def setUp(self):
db_configs = []
for engine in _get_installed_database_engines():
config = TestDatabaseConfiguration(protocol=engine)
db_configs.append(config)
self.test_db = "OpusDatabaseTestDatabase"
test_table = "test_table"
self.dbs = []
for config in db_configs:
try:
server = DatabaseServer(config)
if server.has_database(self.test_db):
server.drop_database(self.test_db)
server.create_database(self.test_db)
self.assertTrue(server.has_database(database_name=self.test_db))
db = OpusDatabase(database_server_configuration=config, database_name=self.test_db)
self.assertFalse(db.table_exists(test_table))
self.dbs.append((db, server))
except:
import traceback
traceback.print_exc()
logger.log_warning("Could not start server for protocol %s" % config.protocol)
def setUp(self):
db_configs = []
for engine in get_testable_engines():
config = TestDatabaseConfiguration(protocol = engine)
db_configs.append(config)
self.database_name = 'test_database'
self.dbs = []
for config in db_configs:
try:
server = DatabaseServer(config)
if server.has_database(self.database_name):
server.drop_database(self.database_name)
server.create_database(self.database_name)
self.assertTrue(server.has_database(database_name = self.database_name))
db = OpusDatabase(database_server_configuration = config,
database_name = self.database_name)
storage = sql_storage(
storage_location = db
)
self.dbs.append((db,server,storage))
self.storage = storage
except:
import traceback
traceback.print_exc()
print 'WARNING: could not start server for protocol %s'%config.protocol
def setUp(self):
db_configs = []
for engine in _get_installed_database_engines():
config = TestDatabaseConfiguration(protocol=engine)
db_configs.append(config)
self.test_db = 'OpusDatabaseTestDatabase'
test_table = 'test_table'
self.dbs = []
for config in db_configs:
try:
server = DatabaseServer(config)
if server.has_database(self.test_db):
server.drop_database(self.test_db)
server.create_database(self.test_db)
self.assertTrue(
server.has_database(database_name=self.test_db))
db = OpusDatabase(database_server_configuration=config,
database_name=self.test_db)
self.assertFalse(db.table_exists(test_table))
self.dbs.append((db, server))
except:
import traceback
traceback.print_exc()
logger.log_warning('Could not start server for protocol %s' %
config.protocol)
def setUp(self):
db_configs = []
for engine in get_testable_engines():
config = TestDatabaseConfiguration(protocol=engine)
db_configs.append(config)
self.database_name = 'test_database'
self.dbs = []
for config in db_configs:
try:
server = DatabaseServer(config)
if server.has_database(self.database_name):
server.drop_database(self.database_name)
server.create_database(self.database_name)
self.assertTrue(
server.has_database(database_name=self.database_name))
db = OpusDatabase(database_server_configuration=config,
database_name=self.database_name)
storage = sql_storage(storage_location=db)
self.dbs.append((db, server, storage))
self.storage = storage
except:
import traceback
traceback.print_exc()
print 'WARNING: could not start server for protocol %s' % config.protocol
class AbstractServiceTests(opus_unittest.OpusTestCase):
def setUp(self):
self.database_name = 'test_services_database'
self.config = TestDatabaseConfiguration(
database_name=self.database_name)
self.db_server = DatabaseServer(self.config)
def tearDown(self):
self.db_server.drop_database(self.database_name)
self.db_server.close()
def test_create_when_already_exists(self):
"""Shouldn't do anything if the database already exists."""
self.db_server.create_database(self.database_name)
db = self.db_server.get_database(self.database_name)
self.assertFalse(db.table_exists('run_activity'))
self.assertFalse(db.table_exists('computed_indicators'))
services = AbstractService(self.config)
services.services_db.close()
self.assertTrue(db.table_exists('run_activity'))
self.assertTrue(db.table_exists('computed_indicators'))
def test_create(self):
"""Should create services tables if the database doesn't exist."""
services = AbstractService(self.config)
services.services_db.close()
self.assertTrue(self.db_server.has_database(self.database_name))
db = self.db_server.get_database(self.database_name)
self.assertTrue(db.table_exists('run_activity'))
self.assertTrue(db.table_exists('computed_indicators'))
def prepare_for_simulation(self, run_configuration, cache_directory=None):
self.config = Resources(run_configuration)
self.simulation_state = SimulationState(new_instance=True,
base_cache_dir=cache_directory)
### TODO: Get rid of this! There is no good reason to be changing the
### Configuration.
if self.config['cache_directory'] is None:
self.config[
'cache_directory'] = self.simulation_state.get_cache_directory(
)
SessionConfiguration(
new_instance=True,
package_order=self.config['dataset_pool_configuration'].
package_order,
in_storage=AttributeCache())
ForkProcess().fork_new_process(
self.config['creating_baseyear_cache_configuration'].
cache_scenario_database, self.config)
# Create output database (normally done by run manager)
if 'estimation_database_configuration' in self.config:
db_server = DatabaseServer(
self.config['estimation_database_configuration'])
if not db_server.has_database(
self.config['estimation_database_configuration'].
database_name):
db_server.create_database(
self.config['estimation_database_configuration'].
database_name)
class AbstractServiceTests(opus_unittest.OpusTestCase):
def setUp(self):
self.database_name = 'test_services_database'
self.config = TestDatabaseConfiguration(database_name = self.database_name)
self.db_server = DatabaseServer(self.config)
def tearDown(self):
self.db_server.drop_database(self.database_name)
self.db_server.close()
def test_create_when_already_exists(self):
"""Shouldn't do anything if the database already exists."""
self.db_server.create_database(self.database_name)
db = self.db_server.get_database(self.database_name)
self.assertFalse(db.table_exists('run_activity'))
self.assertFalse(db.table_exists('computed_indicators'))
services = AbstractService(self.config)
services.services_db.close()
self.assertTrue(db.table_exists('run_activity'))
self.assertTrue(db.table_exists('computed_indicators'))
def test_create(self):
"""Should create services tables if the database doesn't exist."""
services = AbstractService(self.config)
services.services_db.close()
self.assertTrue(self.db_server.has_database(self.database_name))
db = self.db_server.get_database(self.database_name)
self.assertTrue(db.table_exists('run_activity'))
self.assertTrue(db.table_exists('computed_indicators'))
def create_storage(self):
try:
server = DatabaseServer(self.server_config)
except:
logger.log_error(
'Cannot connect to the database server that the services database is hosted on %s.'
% self.server_config.database_name)
raise
if not server.has_database(self.server_config.database_name):
server.create_database(self.server_config.database_name)
try:
services_db = server.get_database(self.server_config.database_name)
except:
logger.log_error('Cannot connect to a services database on %s.' %
server.get_connection_string(scrub=True))
raise
metadata.bind = services_db.engine
setup_all()
create_all()
return services_db
def prepare_for_simulation(self, run_configuration, cache_directory=None):
self.config = Resources(run_configuration)
self.simulation_state = SimulationState(
new_instance=True, base_cache_dir=cache_directory, start_time=self.config.get("base_year", 0)
)
### TODO: Get rid of this! There is no good reason to be changing the
### Configuration.
if self.config["cache_directory"] is None:
self.config["cache_directory"] = self.simulation_state.get_cache_directory()
SessionConfiguration(
new_instance=True,
package_order=self.config["dataset_pool_configuration"].package_order,
in_storage=AttributeCache(),
)
ForkProcess().fork_new_process(
self.config["creating_baseyear_cache_configuration"].cache_scenario_database, self.config
)
# Create output database (normally done by run manager)
if "estimation_database_configuration" in self.config:
db_server = DatabaseServer(self.config["estimation_database_configuration"])
if not db_server.has_database(self.config["estimation_database_configuration"].database_name):
db_server.create_database(self.config["estimation_database_configuration"].database_name)
def run_run(self, run_resources, run_name = None, run_as_multiprocess=True, run_in_background=False):
"""check run hasn't already been marked running
log it in to run_activity
run simulation
mark run as done/failed
"""
if not self.ready_to_run:
raise 'RunManager.setup_new_run must be execute before RunManager.run_run'
if run_resources['cache_directory'] != self.current_cache_directory:
raise 'The configuration and the RunManager conflict on the proper cache_directory'
self.add_row_to_history(self.run_id, run_resources, "started", run_name = run_name)
try:
# Test pre-conditions
model_system_class_path = run_resources.get('model_system', None)
if model_system_class_path is None:
raise TypeError, ("The configuration must specify model_system, the"
" full Opus path to the model system to be used.")
# Create baseyear cache
self.create_baseyear_cache(run_resources)
# Create brand-new output database (deletes any prior contents)
if 'estimation_database_configuration' in run_resources:
db_server = DatabaseServer(run_resources['estimation_database_configuration'])
if not db_server.has_database(run_resources['estimation_database_configuration'].database_name):
db_server.create_database(run_resources['estimation_database_configuration'].database_name)
# Run simulation
exec('from %s import ModelSystem' % model_system_class_path)
model_system = ModelSystem()
self.model_system = model_system
if 'base_year' not in run_resources:
run_resources['base_year'] = run_resources['years'][0] - 1
self._create_seed_dictionary(run_resources)
# model_system.run_in_same_process(run_resources)
if run_as_multiprocess:
model_system.run_multiprocess(run_resources)
else:
model_system.run_in_one_process(run_resources, run_in_background=run_in_background, class_path=model_system_class_path)
self.model_system = None
except:
self.add_row_to_history(self.run_id, run_resources, "failed", run_name = run_name)
self.ready_to_run = False
raise # This re-raises the last exception
else:
self.add_row_to_history(self.run_id, run_resources, "done", run_name = run_name)
self.ready_to_run = False
return self.run_id
def save_results(self, out_storage=None, model_name=None):
if self.specification is None or self.coefficients is None:
raise ValueError, "model specification or coefficient is None"
#invalid = self.coefficients.is_invalid()
if False:
logger.log_warning('Invalid coefficients. Not saving results!')
return
if model_name is None:
model_name = self.config.get('model_name_for_coefficients', None)
if model_name is None:
if self.model_name is not None:
model_name = self.model_name
else:
raise ValueError, "model_name unspecified"
out_storage_available = True
if out_storage:
pass
elif 'estimation_database_configuration' in self.config:
try:
db_server = DatabaseServer(self.config['estimation_database_configuration'])
database_name = self.config["estimation_database_configuration"].database_name
if not db_server.has_database(database_name):
db_server.create_database(database_name)
output_db = db_server.get_database(database_name)
out_storage = StorageFactory().get_storage(
type='sql_storage',
storage_location=output_db)
except:
logger.log_warning("Problem with connecting database given by 'estimation_database_configuration'.")
out_storage_available = False
else:
logger.log_warning("No estimation_database_configuration given.")
out_storage_available = False
# the original model name of development_project_lcm is too long as a mysql db table name, truncate it
if model_name.rfind("_development_project_location_choice_model") >=0:
model_name = model_name.replace('_project', '')
specification_table = '%s_specification' % model_name
coefficients_table = '%s_coefficients' % model_name
if out_storage_available:
logger.start_block("Writing specification and coefficients into storage given by 'estimation_database_configuration'")
self.specification.write(out_storage=out_storage, out_table_name=specification_table)
self.coefficients.write(out_storage=out_storage, out_table_name=coefficients_table)
logger.end_block()
logger.start_block("Writing specification and coefficients into %s" % AttributeCache().get_storage_location())
self.specification.write(out_storage=AttributeCache(), out_table_name=specification_table)
self.coefficients.write(out_storage=AttributeCache(), out_table_name=coefficients_table)
logger.end_block()
def save_results(self, out_storage=None, model_name=None):
if self.specification is None or self.coefficients is None:
raise ValueError, "model specification or coefficient is None"
#invalid = self.coefficients.is_invalid()
if False:
logger.log_warning('Invalid coefficients. Not saving results!')
return
if model_name is None:
model_name = self.config.get('model_name_for_coefficients', None)
if model_name is None:
if self.model_name is not None:
model_name = self.model_name
else:
raise ValueError, "model_name unspecified"
out_storage_available = True
if out_storage:
pass
elif 'estimation_database_configuration' in self.config:
try:
db_server = DatabaseServer(self.config['estimation_database_configuration'])
database_name = self.config["estimation_database_configuration"].database_name
if not db_server.has_database(database_name):
db_server.create_database(database_name)
output_db = db_server.get_database(database_name)
out_storage = StorageFactory().get_storage(
type='sql_storage',
storage_location=output_db)
except:
logger.log_warning("Problem with connecting database given by 'estimation_database_configuration'.")
out_storage_available = False
else:
logger.log_warning("No estimation_database_configuration given.")
out_storage_available = False
# the original model name of development_project_lcm is too long as a mysql db table name, truncate it
if model_name.rfind("_development_project_location_choice_model") >=0:
model_name = model_name.replace('_project', '')
specification_table = '%s_specification' % model_name
coefficients_table = '%s_coefficients' % model_name
if out_storage_available:
logger.start_block("Writing specification and coefficients into storage given by 'estimation_database_configuration'")
self.specification.write(out_storage=out_storage, out_table_name=specification_table)
self.coefficients.write(out_storage=out_storage, out_table_name=coefficients_table)
logger.end_block()
logger.start_block("Writing specification and coefficients into %s" % AttributeCache().get_storage_location())
self.specification.write(out_storage=AttributeCache(), out_table_name=specification_table)
self.coefficients.write(out_storage=AttributeCache(), out_table_name=coefficients_table)
logger.end_block()
def prepare_for_run(self, database_configuration, database_name):
## sql protocol, hostname, username and password are set in
## $OPUS_HOME/settings/database_server_setting.xml
db_config = DatabaseConfiguration(database_name=database_name, database_configuration=database_configuration)
db_server = DatabaseServer(db_config)
if not db_server.has_database(database_name):
db_server.create_database(database_name)
db = db_server.get_database(database_name)
self.out_storage = sql_storage(storage_location=db)
return self.out_storage
def __init__(self,
indicator_directory,
name = None,
output_type = None,
storage_location = None,
output_style = ALL,
fixed_field_format = None # Only used with the 'fixed_field' output type
):
if output_type == 'sql' and not isinstance(storage_location, DatabaseConfiguration):
raise Exception("If Table output_type is 'sql', a Database object must be passed as storage_location.")
elif output_type in ['dbf', 'csv', 'tab', 'esri', 'fixed_field'] and \
storage_location is not None and \
not isinstance(storage_location,str):
raise Exception("If Table output_type is %s, storage_location must be a path to the output directory"%output_type)
elif output_type not in ['dbf', 'csv', 'tab', 'sql', 'esri', 'fixed_field']:
raise Exception("Table output_type must be either dbf, csv, tab, sql, esri, fixed_field, not %s"%output_type)
if output_type == "fixed_field" and not fixed_field_format:
raise ValueError("If Table output_type is 'fixed_field', an XML format string must be passed as fixed_field_format.")
self.fixed_field_format = fixed_field_format
if output_style not in [Table.ALL,
Table.PER_YEAR,
Table.PER_ATTRIBUTE]:
raise Exception(('%s output_style is not appropriate.'%output_style,
'Choose from Table.ALL, Table.PER_YEAR, ',
'and Table.PER_ATTRIBUTE'))
self.output_type = output_type
self.output_style = output_style
if storage_location is None:
storage_location = indicator_directory
elif output_type == 'sql':
server = DatabaseServer(database_server_configuration = storage_location)
if not server.has_database(database_name = storage_location.database_name):
server.create_database(database_name = storage_location.database_name)
storage_location = server.get_database(
database_name = storage_location.database_name)
self.storage_location = storage_location
self.output_storage = StorageFactory().get_storage(
type = '%s_storage'%(self.output_type),
storage_location = storage_location
)
self.name = name
self.indicator_directory = indicator_directory
def create_storage(self):
try:
server = DatabaseServer(self.server_config)
except:
logger.log_error('Cannot connect to the database server that the services database is hosted on %s.' % self.server_config.database_name)
raise
if not server.has_database(self.server_config.database_name):
server.create_database(self.server_config.database_name)
try:
services_db = server.get_database(self.server_config.database_name)
except:
logger.log_error('Cannot connect to a services database on %s.'% server.get_connection_string(scrub = True))
raise
metadata.bind = services_db.engine
setup_all()
create_all()
return services_db
(options, args) = parser.parse_args()
cache_path = options.cache_path
database_name = options.database_name
if database_name is None or cache_path is None:
parser.print_help()
sys.exit(1)
table_name = options.table_name
logger.log_status('Initializing database...')
db_server = DatabaseServer(
EstimationDatabaseConfiguration(
database_name=database_name,
database_configuration=options.database_configuration))
if not db_server.has_database(
database_name): # if only one table should be exported,
db_server.create_database(database_name) # the database can exist
db = db_server.get_database(database_name)
input_storage = flt_storage(storage_location=cache_path)
output_storage = sql_storage(storage_location=db)
logger.start_block('Exporting cache to sql...')
try:
if table_name is None:
ExportStorage().export(in_storage=input_storage,
out_storage=output_storage)
else:
db.drop_table(table_name)
cache_path = options.cache_path
database_name = options.database_name
if database_name is None or cache_path is None:
parser.print_help()
sys.exit(1)
table_name = options.table_name
logger.log_status('Initializing database...')
db_server = DatabaseServer(EstimationDatabaseConfiguration(
database_name = database_name,
database_configuration = options.database_configuration
)
)
if not db_server.has_database(database_name): # if only one table should be exported,
db_server.create_database(database_name) # the database can exist
db = db_server.get_database(database_name)
input_storage = flt_storage(storage_location = cache_path)
output_storage = sql_storage(
storage_location = db)
with logger.block('Exporting cache to sql...'):
if table_name is None:
ExportStorage().export(in_storage=input_storage, out_storage=output_storage)
else:
db.drop_table(table_name)
ExportStorage().export_dataset(table_name, in_storage=input_storage, out_storage=output_storage)
class AbstractFunctionalTest(object):
protocol = ''
def setUp(self):
self.db_config = TestDatabaseConfiguration(protocol=self.protocol)
self.db_config_node = self.db_config._database_configuration_node()
self.db_server = DatabaseServer(self.db_config)
self.test_db = 'OpusDatabaseTestDatabase'
self.export_from_cache_opus_path = "opus_core.tools.do_export_cache_to_sql"
self.export_to_cache_opus_path = "opus_core.tools.do_export_sql_to_cache"
self.year = 1000
self.temp_dir = tempfile.mkdtemp(prefix='opus_tmp')
self.test_data = {
self.year: {
'table_a': {
'tablea_id': array([1, 2, 3]),
'tablea_id_name': array(['1', '2', '3']),
'value1': array([1.0, 2.001, 3], dtype='float'),
'value2':
array([True, False, False], dtype='i'
), ## sqlit is having problem handling bool type
},
'table_b': {
'tableb_id': array([1, 2, 3]),
'tableb_id_name': array(['one', 'two', 'three']),
'value3': array([1.0, 2.001, 3], dtype='float'),
},
},
}
cache_creator = CreateTestAttributeCache()
cache_creator.create_attribute_cache_with_data(self.temp_dir,
self.test_data)
def tearDown(self):
if self.db_server.has_database(self.test_db):
self.db_server.drop_database(self.test_db)
self.db_server.close()
if os.path.exists(self.temp_dir):
rmtree(self.temp_dir)
def test_export_all_tables(self):
logger.log_status("Test export all tables for %s with %s" %
(self.protocol, self.__class__))
optional_args = [
'-c',
os.path.join(self.temp_dir, str(self.year)), '-d', self.test_db,
'--database_configuration=%s' % self.db_config_node
]
self._call_script(self.export_from_cache_opus_path, args=optional_args)
self.assertTrue(
self.db_server.has_database(database_name=self.test_db))
db = OpusDatabase(database_server_configuration=self.db_config,
database_name=self.test_db)
table_names = self.test_data[self.year].keys()
existing_tables = db.get_tables_in_database()
self.assertEqual(set(existing_tables), set(table_names))
## export data from db to cache
export_year = str(self.year + 100)
exp_dir = os.path.join(self.temp_dir, export_year)
optional_args = [
'-d', self.test_db, '-c', self.temp_dir, '-y', export_year,
'--database_configuration=%s' % self.db_config_node
]
self._call_script(self.export_to_cache_opus_path, args=optional_args)
exported_datasets = [os.path.split(f)[1] for f in glob(exp_dir + '/*')]
self.assertEqual(set(exported_datasets), set(table_names))
org_dir = os.path.join(self.temp_dir, str(self.year))
self._two_caches_are_identical(org_dir, exp_dir)
db.close()
self.db_server.drop_database(self.test_db)
rmtree(exp_dir)
def test_export_one_table(self):
logger.log_status("Test export single table for %s with %s" %
(self.protocol, self.__class__))
for table_name in self.test_data[self.year].keys():
self._test_export_one_table(table_name)
def _test_export_one_table(self, table_name):
optional_args = [
'-c',
os.path.join(self.temp_dir, str(self.year)), '-d', self.test_db,
'-t', table_name,
'--database_configuration=%s' % self.db_config_node
]
self._call_script(self.export_from_cache_opus_path, args=optional_args)
self.assertTrue(
self.db_server.has_database(database_name=self.test_db))
db = OpusDatabase(database_server_configuration=self.db_config,
database_name=self.test_db)
existing_tables = db.get_tables_in_database()
self.assertEqual(set(existing_tables), set([table_name]))
export_year = str(self.year + 100)
exp_dir = os.path.join(self.temp_dir, export_year)
optional_args = [
'-d', self.test_db, '-c', self.temp_dir, '-y', export_year, '-t',
table_name,
'--database_configuration=%s' % self.db_config_node
]
self._call_script(self.export_to_cache_opus_path, args=optional_args)
exported_datasets = [
os.path.split(f)[1]
for f in glob(os.path.join(self.temp_dir, export_year) + '/*')
]
self.assertEqual(set(exported_datasets), set([table_name]))
org_dir = os.path.join(self.temp_dir, str(self.year))
self._two_caches_are_identical(org_dir,
exp_dir,
table_names=[table_name])
db.close()
self.db_server.drop_database(self.test_db)
rmtree(exp_dir)
def _call_script(self, opus_path, args):
Popen(" %s %s %s" %
(sys.executable, module_path_from_opus_path(opus_path),
' '.join(args)),
shell=True).communicate()
def _two_caches_are_identical(self, cache_a, cache_b, table_names=None):
""" Check to see if two caches contains identical datasets
even though their data types can be different
"""
if table_names is None:
table_names = os.listdir(cache_a)
for table_name in table_names:
field_names_a = glob(os.path.join(cache_a, table_name) + '/*')
field_names_b = glob(os.path.join(cache_b, table_name) + '/*')
self.assertEqual(len(field_names_a), len(field_names_b))
field_names_a.sort()
field_names_b.sort()
[
self.assertTrue(cmp(f_a, f_b))
for f_a, f_b in zip(field_names_a, field_names_b)
]
db_server = DatabaseServer(DatabaseConfiguration(
database_name = database_name,
database_configuration = options.database_configuration
)
)
db = db_server.get_database(database_name)
directory = db
if storage_outtype == 'sql':
database_name = output_file
db_server = DatabaseServer(DatabaseConfiguration(
database_name = database_name,
database_configuration = options.database_configuration
)
)
if not db_server.has_database(database_name):
db_server.create_database(database_name)
db = db_server.get_database(database_name)
output_file = db
input_storage = StorageFactory().get_storage('%s_storage' % storage_intype, storage_location = directory)
output_storage = StorageFactory().get_storage('%s_storage' % storage_outtype, storage_location = output_file)
if storage_outtype in create_output_directory and not os.path.exists(output_file):
os.makedirs(output_file)
logger.start_block("Converting table '%s' from %s into %s ..." % (table_name, storage_intype, storage_outtype))
kwargs = {'nchunks': nchunks}
for arg in arg_list.get(storage_outtype, []):
kwargs[arg] = getattr(options, arg, None)
try:
if storage_intype == 'sql':
database_name = directory
db_server = DatabaseServer(
DatabaseConfiguration(
database_name=database_name,
database_configuration=options.database_configuration))
db = db_server.get_database(database_name)
directory = db
if storage_outtype == 'sql':
database_name = output_file
db_server = DatabaseServer(
DatabaseConfiguration(
database_name=database_name,
database_configuration=options.database_configuration))
if not db_server.has_database(database_name):
db_server.create_database(database_name)
db = db_server.get_database(database_name)
output_file = db
input_storage = StorageFactory().get_storage('%s_storage' % storage_intype,
storage_location=directory)
output_storage = StorageFactory().get_storage('%s_storage' %
storage_outtype,
storage_location=output_file)
if storage_outtype in create_output_directory and not os.path.exists(
output_file):
os.makedirs(output_file)
logger.start_block("Converting table '%s' from %s into %s ..." %
def test__output_types(self):
output_types = ['csv', 'tab', 'fixed_field']
try:
import dbfpy
except ImportError:
pass
else:
output_types.append('dbf')
try:
test_db_name = 'test_db_for_indicator_framework'
database_config = DatabaseConfiguration(
database_name=test_db_name,
test=True,
)
server = DatabaseServer(database_config)
server.drop_database(database_name=test_db_name)
server.create_database(database_name=test_db_name)
except:
has_sql = False
else:
has_sql = True
output_types.append('sql')
indicator = Indicator(dataset_name='test',
attribute='opus_core.test.attribute')
maker = Maker(project_name='test', test=True)
computed_indicators = maker.create_batch(
indicators={'attr1': indicator}, source_data=self.source_data)
for output_type in output_types:
kwargs = {}
if output_type == 'sql':
kwargs['storage_location'] = database_config
elif output_type == 'fixed_field':
kwargs[
'fixed_field_format'] = '<fixed_field><field name="attribute_1980" format="10f" /></fixed_field>'
table = Table(
indicator_directory=self.source_data.get_indicator_directory(),
output_type=output_type,
**kwargs)
table._create_input_stores(self.source_data.years)
viz_result = table.visualize(
indicators_to_visualize=['attr1'],
computed_indicators=computed_indicators)[0]
if output_type in ['csv', 'dbf', 'tab', 'fixed_field']:
self.assertTrue(
os.path.exists(
os.path.join(
viz_result.storage_location,
viz_result.table_name + '.' +
viz_result.file_extension)))
elif output_type == 'sql':
self.assertTrue(server.has_database(test_db_name))
db = server.get_database(test_db_name)
self.assertTrue(
db.table_exists(table_name=viz_result.table_name))
if has_sql:
server.drop_database(database_name=test_db_name)
def __init__(
self,
indicator_directory,
name=None,
output_type=None,
storage_location=None,
output_style=ALL,
fixed_field_format=None # Only used with the 'fixed_field' output type
):
if output_type == 'sql' and not isinstance(storage_location,
DatabaseConfiguration):
raise Exception(
"If Table output_type is 'sql', a Database object must be passed as storage_location."
)
elif output_type in ['dbf', 'csv', 'tab', 'esri', 'fixed_field'] and \
storage_location is not None and \
not isinstance(storage_location,str):
raise Exception(
"If Table output_type is %s, storage_location must be a path to the output directory"
% output_type)
elif output_type not in [
'dbf', 'csv', 'tab', 'sql', 'esri', 'fixed_field'
]:
raise Exception(
"Table output_type must be either dbf, csv, tab, sql, esri, fixed_field, not %s"
% output_type)
if output_type == "fixed_field" and not fixed_field_format:
raise ValueError(
"If Table output_type is 'fixed_field', an XML format string must be passed as fixed_field_format."
)
self.fixed_field_format = fixed_field_format
if output_style not in [
Table.ALL, Table.PER_YEAR, Table.PER_ATTRIBUTE
]:
raise Exception(
('%s output_style is not appropriate.' % output_style,
'Choose from Table.ALL, Table.PER_YEAR, ',
'and Table.PER_ATTRIBUTE'))
self.output_type = output_type
self.output_style = output_style
if storage_location is None:
storage_location = indicator_directory
elif output_type == 'sql':
server = DatabaseServer(
database_server_configuration=storage_location)
if not server.has_database(
database_name=storage_location.database_name):
server.create_database(
database_name=storage_location.database_name)
storage_location = server.get_database(
database_name=storage_location.database_name)
self.storage_location = storage_location
self.output_storage = StorageFactory().get_storage(
type='%s_storage' % (self.output_type),
storage_location=storage_location)
self.name = name
self.indicator_directory = indicator_directory
def __init__(
self,
indicator_directory,
name=None,
output_type=None,
storage_location=None,
output_style=ALL,
fixed_field_format=None, # Only used with the 'fixed_field' output type
**kwargs):
if output_type == 'sql' and not isinstance(storage_location,
DatabaseConfiguration):
raise Exception(
"If Table output_type is 'sql', a Database object must be passed as storage_location."
)
elif output_type in ['dbf', 'csv', 'tab', 'esri', 'fixed_field', 'xls'] and \
storage_location is not None and \
not isinstance(storage_location,str):
raise Exception(
"If Table output_type is %s, storage_location must be a path to the output directory"
% output_type)
elif output_type not in [
'dbf', 'csv', 'tab', 'sql', 'esri', 'fixed_field', 'xls'
]:
raise Exception(
"Table output_type must be either dbf, csv, tab, sql, esri, fixed_field, xls, not %s"
% output_type)
if output_type == "fixed_field" and not fixed_field_format:
raise ValueError(
"If Table output_type is 'fixed_field', an XML format string must be passed as fixed_field_format."
)
self.fixed_field_format = fixed_field_format
if output_style not in [
Table.ALL, Table.PER_YEAR, Table.PER_ATTRIBUTE
]:
raise Exception(
('%s output_style is not appropriate.' % output_style,
'Choose from Table.ALL, Table.PER_YEAR, ',
'and Table.PER_ATTRIBUTE'))
self.output_type = output_type
self.output_style = output_style
if storage_location is None:
storage_location = indicator_directory
elif output_type == 'sql':
server = DatabaseServer(
database_server_configuration=storage_location)
if not server.has_database(
database_name=storage_location.database_name):
server.create_database(
database_name=storage_location.database_name)
storage_location = server.get_database(
database_name=storage_location.database_name)
elif output_type == 'xls':
storage_location = os.path.join(indicator_directory,
storage_location)
# We want clean output. So remove the file if it exists
if os.path.exists(storage_location):
os.remove(storage_location)
self.storage_location = storage_location
self.output_storage = StorageFactory().get_storage(
type='%s_storage' % (self.output_type),
storage_location=storage_location)
self.name = name
self.indicator_directory = indicator_directory
#checking for new append_col_type argument
if kwargs:
try:
self.append_col_type = kwargs['append_col_type']
except:
self.append_col_type = 'True'
else:
self.append_col_type = False
def run_run(
self, run_resources, run_name=None, scenario_name=None, run_as_multiprocess=True, run_in_background=False
):
"""check run hasn't already been marked running
log it in to run_activity
run simulation
mark run as done/failed
"""
if not self.ready_to_run:
raise "RunManager.setup_new_run must be execute before RunManager.run_run"
if run_resources["cache_directory"] != self.current_cache_directory:
raise "The configuration and the RunManager conflict on the proper cache_directory"
run_resources["run_id"] = self.run_id
if scenario_name is not None:
run_resources["scenario_name"] = scenario_name
self.add_row_to_history(self.run_id, run_resources, "started", run_name=run_name, scenario_name=scenario_name)
try:
# Test pre-conditions
model_system_class_path = run_resources.get("model_system", None)
if model_system_class_path is None:
raise TypeError, (
"The configuration must specify model_system, the" " full Opus path to the model system to be used."
)
# Create baseyear cache
self.create_baseyear_cache(run_resources)
# Create brand-new output database (deletes any prior contents)
if "estimation_database_configuration" in run_resources:
db_server = DatabaseServer(run_resources["estimation_database_configuration"])
if not db_server.has_database(run_resources["estimation_database_configuration"].database_name):
db_server.create_database(run_resources["estimation_database_configuration"].database_name)
# Run simulation
exec("from %s import ModelSystem" % model_system_class_path)
model_system = ModelSystem()
self.model_system = model_system
if "base_year" not in run_resources:
run_resources["base_year"] = run_resources["years"][0] - 1
base_year = run_resources["base_year"]
## create a large enough seed_array so that a restarted run
## can still have seed when running pass the original end_year
## the size needed to store seed_dict of 100 seeds is about 12568 Bytes
self._create_seed_dictionary(run_resources, start_year=base_year, end_year=base_year + 100)
if "run_in_same_process" in run_resources and run_resources["run_in_same_process"]:
model_system.run_in_same_process(run_resources)
elif run_as_multiprocess:
model_system.run_multiprocess(run_resources)
else:
model_system.run_in_one_process(
run_resources, run_in_background=run_in_background, class_path=model_system_class_path
)
self.model_system = None
except:
self.add_row_to_history(
self.run_id, run_resources, "failed", run_name=run_name, scenario_name=scenario_name
)
self.ready_to_run = False
raise # This re-raises the last exception
else:
self.add_row_to_history(self.run_id, run_resources, "done", run_name=run_name, scenario_name=scenario_name)
self.ready_to_run = False
return self.run_id
class AbstractFunctionalTest(object):
protocol = ''
def setUp(self):
self.db_config = TestDatabaseConfiguration(protocol = self.protocol)
self.db_config_node = self.db_config._database_configuration_node()
self.db_server = DatabaseServer(self.db_config)
self.test_db = 'OpusDatabaseTestDatabase'
self.export_from_cache_opus_path = "opus_core.tools.do_export_cache_to_sql"
self.export_to_cache_opus_path = "opus_core.tools.do_export_sql_to_cache"
self.year = 1000
self.temp_dir = tempfile.mkdtemp(prefix='opus_tmp')
self.test_data = {
self.year:{
'table_a':{
'tablea_id':array([1,2,3]),
'tablea_id_name': array(['1','2','3']),
'value1': array([1.0, 2.001, 3], dtype='float'),
'value2': array([True, False, False], dtype='i'), ## sqlit is having problem handling bool type
},
'table_b':{
'tableb_id':array([1,2,3]),
'tableb_id_name': array(['one','two','three']),
'value3': array([1.0, 2.001, 3], dtype='float'),
},
},
}
cache_creator = CreateTestAttributeCache()
cache_creator.create_attribute_cache_with_data(self.temp_dir, self.test_data)
def tearDown(self):
if self.db_server.has_database(self.test_db):
self.db_server.drop_database(self.test_db)
self.db_server.close()
if os.path.exists(self.temp_dir):
rmtree(self.temp_dir)
def test_export_all_tables(self):
logger.log_status("Test export all tables for %s with %s" % (self.protocol, self.__class__))
optional_args = ['-c', os.path.join(self.temp_dir, str(self.year)),
'-d', self.test_db,
'--database_configuration=%s' % self.db_config_node ]
self._call_script(self.export_from_cache_opus_path,
args = optional_args)
self.assertTrue(self.db_server.has_database(database_name = self.test_db))
db = OpusDatabase(database_server_configuration = self.db_config,
database_name = self.test_db)
table_names = self.test_data[self.year].keys()
existing_tables = db.get_tables_in_database()
self.assertEqual( set(existing_tables), set(table_names) )
## export data from db to cache
export_year = str(self.year + 100)
exp_dir = os.path.join(self.temp_dir, export_year)
optional_args = ['-d', self.test_db,
'-c', self.temp_dir,
'-y', export_year,
'--database_configuration=%s' % self.db_config_node ]
self._call_script(self.export_to_cache_opus_path,
args = optional_args)
exported_datasets = [os.path.split(f)[1] for f in glob(exp_dir + '/*')]
self.assertEqual( set(exported_datasets), set(table_names))
org_dir = os.path.join(self.temp_dir, str(self.year))
self._two_caches_are_identical(org_dir, exp_dir)
db.close()
self.db_server.drop_database(self.test_db)
rmtree(exp_dir)
def test_export_one_table(self):
logger.log_status("Test export single table for %s with %s" % (self.protocol, self.__class__))
for table_name in self.test_data[self.year].keys():
self._test_export_one_table(table_name)
def _test_export_one_table(self, table_name):
optional_args = ['-c', os.path.join(self.temp_dir, str(self.year)),
'-d', self.test_db,
'-t', table_name,
'--database_configuration=%s' % self.db_config_node ]
self._call_script(self.export_from_cache_opus_path,
args = optional_args)
self.assertTrue(self.db_server.has_database(database_name = self.test_db))
db = OpusDatabase(database_server_configuration = self.db_config,
database_name = self.test_db)
existing_tables = db.get_tables_in_database()
self.assertEqual( set(existing_tables), set([table_name]) )
export_year = str(self.year + 100)
exp_dir = os.path.join(self.temp_dir, export_year)
optional_args = ['-d', self.test_db,
'-c', self.temp_dir,
'-y', export_year,
'-t', table_name,
'--database_configuration=%s' % self.db_config_node ]
self._call_script(self.export_to_cache_opus_path,
args = optional_args)
exported_datasets = [os.path.split(f)[1] for f in glob(os.path.join(self.temp_dir, export_year) + '/*')]
self.assertEqual( set(exported_datasets), set([table_name]))
org_dir = os.path.join(self.temp_dir, str(self.year))
self._two_caches_are_identical(org_dir, exp_dir, table_names=[table_name])
db.close()
self.db_server.drop_database(self.test_db)
rmtree(exp_dir)
def _call_script(self, opus_path, args):
Popen( " %s %s %s" % (sys.executable, module_path_from_opus_path(opus_path), ' '.join(args)),
shell = True
).communicate()
def _two_caches_are_identical(self, cache_a, cache_b, table_names=None):
""" Check to see if two caches contains identical datasets
even though their data types can be different
"""
if table_names is None:
table_names = os.listdir(cache_a)
for table_name in table_names:
field_names_a = glob(os.path.join(cache_a, table_name) + '/*')
field_names_b = glob(os.path.join(cache_b, table_name) + '/*')
self.assertEqual(len(field_names_a), len(field_names_b))
field_names_a.sort(); field_names_b.sort()
[self.assertTrue(cmp(f_a, f_b)) for f_a, f_b in zip(field_names_a, field_names_b)]
def run(self, config, year, storage_type='sql'):
"""
"""
tm_config = config['travel_model_configuration']
database_server_config = tm_config.get("database_server_configuration", 'simtravel_database_server')
database_name = tm_config.get("database_name", 'mag_zone_baseyear')
cache_directory = config['cache_directory']
simulation_state = SimulationState()
simulation_state.set_cache_directory(cache_directory)
simulation_state.set_current_time(year)
attribute_cache = AttributeCache()
dataset_pool = SessionConfiguration(new_instance=True,
package_order=config['dataset_pool_configuration'].package_order,
in_storage=attribute_cache).get_dataset_pool()
if storage_type == 'sql':
db_server = DatabaseServer(DatabaseConfiguration(
database_name = database_name,
database_configuration = database_server_config
)
)
if not db_server.has_database(database_name):
print "Db doesn't exist creating one"
db_server.create_database(database_name)
db = db_server.get_database(database_name)
output_storage = sql_storage(storage_location = db)
elif storage_type == 'csv':
csv_directory = os.path.join(cache_directory, 'csv', str(year))
output_storage = csv_storage(storage_location=csv_directory)
else:
raise ValueError, "Unsupported output storage type {}".format(storage_type)
logger.start_block('Compute and export data to openAMOS...')
hh = dataset_pool.get_dataset('household')
hh_recs = dataset_pool.get_dataset('households_recs')
#hh_recs.add_attribute(0,"htaz1")
#hh_recs.flush_dataset()
#syn_hh = dataset_pool.get_dataset('synthetic_household')
hh_variables = ['houseid=household.household_id',
"hhsize=household.number_of_agents(person)",
"one=(household.household_id>0).astype('i')",
"inclt35k=(household.income<35000).astype('i')",
"incge35k=(household.income>=35000).astype('i')",
"incge50k=(household.income>=50000).astype('i')",
"incge75k=(household.income>=75000).astype('i')",
"incge100k=(household.income>=100000).astype('i')",
"inc35t50=((household.income>=35000) & (household.income<50000)).astype('i')",
"inc50t75=((household.income>=50000) & (household.income<75000)).astype('i')",
"inc75t100=((household.income>=75000) & (household.income<100000)).astype('i')",
'htaz = ((houseid>0)*(household.disaggregate(building.zone_id)-100) + (houseid<=0)*0)',
#'htaz = ((houseid>0) & (htaz1>100))*(htaz1-100)+((houseid>0) & (htaz1==-1))*1122',
"withchild = (household.aggregate(person.age<18)>0).astype('i')",
"noc = household.aggregate(person.age<18)",
"numadlt = household.aggregate(person.age>=18)",
"hinc=household.income",
"wif=household.workers",
#"wif=household.aggregate(mag_zone.person.is_employed)",
'numwrkr=household.workers',
#'numwrkr=household.aggregate(mag_zone.person.is_employed)',
'nwrkcnt=household.number_of_agents(person) - household.workers',
#'nwrkcnt=household.number_of_agents(person) - household.aggregate(mag_zone.person.is_employed)',
'yrbuilt=mag_zone.household.yrbuilt',
'mag_zone.household.sparent',
'mag_zone.household.rur',
'mag_zone.household.urb',
'zonetid = household.disaggregate(building.zone_id)',
]
self.prepare_attributes(hh, hh_variables)
attrs_to_export = hh_recs.get_known_attribute_names()
self.write_dataset(hh, attrs_to_export, output_storage)
dataset_pool._remove_dataset(hh.dataset_name)
persons = dataset_pool.get_dataset('person')
persons.out_table_name_default = 'persons'
# Recoding invalid work and school locations to some random valid values
persons_recs = dataset_pool.get_dataset('persons_recs')
persons_recs.add_attribute(persons['person_id'],"personuniqueid")
persons_recs.add_attribute(persons['marriage_status'],"marstat")
persons_recs.add_attribute(persons['student_status'],"schstat")
"""
persons_recs.add_attribute(persons['wtaz0'],"htaz_act")
persons_recs.add_attribute(0,"wtaz_rec")
persons_recs.add_attribute(0,"wtaz_rec1")
persons_recs.add_attribute(0,"wtaz_rec2")
persons_recs.add_attribute(0,"wtaz1_1")
persons_recs.add_attribute(0,"wtaz1_2")
persons_recs.add_attribute(0,"wtaz1_3")
#persons_recs.add_attribute(persons['student_status'],"schstat")
"""
persons_recs.add_attribute(0,"wtaz1")
persons_recs.add_attribute(0,"htaz")
persons_recs.add_attribute(0,"schtaz1")
persons_recs.flush_dataset()
#syn_persons = dataset_pool.get_dataset('synthetic_person')
persons_variables = ['personid=mag_zone.person.member_id',
'personuniqueid=person.person_id',
'houseid=person.household_id',
"one=(person.person_id>0).astype('i')",
'trvtime=mag_zone.person.travel_time_from_home_to_work',
'timetowk=mag_zone.person.travel_time_from_home_to_work',
#'mag_zone.person.tmtowrk',
#'tmtowrk=person.disaggregate(synthetic_person.tmtowrk)',
"ag5t10=((person.age>=5) & (person.age<=10)).astype('i')",
"ag11t14=((person.age>=11) & (person.age<=14)).astype('i')",
"ag15t17=((person.age>=15) & (person.age<=17)).astype('i')",
"ag18t24=((person.age>=18) & (person.age<=24)).astype('i')",
"ag25t34=((person.age>=25) & (person.age<=34)).astype('i')",
"ag35t44=((person.age>=35) & (person.age<=44)).astype('i')",
"ag45t54=((person.age>=45) & (person.age<=54)).astype('i')",
"ag55t64=((person.age>=55) & (person.age<=64)).astype('i')",
"agge65=(person.age>=65).astype('i')",
"ag12t17=((person.age>=12) & (person.age<=17)).astype('i')",
"ag5t14=((person.age>=5) & (person.age<=14)).astype('i')",
"agge15=(person.age>=15).astype('i')",
"wrkr=(person.employment_status==1).astype('i')",
"isemploy=(person.employment_status==1).astype('i')",
"fulltim=(mag_zone.person.full_time==1).astype('i')",
'parttim=mag_zone.person.part_time',
'htaz = ((houseid>0)*(person.disaggregate(building.zone_id, intermediates=[household])-100) + (houseid<=0)*0)',
'wtaz1=(person.wtaz <= 0)*0 + (person.wtaz > 0)*(person.wtaz-100)',
"presch = ((person.age < 5)&(houseid>0)).astype('i')",
"mag_zone.person.schstat",
'schtaz1 = (person.schtaz <= 0)*0 + (person.schtaz > 0)*(person.schtaz-100)',
'marstat = person.marriage_status',
'enroll = person.student_status',
'grade = person.student_status & person.education',
'educ = person.education',
"male = (person.sex==1).astype('i')",
"female = (person.sex==2).astype('i')",
"coled = (person.education >= 10).astype('i')",
'race1 = person.race',
"white = (person.race == 1).astype('i')",
'person.hispanic'
]
self.prepare_attributes(persons, persons_variables)
attrs_to_export = persons_recs.get_known_attribute_names()
self.write_dataset(persons, attrs_to_export, output_storage)
dataset_pool._remove_dataset(persons.dataset_name)
zones = dataset_pool.get_dataset('zone')
zones_variables = [
"retail_employment=zone.aggregate(mag_zone.job.sector_group=='retail')",
"public_employment=zone.aggregate(mag_zone.job.sector_group=='public')",
"office_employment=zone.aggregate(mag_zone.job.sector_group=='office')",
"industrial_employment=zone.aggregate(mag_zone.job.sector_group=='individual')",
"other_employment=zone.aggregate(mag_zone.job.sector_group=='other')",
"retail_employment_density=zone.aggregate(mag_zone.job.sector_group=='retail')/zone.acres",
"public_employment_density=zone.aggregate(mag_zone.job.sector_group=='public')/zone.acres",
"office_employment_density=zone.aggregate(mag_zone.job.sector_group=='office')/zone.acres",
"industrial_employment_density=zone.aggregate(mag_zone.job.sector_group=='individual')/zone.acres",
"other_employment_density=zone.aggregate(mag_zone.job.sector_group=='other')/zone.acres",
"total_area=zone.acres",
"lowest_income=zone.aggregate(household.income < scoreatpercentile(household.income, 20))",
"low_income=zone.aggregate(household.income < scoreatpercentile(household.income, 40))",
"high_income=zone.aggregate(household.income > scoreatpercentile(household.income, 80))",
#"institutional_population=zone.disaggregate(locations.institutional_population)",
#"groupquarter_households=zone.disaggregate(locations.groupquarter_households)",
"residential_households=zone.number_of_agents(household)",
"locationid=zone.zone_id",
]
locations = dataset_pool['locations']
self.prepare_attributes(zones, zones_variables, dataset2=locations)
attrs_to_export = locations.get_known_attribute_names()
self.write_dataset(locations, attrs_to_export, output_storage)
dataset_pool._remove_dataset(locations.dataset_name)
#raw_input("check location block")
logger.end_block()
def __init__(self,
indicator_directory,
name = None,
output_type = None,
storage_location = None,
output_style = ALL,
fixed_field_format = None, # Only used with the 'fixed_field' output type
**kwargs
):
if output_type == 'sql' and not isinstance(storage_location, DatabaseConfiguration):
raise Exception("If Table output_type is 'sql', a Database object must be passed as storage_location.")
elif output_type in ['dbf', 'csv', 'tab', 'esri', 'fixed_field', 'xls'] and \
storage_location is not None and \
not isinstance(storage_location,str):
raise Exception("If Table output_type is %s, storage_location must be a path to the output directory"%output_type)
elif output_type not in ['dbf', 'csv', 'tab', 'sql', 'esri', 'fixed_field', 'xls']:
raise Exception("Table output_type must be either dbf, csv, tab, sql, esri, fixed_field, xls, not %s"%output_type)
if output_type == "fixed_field" and not fixed_field_format:
raise ValueError("If Table output_type is 'fixed_field', an XML format string must be passed as fixed_field_format.")
self.fixed_field_format = fixed_field_format
if output_style not in [Table.ALL,
Table.PER_YEAR,
Table.PER_ATTRIBUTE]:
raise Exception(('%s output_style is not appropriate.'%output_style,
'Choose from Table.ALL, Table.PER_YEAR, ',
'and Table.PER_ATTRIBUTE'))
self.output_type = output_type
self.output_style = output_style
if storage_location is None:
storage_location = indicator_directory
elif output_type == 'sql':
server = DatabaseServer(database_server_configuration = storage_location)
if not server.has_database(database_name = storage_location.database_name):
server.create_database(database_name = storage_location.database_name)
storage_location = server.get_database(
database_name = storage_location.database_name)
elif output_type == 'xls':
storage_location = os.path.join(indicator_directory, storage_location)
# We want clean output. So remove the file if it exists
if os.path.exists(storage_location):
os.remove(storage_location)
self.storage_location = storage_location
self.output_storage = StorageFactory().get_storage(
type = '%s_storage'%(self.output_type),
storage_location = storage_location
)
self.name = name
self.indicator_directory = indicator_directory
#checking for new append_col_type argument
if kwargs:
try:
self.append_col_type = kwargs['append_col_type']
except:
self.append_col_type = 'True'
else:
self.append_col_type = False
def test__output_types(self):
output_types = ['csv','tab','fixed_field']
try:
import dbfpy
except ImportError:
pass
else:
output_types.append('dbf')
try:
test_db_name = 'test_db_for_indicator_framework'
database_config = DatabaseConfiguration(
database_name = test_db_name,
test = True,
)
server = DatabaseServer(database_config)
server.drop_database(database_name = test_db_name)
server.create_database(database_name = test_db_name)
except:
has_sql = False
else:
has_sql = True
output_types.append('sql')
indicator = Indicator(
dataset_name = 'test',
attribute = 'opus_core.test.attribute'
)
maker = Maker(project_name = 'test', test = True)
computed_indicators = maker.create_batch(
indicators = {'attr1':indicator},
source_data = self.source_data)
for output_type in output_types:
kwargs = {}
if output_type == 'sql':
kwargs['storage_location'] = database_config
elif output_type == 'fixed_field':
kwargs['fixed_field_format'] = '<fixed_field><field name="attribute_1980" format="10f" /></fixed_field>'
table = Table(
indicator_directory = self.source_data.get_indicator_directory(),
output_type = output_type,
**kwargs)
table._create_input_stores(self.source_data.years)
viz_result = table.visualize(
indicators_to_visualize = ['attr1'],
computed_indicators = computed_indicators)[0]
if output_type in ['csv','dbf','tab','fixed_field']:
self.assertTrue(os.path.exists(
os.path.join(viz_result.storage_location,
viz_result.table_name + '.' + viz_result.file_extension)))
elif output_type == 'sql':
self.assertTrue(server.has_database(test_db_name))
db = server.get_database(test_db_name)
self.assertTrue(db.table_exists(table_name = viz_result.table_name))
if has_sql:
server.drop_database(database_name = test_db_name)
