs=valid.boolean,
strict=valid.boolean,
code=exec)
if no_distribute:
os.environ['OQ_DISTRIBUTE'] = 'no'
# check if the datadir exists
datadir = datastore.get_datadir()
if not os.path.exists(datadir):
os.makedirs(datadir)
dbserver.ensure_on()
# check if we are talking to the right server
err = dbserver.check_foreign()
if err:
sys.exit(err)
if upgrade_db:
msg = logs.dbcmd('what_if_I_upgrade', 'read_scripts')
if msg.startswith('Your database is already updated'):
pass
elif yes or confirm('Proceed? (y/n) '):
logs.dbcmd('upgrade_db')
sys.exit(0)
if db_version:
safeprint(logs.dbcmd('db_version'))
sys.exit(0)
if what_if_I_upgrade:
safeprint(logs.dbcmd('what_if_I_upgrade', 'extract_upgrade_scripts'))
sys.exit(0)
# check if the db is outdated
outdated = logs.dbcmd('check_outdated')
if outdated:
sys.exit(outdated)
# hazard or hazard+risk
if hazard_calculation_id == -1:
# get the latest calculation of the current user
hc_id = get_job_id(hazard_calculation_id, getpass.getuser())
elif hazard_calculation_id:
# make it possible to use calculations made by another user
hc_id = get_job_id(hazard_calculation_id)
else:
hc_id = None
if run:
pars = dict(p.split('=', 1) for p in param.split(',')) if param else {}
if reuse_input:
pars['cachedir'] = datadir
if hc_id:
pars['hazard_calculation_id'] = str(hc_id)
log_file = os.path.expanduser(log_file) \
if log_file is not None else None
job_inis = [os.path.expanduser(f) for f in run]
pars['multi'] = multi
run_jobs(job_inis, log_level, log_file, exports, **pars)
# hazard
elif list_hazard_calculations:
for line in logs.dbcmd('list_calculations', 'hazard',
getpass.getuser()):
safeprint(line)
elif delete_calculation is not None:
del_calculation(delete_calculation, yes)
# risk
elif list_risk_calculations:
for line in logs.dbcmd('list_calculations', 'risk', getpass.getuser()):
safeprint(line)
# export
elif make_html_report:
safeprint('Written %s' % make_report(make_html_report))
sys.exit(0)
elif list_outputs is not None:
hc_id = get_job_id(list_outputs)
for line in logs.dbcmd('list_outputs', hc_id):
safeprint(line)
elif show_log is not None:
hc_id = get_job_id(show_log)
for line in logs.dbcmd('get_log', hc_id):
safeprint(line)
elif export_output is not None:
output_id, target_dir = export_output
dskey, calc_id, datadir = logs.dbcmd('get_output', int(output_id))
for line in core.export_output(dskey, calc_id, datadir,
os.path.expanduser(target_dir), exports
or DEFAULT_EXPORTS):
safeprint(line)
elif export_outputs is not None:
job_id, target_dir = export_outputs
hc_id = get_job_id(job_id)
for line in core.export_outputs(hc_id, os.path.expanduser(target_dir),
exports or DEFAULT_EXPORTS):
safeprint(line)
elif delete_uncompleted_calculations:
logs.dbcmd('delete_uncompleted_calculations', getpass.getuser())
else:
print("Please pass some option, see oq engine --help")
def engine(log_file, no_distribute, yes, config_file, make_html_report,
upgrade_db, db_version, what_if_I_upgrade,
run_hazard, run_risk, run,
list_hazard_calculations, list_risk_calculations,
delete_calculation, delete_uncompleted_calculations,
hazard_calculation_id, list_outputs, show_log,
export_output, export_outputs, exports='',
log_level='info'):
"""
Run a calculation using the traditional command line API
"""
if run or run_hazard or run_risk:
# the logging will be configured in engine.py
pass
else:
# configure a basic logging
logging.basicConfig(level=logging.INFO)
if config_file:
config.load(os.path.abspath(os.path.expanduser(config_file)))
if no_distribute:
os.environ['OQ_DISTRIBUTE'] = 'no'
# check if the datadir exists
datadir = datastore.get_datadir()
if not os.path.exists(datadir):
os.makedirs(datadir)
dbserver.ensure_on()
# check if we are talking to the right server
err = dbserver.check_foreign()
if err:
sys.exit(err)
if upgrade_db:
logs.set_level('info')
msg = logs.dbcmd('what_if_I_upgrade', 'read_scripts')
if msg.startswith('Your database is already updated'):
pass
elif yes or confirm('Proceed? (y/n) '):
logs.dbcmd('upgrade_db')
sys.exit(0)
if db_version:
safeprint(logs.dbcmd('db_version'))
sys.exit(0)
if what_if_I_upgrade:
safeprint(logs.dbcmd('what_if_I_upgrade', 'extract_upgrade_scripts'))
sys.exit(0)
# check if the db is outdated
outdated = logs.dbcmd('check_outdated')
if outdated:
sys.exit(outdated)
# hazard or hazard+risk
if hazard_calculation_id:
hc_id = get_job_id(hazard_calculation_id)
else:
hc_id = None
if run:
job_ini = os.path.expanduser(run)
open(job_ini, 'rb').read() # IOError if the file does not exist
log_file = os.path.expanduser(log_file) \
if log_file is not None else None
run_job(os.path.expanduser(run), log_level, log_file,
exports, hazard_calculation_id=hc_id)
# hazard
elif list_hazard_calculations:
for line in logs.dbcmd(
'list_calculations', 'hazard', getpass.getuser()):
safeprint(line)
elif run_hazard is not None:
safeprint('WARN: --rh/--run-hazard are deprecated, use --run instead',
file=sys.stderr)
log_file = os.path.expanduser(log_file) \
if log_file is not None else None
run_job(os.path.expanduser(run_hazard), log_level,
log_file, exports)
elif delete_calculation is not None:
del_calculation(delete_calculation, yes)
# risk
elif list_risk_calculations:
for line in logs.dbcmd('list_calculations', 'risk', getpass.getuser()):
safeprint(line)
elif run_risk is not None:
safeprint('WARN: --rr/--run-risk are deprecated, use --run instead',
file=sys.stderr)
if hazard_calculation_id is None:
sys.exit(MISSING_HAZARD_MSG)
log_file = os.path.expanduser(log_file) \
if log_file is not None else None
run_job(
os.path.expanduser(run_risk),
log_level, log_file, exports,
hazard_calculation_id=hc_id)
# export
elif make_html_report:
safeprint('Written %s' % make_report(make_html_report))
sys.exit(0)
elif list_outputs is not None:
hc_id = get_job_id(list_outputs)
for line in logs.dbcmd('list_outputs', hc_id):
safeprint(line)
elif show_log is not None:
hc_id = get_job_id(show_log)
for line in logs.dbcmd('get_log', hc_id):
safeprint(line)
elif export_output is not None:
output_id, target_dir = export_output
dskey, calc_id, datadir = logs.dbcmd('get_output', int(output_id))
for line in core.export_output(
dskey, calc_id, datadir, os.path.expanduser(target_dir),
exports or 'csv,xml'):
safeprint(line)
elif export_outputs is not None:
job_id, target_dir = export_outputs
hc_id = get_job_id(job_id)
for line in core.export_outputs(
hc_id, os.path.expanduser(target_dir), exports or 'csv,xml'):
safeprint(line)
elif delete_uncompleted_calculations:
logs.dbcmd('delete_uncompleted_calculations', getpass.getuser())
else:
engine.parentparser.prog = 'oq engine'
engine.parentparser.print_usage()
def main():
arg_parser = set_up_arg_parser()
args = arg_parser.parse_args()
exports = args.exports or 'xml,csv'
if args.version:
print __version__
sys.exit(0)
if args.run or args.run_hazard or args.run_risk:
# the logging will be configured in engine.py
pass
else:
# configure a basic logging
logging.basicConfig(level=logging.INFO)
if args.config_file:
os.environ[config.OQ_CONFIG_FILE_VAR] = \
abspath(expanduser(args.config_file))
config.refresh()
if args.no_distribute:
os.environ['OQ_DISTRIBUTE'] = 'no'
if args.upgrade_db:
logs.set_level('info')
msg = upgrade_manager.what_if_I_upgrade(
conn, extract_scripts='read_scripts')
print msg
if msg.startswith('Your database is already updated'):
pass
elif args.yes or utils.confirm('Proceed? (y/n) '):
upgrade_manager.upgrade_db(conn)
sys.exit(0)
if args.version_db:
print upgrade_manager.version_db(conn)
sys.exit(0)
if args.what_if_I_upgrade:
print upgrade_manager.what_if_I_upgrade(conn)
sys.exit(0)
# check if the db is outdated
outdated = dbcmd('check_outdated')
if outdated:
sys.exit(outdated)
# hazard or hazard+risk
hc_id = args.hazard_calculation_id
if hc_id:
hc_id = int(hc_id)
if hc_id < 0:
# make it possible to run `oq-engine --run job_risk.ini --hc -1`
hc_id = dbcmd('get_hc_id', hc_id)
if args.run:
job_inis = map(expanduser, args.run.split(','))
if len(job_inis) not in (1, 2):
sys.exit('%s should be a .ini filename or a pair of filenames '
'separated by a comma' % args.run)
for job_ini in job_inis:
open(job_ini).read() # raise an IOError if the file does not exist
log_file = expanduser(args.log_file) \
if args.log_file is not None else None
if len(job_inis) == 2:
# run hazard
job_id = run_job(job_inis[0], args.log_level,
log_file, args.exports)
# run risk
run_job(job_inis[1], args.log_level, log_file,
args.exports, hazard_calculation_id=job_id)
else:
run_job(
expanduser(args.run), args.log_level, log_file,
args.exports, hazard_calculation_id=hc_id)
# hazard
elif args.list_hazard_calculations:
dbcmd('list_calculations', 'hazard')
elif args.run_hazard is not None:
log_file = expanduser(args.log_file) \
if args.log_file is not None else None
run_job(expanduser(args.run_hazard), args.log_level,
log_file, args.exports)
elif args.delete_calculation is not None:
dbcmd('delete_calculation', args.delete_calculation, args.yes)
# risk
elif args.list_risk_calculations:
dbcmd('list_calculations', 'risk')
elif args.run_risk is not None:
if args.hazard_calculation_id is None:
sys.exit(MISSING_HAZARD_MSG)
log_file = expanduser(args.log_file) \
if args.log_file is not None else None
run_job(
expanduser(args.run_risk),
args.log_level, log_file, args.exports,
hazard_calculation_id=hc_id)
# export
elif args.make_html_report:
print 'Written', make_report(conn, args.make_html_report)
sys.exit(0)
elif args.list_outputs is not None:
hc_id = dbcmd('get_hc_id', args.list_outputs)
dbcmd('list_outputs', hc_id)
elif args.show_view is not None:
job_id, view_name = args.show_view
print views.view(view_name, datastore.read(int(job_id)))
elif args.show_log is not None:
hc_id = dbcmd('get_hc_id', args.show_log[0])
print dbcmd('get_log', hc_id)
elif args.export_output is not None:
output_id, target_dir = args.export_output
dbcmd('export_output', int(output_id), expanduser(target_dir),
exports)
elif args.export_outputs is not None:
job_id, target_dir = args.export_outputs
hc_id = dbcmd('get_hc_id', job_id)
dbcmd('export_outputs', hc_id, expanduser(target_dir), exports)
elif args.delete_uncompleted_calculations:
dbcmd('delete_uncompleted_calculations')
else:
arg_parser.print_usage()
def engine(log_file,
no_distribute,
yes,
config_file,
make_html_report,
upgrade_db,
db_version,
what_if_I_upgrade,
run,
list_hazard_calculations,
list_risk_calculations,
delete_calculation,
delete_uncompleted_calculations,
hazard_calculation_id,
list_outputs,
show_log,
export_output,
export_outputs,
exports='',
log_level='info',
reuse_hazard=False):
"""
Run a calculation using the traditional command line API
"""
if not run:
# configure a basic logging
logs.init()
if config_file:
config.read(os.path.abspath(os.path.expanduser(config_file)),
soft_mem_limit=int,
hard_mem_limit=int,
port=int,
multi_user=valid.boolean,
multi_node=valid.boolean)
if no_distribute:
os.environ['OQ_DISTRIBUTE'] = 'no'
# check if the datadir exists
datadir = datastore.get_datadir()
if not os.path.exists(datadir):
os.makedirs(datadir)
dbserver.ensure_on()
# check if we are talking to the right server
err = dbserver.check_foreign()
if err:
sys.exit(err)
if upgrade_db:
msg = logs.dbcmd('what_if_I_upgrade', 'read_scripts')
if msg.startswith('Your database is already updated'):
pass
elif yes or confirm('Proceed? (y/n) '):
logs.dbcmd('upgrade_db')
sys.exit(0)
if db_version:
safeprint(logs.dbcmd('db_version'))
sys.exit(0)
if what_if_I_upgrade:
safeprint(logs.dbcmd('what_if_I_upgrade', 'extract_upgrade_scripts'))
sys.exit(0)
# check if the db is outdated
outdated = logs.dbcmd('check_outdated')
if outdated:
sys.exit(outdated)
# hazard or hazard+risk
if hazard_calculation_id == -1:
# get the latest calculation of the current user
hc_id = get_job_id(hazard_calculation_id, getpass.getuser())
elif hazard_calculation_id:
# make it possible to use calculations made by another user
hc_id = get_job_id(hazard_calculation_id)
else:
hc_id = None
if run:
log_file = os.path.expanduser(log_file) \
if log_file is not None else None
job_inis = [os.path.expanduser(f) for f in run]
if len(job_inis) == 1 and not hc_id:
# init logs before calling get_oqparam
logs.init('nojob', getattr(logging, log_level.upper()))
# not using logs.handle that logs on the db
oq = readinput.get_oqparam(job_inis[0])
smart_run(job_inis[0], oq, log_level, log_file, exports,
reuse_hazard)
return
for i, job_ini in enumerate(job_inis):
open(job_ini, 'rb').read() # IOError if the file does not exist
job_id = run_job(job_ini,
log_level,
log_file,
exports,
hazard_calculation_id=hc_id)
if not hc_id: # use the first calculation as base for the others
hc_id = job_id
# hazard
elif list_hazard_calculations:
for line in logs.dbcmd('list_calculations', 'hazard',
getpass.getuser()):
safeprint(line)
elif delete_calculation is not None:
del_calculation(delete_calculation, yes)
# risk
elif list_risk_calculations:
for line in logs.dbcmd('list_calculations', 'risk', getpass.getuser()):
safeprint(line)
# export
elif make_html_report:
safeprint('Written %s' % make_report(make_html_report))
sys.exit(0)
elif list_outputs is not None:
hc_id = get_job_id(list_outputs)
for line in logs.dbcmd('list_outputs', hc_id):
safeprint(line)
elif show_log is not None:
hc_id = get_job_id(show_log)
for line in logs.dbcmd('get_log', hc_id):
safeprint(line)
elif export_output is not None:
output_id, target_dir = export_output
dskey, calc_id, datadir = logs.dbcmd('get_output', int(output_id))
for line in core.export_output(dskey, calc_id, datadir,
os.path.expanduser(target_dir), exports
or 'csv,xml'):
safeprint(line)
elif export_outputs is not None:
job_id, target_dir = export_outputs
hc_id = get_job_id(job_id)
for line in core.export_outputs(hc_id, os.path.expanduser(target_dir),
exports or 'csv,xml'):
safeprint(line)
elif delete_uncompleted_calculations:
logs.dbcmd('delete_uncompleted_calculations', getpass.getuser())
else:
engine.parentparser.prog = 'oq engine'
engine.parentparser.print_usage()
def engine(log_file, no_distribute, yes, config_file, make_html_report,
upgrade_db, db_version, what_if_I_upgrade, run,
list_hazard_calculations, list_risk_calculations,
delete_calculation, delete_uncompleted_calculations,
hazard_calculation_id, list_outputs, show_log,
export_output, export_outputs, exports='',
log_level='info', reuse_hazard=False):
"""
Run a calculation using the traditional command line API
"""
if not run:
# configure a basic logging
logs.init()
if config_file:
config.read(os.path.abspath(os.path.expanduser(config_file)),
soft_mem_limit=int, hard_mem_limit=int, port=int,
multi_user=valid.boolean, multi_node=valid.boolean)
if no_distribute:
os.environ['OQ_DISTRIBUTE'] = 'no'
# check if the datadir exists
datadir = datastore.get_datadir()
if not os.path.exists(datadir):
os.makedirs(datadir)
dbserver.ensure_on()
# check if we are talking to the right server
err = dbserver.check_foreign()
if err:
sys.exit(err)
if upgrade_db:
msg = logs.dbcmd('what_if_I_upgrade', 'read_scripts')
if msg.startswith('Your database is already updated'):
pass
elif yes or confirm('Proceed? (y/n) '):
logs.dbcmd('upgrade_db')
sys.exit(0)
if db_version:
safeprint(logs.dbcmd('db_version'))
sys.exit(0)
if what_if_I_upgrade:
safeprint(logs.dbcmd('what_if_I_upgrade', 'extract_upgrade_scripts'))
sys.exit(0)
# check if the db is outdated
outdated = logs.dbcmd('check_outdated')
if outdated:
sys.exit(outdated)
# hazard or hazard+risk
if hazard_calculation_id == -1:
# get the latest calculation of the current user
hc_id = get_job_id(hazard_calculation_id, getpass.getuser())
elif hazard_calculation_id:
# make it possible to use calculations made by another user
hc_id = get_job_id(hazard_calculation_id)
else:
hc_id = None
if run:
log_file = os.path.expanduser(log_file) \
if log_file is not None else None
job_inis = [os.path.expanduser(f) for f in run]
if len(job_inis) == 1 and not hc_id:
# init logs before calling get_oqparam
logs.init('nojob', getattr(logging, log_level.upper()))
# not using logs.handle that logs on the db
oq = readinput.get_oqparam(job_inis[0])
smart_run(job_inis[0], oq, log_level, log_file,
exports, reuse_hazard)
return
for i, job_ini in enumerate(job_inis):
open(job_ini, 'rb').read() # IOError if the file does not exist
job_id = run_job(job_ini, log_level, log_file,
exports, hazard_calculation_id=hc_id)
if not hc_id: # use the first calculation as base for the others
hc_id = job_id
# hazard
elif list_hazard_calculations:
for line in logs.dbcmd(
'list_calculations', 'hazard', getpass.getuser()):
safeprint(line)
elif delete_calculation is not None:
del_calculation(delete_calculation, yes)
# risk
elif list_risk_calculations:
for line in logs.dbcmd('list_calculations', 'risk', getpass.getuser()):
safeprint(line)
# export
elif make_html_report:
safeprint('Written %s' % make_report(make_html_report))
sys.exit(0)
elif list_outputs is not None:
hc_id = get_job_id(list_outputs)
for line in logs.dbcmd('list_outputs', hc_id):
safeprint(line)
elif show_log is not None:
hc_id = get_job_id(show_log)
for line in logs.dbcmd('get_log', hc_id):
safeprint(line)
elif export_output is not None:
output_id, target_dir = export_output
dskey, calc_id, datadir = logs.dbcmd('get_output', int(output_id))
for line in core.export_output(
dskey, calc_id, datadir, os.path.expanduser(target_dir),
exports or 'csv,xml'):
safeprint(line)
elif export_outputs is not None:
job_id, target_dir = export_outputs
hc_id = get_job_id(job_id)
for line in core.export_outputs(
hc_id, os.path.expanduser(target_dir), exports or 'csv,xml'):
safeprint(line)
elif delete_uncompleted_calculations:
logs.dbcmd('delete_uncompleted_calculations', getpass.getuser())
else:
engine.parentparser.prog = 'oq engine'
engine.parentparser.print_usage()
def main():
arg_parser = set_up_arg_parser()
args = arg_parser.parse_args()
exports = args.exports or 'xml,csv'
if args.version:
print openquake.engine.__version__
sys.exit(0)
if args.run or args.run_hazard or args.run_risk:
# the logging will be configured in engine.py
pass
else:
# configure a basic logging
logging.basicConfig(level=logging.INFO)
if args.config_file:
os.environ[config.OQ_CONFIG_FILE_VAR] = \
abspath(expanduser(args.config_file))
config.refresh()
if args.no_distribute:
os.environ['OQ_DISTRIBUTE'] = 'no'
# check if the DbServer is up
sock = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
try:
err = sock.connect_ex(config.DBS_ADDRESS)
finally:
sock.close()
if err:
multi_user = valid.boolean(config.get('dbserver', 'multi_user'))
if multi_user:
sys.exit('Please start the DbServer: '
'see the documentation for details')
# otherwise start the DbServer automatically
dblog = os.path.expanduser('~/oq-dbserver.log')
subprocess.Popen([sys.executable, '-m', 'openquake.server.dbserver',
'-l', 'INFO'], stderr=open(dblog, 'w'))
if args.upgrade_db:
logs.set_level('info')
msg = logs.dbcmd('what_if_I_upgrade', 'read_scripts')
if msg.startswith('Your database is already updated'):
pass
elif args.yes or confirm('Proceed? (y/n) '):
logs.dbcmd('upgrade_db')
sys.exit(0)
if args.version_db:
print logs.dbcmd('version_db')
sys.exit(0)
if args.what_if_I_upgrade:
print logs.dbcmd('what_if_I_upgrade', 'extract_upgrade_scripts')
sys.exit(0)
# check if the db is outdated
outdated = logs.dbcmd('check_outdated')
if outdated:
sys.exit(outdated)
# hazard or hazard+risk
if args.hazard_calculation_id:
hc_id = get_job_id(args.hazard_calculation_id)
else:
hc_id = None
if args.run:
job_inis = map(expanduser, args.run.split(','))
if len(job_inis) not in (1, 2):
sys.exit('%s should be a .ini filename or a pair of filenames '
'separated by a comma' % args.run)
for job_ini in job_inis:
open(job_ini).read() # raise an IOError if the file does not exist
log_file = expanduser(args.log_file) \
if args.log_file is not None else None
if len(job_inis) == 2:
# run hazard
job_id = run_job(job_inis[0], args.log_level,
log_file, args.exports)
# run risk
run_job(job_inis[1], args.log_level, log_file,
args.exports, hazard_calculation_id=job_id)
else:
run_job(
expanduser(args.run), args.log_level, log_file,
args.exports, hazard_calculation_id=hc_id)
# hazard
elif args.list_hazard_calculations:
for line in logs.dbcmd(
'list_calculations', 'hazard', getpass.getuser()):
print line
elif args.run_hazard is not None:
log_file = expanduser(args.log_file) \
if args.log_file is not None else None
run_job(expanduser(args.run_hazard), args.log_level,
log_file, args.exports)
elif args.delete_calculation is not None:
delete_calculation(args.delete_calculation, args.yes)
# risk
elif args.list_risk_calculations:
for line in logs.dbcmd('list_calculations', 'risk', getpass.getuser()):
print line
elif args.run_risk is not None:
if args.hazard_calculation_id is None:
sys.exit(MISSING_HAZARD_MSG)
log_file = expanduser(args.log_file) \
if args.log_file is not None else None
run_job(
expanduser(args.run_risk),
args.log_level, log_file, args.exports,
hazard_calculation_id=hc_id)
# export
elif args.make_html_report:
print 'Written', make_report(args.make_html_report)
sys.exit(0)
elif args.list_outputs is not None:
hc_id = get_job_id(args.list_outputs)
for line in logs.dbcmd('list_outputs', hc_id):
print line
elif args.show_view is not None:
job_id, view_name = args.show_view
print views.view(view_name, datastore.read(int(job_id)))
elif args.show_log is not None:
hc_id = get_job_id(args.show_log[0])
for line in logs.dbcmd('get_log', hc_id):
print line
elif args.export_output is not None:
output_id, target_dir = args.export_output
dskey, calc_id, datadir = logs.dbcmd('get_output', int(output_id))
for line in core.export_output(
dskey, calc_id, datadir, expanduser(target_dir), exports):
print line
elif args.export_outputs is not None:
job_id, target_dir = args.export_outputs
hc_id = get_job_id(job_id)
for line in core.export_outputs(
hc_id, expanduser(target_dir), exports):
print line
elif args.delete_uncompleted_calculations:
logs.dbcmd('delete_uncompleted_calculations', getpass.getuser())
else:
arg_parser.print_usage()
def main():
arg_parser = set_up_arg_parser()
args = arg_parser.parse_args()
exports = args.exports or 'xml,csv'
if args.version:
print __version__
sys.exit(0)
if args.run or args.run_hazard or args.run_risk:
# the logging will be configured in engine.py
pass
else:
# configure a basic logging
logging.basicConfig(level=logging.INFO)
if args.config_file:
os.environ[utils.config.OQ_CONFIG_FILE_VAR] = \
abspath(expanduser(args.config_file))
utils.config.refresh()
if args.no_distribute:
os.environ[openquake.engine.NO_DISTRIBUTE_VAR] = '1'
if args.upgrade_db:
logs.set_level('info')
msg = upgrade_manager.what_if_I_upgrade(
conn, extract_scripts='read_scripts')
print msg
if msg.startswith('Your database is already updated'):
pass
elif args.yes or utils.confirm('Proceed? (y/n) '):
upgrade_manager.upgrade_db(conn)
sys.exit(0)
if args.version_db:
print upgrade_manager.version_db(conn)
sys.exit(0)
if args.what_if_I_upgrade:
print upgrade_manager.what_if_I_upgrade(conn)
sys.exit(0)
# check if the db is outdated
outdated = dbcmd('check_outdated')
if outdated:
sys.exit(outdated)
# hazard or hazard+risk
hc_id = args.hazard_calculation_id
if hc_id and int(hc_id) < 0:
# make it possible commands like `oq-engine --run job_risk.ini --hc -1`
hc_id = dbcmd('get_hc_id', int(hc_id))
if args.run:
job_inis = map(expanduser, args.run.split(','))
if len(job_inis) not in (1, 2):
sys.exit('%s should be a .ini filename or a pair of filenames '
'separated by a comma' % args.run)
for job_ini in job_inis:
open(job_ini).read() # raise an IOError if the file does not exist
log_file = expanduser(args.log_file) \
if args.log_file is not None else None
if len(job_inis) == 2:
# run hazard
job_id = run_job(job_inis[0], args.log_level,
log_file, args.exports)
# run risk
run_job(job_inis[1], args.log_level, log_file,
args.exports, hazard_calculation_id=job_id)
else:
run_job(
expanduser(args.run), args.log_level, log_file,
args.exports, hazard_calculation_id=hc_id)
# hazard
elif args.list_hazard_calculations:
dbcmd('list_calculations', 'hazard')
elif args.run_hazard is not None:
log_file = expanduser(args.log_file) \
if args.log_file is not None else None
run_job(expanduser(args.run_hazard), args.log_level,
log_file, args.exports)
elif args.delete_calculation is not None:
dbcmd('delete_calculation', args.delete_calculation, args.yes)
# risk
elif args.list_risk_calculations:
dbcmd('list_calculations', 'risk')
elif args.run_risk is not None:
if args.hazard_calculation_id is None:
sys.exit(MISSING_HAZARD_MSG)
log_file = expanduser(args.log_file) \
if args.log_file is not None else None
run_job(
expanduser(args.run_risk),
args.log_level, log_file, args.exports,
hazard_calculation_id=hc_id)
# export
elif args.make_html_report:
print 'Written', make_report(conn, args.make_html_report)
sys.exit(0)
elif args.list_outputs is not None:
hc_id = dbcmd('get_hc_id', args.list_outputs)
dbcmd('list_outputs', hc_id)
elif args.show_view is not None:
job_id, view_name = args.show_view
print views.view(view_name, datastore.read(int(job_id)))
elif args.show_log is not None:
hc_id = dbcmd('get_hc_id', args.show_log[0])
print dbcmd('get_log', hc_id)
elif args.export_output is not None:
output_id, target_dir = args.export_output
dbcmd('export_output', int(output_id), expanduser(target_dir),
exports)
elif args.export_outputs is not None:
job_id, target_dir = args.export_outputs
hc_id = dbcmd('get_hc_id', job_id)
dbcmd('export_outputs', hc_id, expanduser(target_dir), exports)
elif args.delete_uncompleted_calculations:
dbcmd('delete_uncompleted_calculations')
else:
arg_parser.print_usage()