Пример #1
0
def test_orcid_login_callback_researcher_flow(patch, patch2, request_ctx):
    """Test login from orcid callback function for researcher and display profile."""
    org = Organisation.create(name="THE ORGANISATION",
                              tuakiri_name="THE ORGANISATION",
                              confirmed=True,
                              orcid_client_id="CLIENT ID",
                              orcid_secret="Client Secret",
                              city="CITY",
                              country="COUNTRY",
                              disambiguated_id="ID",
                              disambiguation_source="SOURCE",
                              is_email_sent=True)
    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    roles=Role.RESEARCHER,
                    orcid="123",
                    confirmed=True,
                    organisation=org)
    UserOrg.create(user=u, org=org, is_admin=False)
    token = utils.generate_confirmation_token(email=u.email, org=org.name)
    UserInvitation.create(email=u.email,
                          token=token,
                          affiliations=Affiliation.EMP)
    OrcidToken.create(user=u,
                      org=org,
                      scope='/read-limited,/activities/update')
    with request_ctx():
        request.args = {"invitation_token": token, "state": "xyz"}
        session['oauth_state'] = "xyz"
        resp = authcontroller.orcid_login_callback(request)
        assert resp.status_code == 302
        # display profile
        assert resp.location.startswith("/profile")
Пример #2
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def test_process_other_id_records(app, mocker):
    """Test create or update researcher other id."""
    mocker.patch("orcid_hub.utils.send_email", send_mail_mock)
    mocker.patch(
        "orcid_api_v3.api.DevelopmentMemberAPIV30Api.create_external_identifierv3",
        create_or_update_fund_mock)
    mocker.patch("orcid_hub.orcid_client.MemberAPIV3.get_record",
                 return_value=get_profile())
    org = app.data["org"]
    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    roles=Role.RESEARCHER,
                    orcid="12344",
                    confirmed=True,
                    organisation=org)

    UserOrg.create(user=u, org=org)

    t = Task.create(org=org,
                    filename="xyz.json",
                    created_by=u,
                    updated_by=u,
                    task_type=TaskType.OTHER_ID)

    OtherIdRecord.create(task=t,
                         type="grant_number",
                         value="xyz",
                         url="https://xyz.com",
                         relationship="SELF",
                         is_active=True,
                         status="email sent",
                         first_name="Test",
                         last_name="Test",
                         email="*****@*****.**",
                         visibility="PUBLIC",
                         display_index=1)

    UserInvitation.create(invitee=u,
                          inviter=u,
                          org=org,
                          task=t,
                          email="*****@*****.**",
                          token="xyztoken")

    OrcidToken.create(user=u,
                      org=org,
                      scopes="/read-limited,/person/update",
                      access_token="Test_token")
    utils.process_other_id_records()
    record = OtherIdRecord.get(email="*****@*****.**")
    assert 12399 == record.put_code
    assert "12344" == record.orcid
Пример #3
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def test_new_invitation_token(app):
    """Test if the tokens are realy unique."""
    random.seed(42)
    token0 = ''.join(
        random.choice(string.ascii_letters + string.digits) for _ in range(5))
    random.seed(42)
    token = utils.new_invitation_token()
    assert token == token0
    org, user, admin = [app.data[n] for n in ["org", "user", "admin"]]

    UserInvitation.create(org=org, invitee=user, inviter=admin, token=token)
    random.seed(42)
    token2 = utils.new_invitation_token()
    assert token2 != token
Пример #4
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def test_orcid_login(client):
    """Test login from orcid."""
    org = Organisation.get(name="THE ORGANISATION")
    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    roles=Role.TECHNICAL,
                    orcid="123",
                    confirmed=True,
                    organisation=org)
    user_org = UserOrg.create(user=u, org=org, is_admin=True)

    resp = client.get("/orcid/login/NOT-EXISTTING", follow_redirects=True)
    assert resp.status_code == 200
    assert b"Failed to login via ORCID using token NOT-EXISTTING" in resp.data

    token = "TOKEN-1234567"
    ui = UserInvitation.create(org=org, invitee=u, email=u.email, token=token)
    resp = client.get(f"/orcid/login/{token}")
    assert resp.status_code == 200
    orcid_authorize = OrcidAuthorizeCall.get(method="GET")
    assert "&email=test123_test_orcid_login%40test.test.net" in orcid_authorize.url
    ui.created_at -= timedelta(days=100)
    ui.save()
    resp = client.get(f"/orcid/login/{token}")
    assert resp.status_code == 302
    url = urlparse(resp.location)
    assert url.path == '/'
    # Testing the expired token flow for researcher
    user_org.is_admin = False
    user_org.save()
    resp = client.get(f"/orcid/login/{token}")
    assert resp.status_code == 302
    url = urlparse(resp.location)
    assert url.path == '/'
Пример #5
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def test_test_database(models):
    """Test of the consitency of the test database."""
    assert Organisation.select().count() == 10
    assert User.select().count() == 63
    assert OrcidToken.select().count() == 60
    assert AffiliationRecord.select().count() == 10
    assert FundingRecord.select().count() == 10
    assert FundingContributor.select().count() == 10
    assert FundingInvitee.select().count() == 10
    assert ExternalId.select().count() == 10
    assert WorkRecord.select().count() == 10
    assert WorkContributor.select().count() == 10
    assert WorkExternalId.select().count() == 10
    assert WorkInvitee.select().count() == 10
    assert PeerReviewRecord.select().count() == 10
    assert PeerReviewExternalId.select().count() == 10
    assert PeerReviewInvitee.select().count() == 10
    assert ResearcherUrlRecord.select().count() == 10
    assert OtherNameRecord.select().count() == 10
    assert KeywordRecord.select().count() == 10
    assert Task.select().count() == 30
    assert UserOrgAffiliation.select().count() == 30

    assert User.get(id=43).admin_for.count() == 10
    assert User.get(id=1).admin_for.count() == 0
    assert User.get(id=42).admin_for.count() > 0
    assert User.get(id=2).organisations.count() > 0
    assert Organisation.get(id=1).admins.count() == 1
    assert Organisation.get(id=5).users.count() > 0
    assert Organisation.get(id=5).admins.count() > 0
    assert User.select().where(User.orcid == User.get(
        email="*****@*****.**").orcid).count() == 3
    assert len(User.get(email="*****@*****.**").org_links) == 3

    user = User.get(email="*****@*****.**")
    available_organisations = user.available_organisations
    assert available_organisations.count() == 10

    admin = User.create(email="*****@*****.**", organisation=user.organisation, confirmed=True,
            first_name="TEST", last_name="ADMIN", roles=Role.ADMIN)
    ui = UserInvitation.create(email=user.email, invitee=user, inviter=admin, token="TOKEN-123")
    admin.delete_instance()
    ui = UserInvitation.get(ui.id)
    assert ui.inviter_id is None
    user.delete_instance()
    assert not UserInvitation.select().where(UserInvitation.id == ui.id).exists()

    org = Organisation.select().limit(1).first()
    user = User.select().limit(1).first()
    ot = OrcidToken.create(user=user, org=org, scope="S1,S2,S3")
    assert len(ot.scopes) == 3

    ot.scopes = ["A", "B", "C", "D"]
    assert ot.scope == "A,B,C,D"
Пример #6
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def test_create_or_update_affiliation(patch, test_db, request_ctx):
    """Test create or update affiliation."""
    org = Organisation.create(name="THE ORGANISATION",
                              tuakiri_name="THE ORGANISATION",
                              confirmed=True,
                              orcid_client_id="APP-5ZVH4JRQ0C27RVH5",
                              orcid_secret="Client Secret",
                              city="CITY",
                              country="COUNTRY",
                              disambiguation_org_id="ID",
                              disambiguation_org_source="SOURCE")
    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    username="******",
                    roles=Role.RESEARCHER,
                    orcid="123",
                    confirmed=True,
                    organisation=org)
    UserOrg.create(user=u, org=org)

    t = Task.create(org=org,
                    filename="xyz.json",
                    created_by=u,
                    updated_by=u,
                    task_type=0)

    AffiliationRecord.create(is_active=True,
                             task=t,
                             external_id="Test",
                             first_name="Test",
                             last_name="Test",
                             email="*****@*****.**",
                             orcid="123112311231",
                             organisation="asdasd",
                             affiliation_type="staff",
                             role="Test",
                             department="Test",
                             city="Test",
                             state="Test",
                             country="Test",
                             disambiguated_id="Test",
                             disambiguation_source="Test")

    UserInvitation.create(invitee=u,
                          inviter=u,
                          org=org,
                          task=t,
                          email="*****@*****.**",
                          token="xyztoken")

    OrcidToken.create(user=u,
                      org=org,
                      scope="/read-limited,/activities/update",
                      access_token="Test_token")

    tasks = (Task.select(
        Task, AffiliationRecord, User,
        UserInvitation.id.alias("invitation_id"), OrcidToken
    ).where(
        AffiliationRecord.processed_at.is_null(), AffiliationRecord.is_active,
        ((User.id.is_null(False)
          & User.orcid.is_null(False) & OrcidToken.id.is_null(False)) |
         ((User.id.is_null() | User.orcid.is_null() | OrcidToken.id.is_null())
          & UserInvitation.id.is_null() &
          (AffiliationRecord.status.is_null()
           | AffiliationRecord.status.contains("sent").__invert__())))).join(
               AffiliationRecord,
               on=(Task.id == AffiliationRecord.task_id)).join(
                   User,
                   JOIN.LEFT_OUTER,
                   on=((User.email == AffiliationRecord.email) |
                       (User.orcid == AffiliationRecord.orcid))).join(
                           Organisation,
                           JOIN.LEFT_OUTER,
                           on=(Organisation.id == Task.org_id)).
             join(UserInvitation,
                  JOIN.LEFT_OUTER,
                  on=((UserInvitation.email == AffiliationRecord.email) &
                      (UserInvitation.task_id == Task.id))).join(
                          OrcidToken,
                          JOIN.LEFT_OUTER,
                          on=((OrcidToken.user_id == User.id) &
                              (OrcidToken.org_id == Organisation.id) &
                              (OrcidToken.scope.contains("/activities/update"))
                              )).limit(20))
    for (task_id, org_id, user), tasks_by_user in groupby(
            tasks, lambda t: (
                t.id,
                t.org_id,
                t.affiliation_record.user,
            )):
        utils.create_or_update_affiliations(user=user,
                                            org_id=org_id,
                                            records=tasks_by_user)
    affiliation_record = AffiliationRecord.get(task=t)
    assert 12399 == affiliation_record.put_code
    assert "12344" == affiliation_record.orcid
    assert "Employment record was updated" in affiliation_record.status
Пример #7
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def test_create_or_update_peer_review(email_patch, patch, test_db,
                                      request_ctx):
    """Test create or update peer review."""
    org = Organisation.create(name="THE ORGANISATION",
                              tuakiri_name="THE ORGANISATION",
                              confirmed=True,
                              orcid_client_id="APP-5ZVH4JRQ0C27RVH5",
                              orcid_secret="Client Secret",
                              city="CITY",
                              country="COUNTRY",
                              disambiguation_org_id="ID",
                              disambiguation_org_source="SOURCE")

    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    username="******",
                    roles=Role.RESEARCHER,
                    orcid="12344",
                    confirmed=True,
                    organisation=org)

    UserOrg.create(user=u, org=org)

    t = Task.create(id=12,
                    org=org,
                    filename="xyz.json",
                    created_by=u,
                    updated_by=u,
                    task_type=3)
    pr = PeerReviewRecord.create(task=t,
                                 review_group_id="issn:12131",
                                 reviewer_role="reviewer",
                                 review_url="xyz",
                                 review_type="REVIEW",
                                 subject_external_id_type="doi",
                                 subject_external_id_value="1212",
                                 subject_external_id_url="url/SELF",
                                 subject_external_id_relationship="SELF",
                                 subject_container_name="Journal title",
                                 subject_type="JOURNAL_ARTICLE",
                                 subject_name_title="name",
                                 subject_name_subtitle="subtitle",
                                 subject_name_translated_title_lang_code="en",
                                 subject_name_translated_title="sdsd",
                                 subject_url="url",
                                 convening_org_name="THE ORGANISATION",
                                 convening_org_city="auckland",
                                 convening_org_region="auckland",
                                 convening_org_country="nz",
                                 convening_org_disambiguated_identifier="123",
                                 convening_org_disambiguation_source="1212",
                                 is_active=True)

    PeerReviewInvitee.create(peer_review_record=pr,
                             first_name="Test",
                             email="*****@*****.**",
                             orcid="12344",
                             visibility="PUBLIC")

    PeerReviewExternalId.create(peer_review_record=pr,
                                type="Test_type",
                                value="122334_different",
                                url="Test",
                                relationship="SELF")

    UserInvitation.create(invitee=u,
                          inviter=u,
                          org=org,
                          task=t,
                          email="*****@*****.**",
                          token="xyztoken")

    OrcidToken.create(user=u,
                      org=org,
                      scope="/read-limited,/activities/update",
                      access_token="Test_token")

    utils.process_peer_review_records()
    peer_review_invitees = PeerReviewInvitee.get(orcid=12344)
    assert 12399 == peer_review_invitees.put_code
    assert "12344" == peer_review_invitees.orcid
Пример #8
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def test_create_or_update_work(email_patch, patch, test_db, request_ctx):
    """Test create or update work."""
    org = Organisation.create(name="THE ORGANISATION",
                              tuakiri_name="THE ORGANISATION",
                              confirmed=True,
                              orcid_client_id="APP-5ZVH4JRQ0C27RVH5",
                              orcid_secret="Client Secret",
                              city="CITY",
                              country="COUNTRY",
                              disambiguation_org_id="ID",
                              disambiguation_org_source="SOURCE")

    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    username="******",
                    roles=Role.RESEARCHER,
                    orcid="12344",
                    confirmed=True,
                    organisation=org)

    UserOrg.create(user=u, org=org)

    t = Task.create(org=org,
                    filename="xyz.json",
                    created_by=u,
                    updated_by=u,
                    task_type=2)

    wr = WorkRecord.create(task=t,
                           title="Test titile",
                           sub_title="Test titile",
                           translated_title="Test title",
                           translated_title_language_code="Test",
                           journal_title="Test titile",
                           short_description="Test desc",
                           citation_type="Test",
                           citation_value="Test",
                           type="BOOK_CHAPTER",
                           url="Test org",
                           language_code="en",
                           country="Test",
                           org_name="Test_orgname",
                           city="Test city",
                           region="Test",
                           is_active=True)

    WorkInvitees.create(work_record=wr,
                        first_name="Test",
                        email="*****@*****.**",
                        orcid="12344",
                        visibility="PUBLIC")

    WorkExternalId.create(work_record=wr,
                          type="Test_type",
                          value="Test_value",
                          url="Test",
                          relationship="SELF")

    WorkContributor.create(work_record=wr,
                           contributor_sequence="1",
                           orcid="1213",
                           role="LEAD",
                           name="xyz",
                           email="*****@*****.**")

    UserInvitation.create(invitee=u,
                          inviter=u,
                          org=org,
                          task=t,
                          email="*****@*****.**",
                          token="xyztoken")

    OrcidToken.create(user=u,
                      org=org,
                      scope="/read-limited,/activities/update",
                      access_token="Test_token")

    utils.process_work_records()
    work_invitees = WorkInvitees.get(orcid=12344)
    assert 12399 == work_invitees.put_code
    assert "12344" == work_invitees.orcid
Пример #9
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def test_create_or_update_funding(email_patch, patch, test_db, request_ctx):
    """Test create or update funding."""
    org = Organisation.create(name="THE ORGANISATION",
                              tuakiri_name="THE ORGANISATION",
                              confirmed=True,
                              orcid_client_id="APP-5ZVH4JRQ0C27RVH5",
                              orcid_secret="Client Secret",
                              city="CITY",
                              country="COUNTRY",
                              disambiguation_org_id="ID",
                              disambiguation_org_source="SOURCE")

    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    username="******",
                    roles=Role.RESEARCHER,
                    orcid="123",
                    confirmed=True,
                    organisation=org)

    UserOrg.create(user=u, org=org)

    t = Task.create(org=org,
                    filename="xyz.json",
                    created_by=u,
                    updated_by=u,
                    task_type=1)

    fr = FundingRecord.create(task=t,
                              title="Test titile",
                              translated_title="Test title",
                              translated_title_language_code="Test",
                              type="GRANT",
                              organization_defined_type="Test org",
                              short_description="Test desc",
                              amount="1000",
                              currency="USD",
                              org_name="Test_orgname",
                              city="Test city",
                              region="Test",
                              country="Test",
                              disambiguated_org_identifier="Test_dis",
                              disambiguation_source="Test_source",
                              is_active=True)

    FundingInvitees.create(funding_record=fr,
                           first_name="Test",
                           email="*****@*****.**",
                           visibility="PUBLIC",
                           orcid="123")

    ExternalId.create(funding_record=fr,
                      type="Test_type",
                      value="Test_value",
                      url="Test",
                      relationship="SELF")

    FundingContributor.create(funding_record=fr,
                              orcid="1213",
                              role="LEAD",
                              name="Contributor",
                              email="*****@*****.**")

    UserInvitation.create(invitee=u,
                          inviter=u,
                          org=org,
                          task=t,
                          email="*****@*****.**",
                          token="xyztoken")

    OrcidToken.create(user=u,
                      org=org,
                      scope="/read-limited,/activities/update",
                      access_token="Test_token")

    utils.process_funding_records()
    funding_invitees = FundingInvitees.get(orcid=12344)
    assert 12399 == funding_invitees.put_code
    assert "12344" == funding_invitees.orcid
Пример #10
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def test_orcid_login_callback_researcher_flow(client, mocker):
    """Test login from orcid callback function for researcher and display profile."""
    fetch_token = mocker.patch("orcid_hub.OAuth2Session.fetch_token",
                               side_effect=fetch_token_mock)
    mocker.patch(
        "orcid_hub.orcid_client.MemberAPI.create_or_update_affiliation",
        side_effect=affiliation_mock)
    org = Organisation.create(
        name="THE ORGANISATION:test_orcid_login_callback_researcher_flow",
        tuakiri_name=
        "THE ORGANISATION:test_orcid_login_callback_researcher_flow",
        confirmed=True,
        orcid_client_id="CLIENT ID",
        orcid_secret="Client Secret",
        city="CITY",
        country="COUNTRY",
        disambiguated_id="ID",
        disambiguation_source="RINGGOLD",
        is_email_sent=True)
    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    roles=Role.RESEARCHER,
                    orcid="123",
                    confirmed=True,
                    organisation=org)
    UserOrg.create(user=u, org=org, is_admin=False)
    token = utils.new_invitation_token()
    UserInvitation.create(email=u.email,
                          token=token,
                          affiliations=Affiliation.EMP,
                          org=org,
                          invitee=u)

    resp = client.get(f"/orcid/login/{token}")
    assert resp.status_code == 200
    assert token.encode() in resp.data

    state = session['oauth_state']

    resp = client.get(f"/auth/?state={state}&login=1")
    assert resp.status_code == 302
    assert resp.location.endswith("/link")
    fetch_token.assert_called_once()

    resp = client.get(f"/auth/?invitation_token={token}&login=1")
    assert resp.status_code == 302
    assert urlparse(resp.location).path == "/"
    fetch_token.assert_called_once()

    resp = client.get(f"/auth/?invitation_token={token}&login=1",
                      follow_redirects=True)
    assert b"Danger" in resp.data
    assert b"Something went wrong, Please retry giving permissions " in resp.data

    fetch_token.reset_mock()
    resp = client.get(f"/auth/?invitation_token={token}&state={state}",
                      follow_redirects=True)
    assert b"Warning" in resp.data
    assert b"The ORCID Hub was not able to automatically write an affiliation" in resp.data

    OrcidToken.delete().where(OrcidToken.user == u,
                              OrcidToken.org == org).execute()
    fetch_token.reset_mock()
    resp = client.get(f"/auth/?invitation_token={token}&state={state}&login=1")
    assert resp.status_code == 302
    assert resp.location.endswith("/profile")
    fetch_token.assert_called_once()
    assert OrcidToken.select().where(OrcidToken.user == u).count() == 1

    resp = client.get(f"/orcid/login/{token}", follow_redirects=True)
    assert b"You have already given permission" in resp.data
Пример #11
0
def test_create_or_update_affiliation(app, mocker):
    """Test create or update affiliation."""
    mocker.patch(
        "orcid_api_v3.api.DevelopmentMemberAPIV30Api.update_employmentv3",
        return_value=Mock(status=201, headers={'Location': '12344/XYZ/12399'}))
    mocker.patch(
        "orcid_api_v3.api.DevelopmentMemberAPIV30Api.create_employmentv3",
        return_value=Mock(status=201, headers={'Location': '12344/XYZ/12399'}))
    send_email = mocker.patch("orcid_hub.utils.send_email")
    capture_event = mocker.patch(
        "sentry_sdk.transport.HttpTransport.capture_event")
    org = app.data["org"]
    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    roles=Role.RESEARCHER,
                    orcid="123",
                    confirmed=True,
                    organisation=org)
    UserOrg.create(user=u, org=org)
    t = Task.create(org=org,
                    filename="xyz.json",
                    created_by=u,
                    updated_by=u,
                    task_type=TaskType.AFFILIATION)
    OrcidToken.create(user=u,
                      org=org,
                      scopes="/read-limited,/activities/update",
                      access_token="Test_token")
    UserInvitation.create(invitee=u,
                          inviter=u,
                          org=org,
                          task=t,
                          email="*****@*****.**",
                          token="xyztoken")

    u = User.create(email="*****@*****.**",
                    name="TEST USER 2",
                    roles=Role.RESEARCHER,
                    confirmed=True,
                    organisation=org)
    UserOrg.create(user=u, org=org)

    AffiliationRecord.create(is_active=True,
                             task=t,
                             local_id="Test",
                             first_name="Test",
                             last_name="Test",
                             email="*****@*****.**",
                             orcid="123112311231",
                             organisation="asdasd",
                             affiliation_type="staff",
                             role="Test",
                             department="Test",
                             city="Test",
                             state="Test",
                             country="NZ",
                             disambiguated_id="Test",
                             disambiguation_source="Test")
    AffiliationRecord.create(is_active=True,
                             task=t,
                             local_id="Test",
                             first_name="Test",
                             last_name="Test",
                             email="*****@*****.**",
                             orcid="123112311231",
                             organisation=org.name,
                             affiliation_type="staff",
                             role="Test",
                             department="Test",
                             city="Test",
                             state="Test",
                             country="NZ")
    AffiliationRecord.create(is_active=True,
                             task=t,
                             local_id="Test",
                             first_name="Test",
                             last_name="Test",
                             email="*****@*****.**",
                             orcid="123112311231",
                             organisation="ANOTHER ORG",
                             affiliation_type="staff",
                             role="Test",
                             department="Test",
                             city="Test",
                             state="Test",
                             country="NZ",
                             visibility="PUBLIC")
    AffiliationRecord.create(is_active=True,
                             task=t,
                             local_id="Test#2",
                             first_name="Test2",
                             last_name="Test2",
                             email="*****@*****.**",
                             organisation=org.name,
                             affiliation_type="staff")

    tasks = (Task.select(
        Task, AffiliationRecord, User,
        UserInvitation.id.alias("invitation_id"), OrcidToken).join(
            AffiliationRecord,
            on=(Task.id == AffiliationRecord.task_id).alias("record")).join(
                User,
                JOIN.LEFT_OUTER,
                on=((User.email == AffiliationRecord.email)
                    | (User.orcid == AffiliationRecord.orcid))).join(
                        Organisation,
                        JOIN.LEFT_OUTER,
                        on=(Organisation.id == Task.org_id)).join(
                            UserInvitation,
                            JOIN.LEFT_OUTER,
                            on=((UserInvitation.email
                                 == AffiliationRecord.email)
                                & (UserInvitation.task_id == Task.id))).
             join(OrcidToken,
                  JOIN.LEFT_OUTER,
                  on=((OrcidToken.user_id == User.id)
                      & (OrcidToken.org_id == Organisation.id)
                      & (OrcidToken.scopes.contains("/activities/update")))))
    app.config["SERVER_NAME"] = "orcidhub"
    for (task_id, org_id, user), tasks_by_user in groupby(
            tasks, lambda t: (
                t.id,
                t.org_id,
                t.record.user,
            )):
        with patch("orcid_hub.orcid_client.MemberAPIV3.get_record",
                   return_value=get_profile()
                   if user.orcid else None) as get_record:
            utils.create_or_update_affiliations(user=user,
                                                org_id=org_id,
                                                records=tasks_by_user)
            get_record.assert_any_call()
    affiliation_record = AffiliationRecord.select().order_by(
        AffiliationRecord.id).limit(1).first()
    assert 12399 == affiliation_record.put_code
    assert "12344" == affiliation_record.orcid
    assert ("Employment record was updated" in affiliation_record.status
            or "Employment record was created" in affiliation_record.status)
    capture_event.assert_called()
    send_email.assert_called_once()
Пример #12
0
def test_create_or_update_property_record(app, mocker):
    """Test create or update researcher keyword, researcher url, other name and country"""
    mocker.patch("orcid_hub.utils.send_email", send_mail_mock)
    mocker.patch(
        "orcid_api_v3.api.DevelopmentMemberAPIV30Api.create_keywordv3",
        create_or_update_fund_mock)
    mocker.patch(
        "orcid_api_v3.api.DevelopmentMemberAPIV30Api.create_researcher_urlv3",
        create_or_update_fund_mock)
    mocker.patch(
        "orcid_api_v3.api.DevelopmentMemberAPIV30Api.create_other_namev3",
        create_or_update_fund_mock)
    mocker.patch(
        "orcid_api_v3.api.DevelopmentMemberAPIV30Api.create_addressv3",
        create_or_update_fund_mock)
    mocker.patch("orcid_hub.orcid_client.MemberAPIV3.get_record",
                 return_value=get_profile())
    org = app.data["org"]
    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    roles=Role.RESEARCHER,
                    orcid="12344",
                    confirmed=True,
                    organisation=org)

    UserOrg.create(user=u, org=org)
    OrcidToken.create(user=u,
                      org=org,
                      scopes="/read-limited,/person/update",
                      access_token="Test_token")

    t = Task.create(id=12,
                    org=org,
                    filename="xyz.json",
                    created_by=u,
                    updated_by=u,
                    task_type=TaskType.PROPERTY)

    PropertyRecord.create(task=t,
                          type="KEYWORD",
                          is_active=True,
                          status="email sent",
                          first_name="Test",
                          last_name="Test",
                          email="*****@*****.**",
                          visibility="PUBLIC",
                          value="dummy name",
                          display_index=1)

    PropertyRecord.create(task=t,
                          type="COUNTRY",
                          is_active=True,
                          status="email sent",
                          first_name="Test",
                          last_name="Test",
                          email="*****@*****.**",
                          visibility="PUBLIC",
                          value="IN",
                          display_index=1)

    PropertyRecord.create(task=t,
                          type="URL",
                          is_active=True,
                          status="email sent",
                          first_name="Test",
                          last_name="Test",
                          email="*****@*****.**",
                          visibility="PUBLIC",
                          name="url name",
                          value="https://www.xyz.com",
                          display_index=1)

    PropertyRecord.create(task=t,
                          type="NAME",
                          is_active=True,
                          status="email sent",
                          first_name="Test",
                          last_name="Test",
                          email="*****@*****.**",
                          visibility="PUBLIC",
                          value="dummy name",
                          display_index=1)

    UserInvitation.create(invitee=u,
                          inviter=u,
                          org=org,
                          task=t,
                          email="*****@*****.**",
                          token="xyztoken")

    utils.process_property_records()
    keyword_record = PropertyRecord.get(email="*****@*****.**",
                                        type="KEYWORD")
    assert 12399 == keyword_record.put_code
    assert "12344" == keyword_record.orcid
    address_record = PropertyRecord.get(email="*****@*****.**",
                                        type="COUNTRY")
    assert 12399 == address_record.put_code
    assert "12344" == address_record.orcid
    url_record = PropertyRecord.get(email="*****@*****.**",
                                    type="URL")
    assert 12399 == url_record.put_code
    assert "12344" == url_record.orcid
    other_name_record = PropertyRecord.get(email="*****@*****.**",
                                           type="NAME")
    assert 12399 == other_name_record.put_code
    assert "12344" == other_name_record.orcid
Пример #13
0
def test_create_or_update_peer_review(app, mocker):
    """Test create or update peer review."""
    mocker.patch("orcid_hub.utils.send_email", send_mail_mock)
    mocker.patch(
        "orcid_api_v3.api.DevelopmentMemberAPIV30Api.create_peer_reviewv3",
        create_or_update_fund_mock)
    org = app.data["org"]
    mocker.patch("orcid_hub.orcid_client.MemberAPIV3.get_record",
                 return_value=get_profile(org=org))
    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    roles=Role.RESEARCHER,
                    orcid="12344",
                    confirmed=True,
                    organisation=org)

    UserOrg.create(user=u, org=org)

    t = Task.create(id=12,
                    org=org,
                    filename="xyz.json",
                    created_by=u,
                    updated_by=u,
                    task_type=TaskType.PEER_REVIEW)
    pr = PeerReviewRecord.create(
        task=t,
        review_group_id="issn:12131",
        reviewer_role="reviewer",
        review_url="xyz",
        review_type="REVIEW",
        subject_external_id_type="doi",
        subject_external_id_value="1212",
        subject_external_id_url="url/SELF",
        subject_external_id_relationship="SELF",
        subject_container_name="Journal title",
        subject_type="JOURNAL_ARTICLE",
        subject_name_title="name",
        subject_name_subtitle="subtitle",
        review_completion_date=PartialDate.create("2003-07-14"),
        subject_name_translated_title_lang_code="en",
        subject_name_translated_title="sdsd",
        subject_url="url",
        convening_org_name="THE ORGANISATION",
        convening_org_city="auckland",
        convening_org_region="auckland",
        convening_org_country="NZ",
        convening_org_disambiguated_identifier="123",
        convening_org_disambiguation_source="1212",
        is_active=True)

    PeerReviewInvitee.create(record=pr,
                             first_name="Test",
                             email="*****@*****.**",
                             orcid="12344",
                             visibility="PUBLIC")

    PeerReviewExternalId.create(record=pr,
                                type="Test_type",
                                value="122334_different",
                                url="Test",
                                relationship="SELF")

    UserInvitation.create(invitee=u,
                          inviter=u,
                          org=org,
                          task=t,
                          email="*****@*****.**",
                          token="xyztoken")

    OrcidToken.create(user=u,
                      org=org,
                      scopes="/read-limited,/activities/update",
                      access_token="Test_token")

    utils.process_peer_review_records()
    peer_review_invitees = PeerReviewInvitee.get(orcid=12344)
    assert 12399 == peer_review_invitees.put_code
    assert "12344" == peer_review_invitees.orcid
Пример #14
0
def test_create_or_update_work(app, mocker):
    """Test create or update work."""
    mocker.patch("orcid_hub.utils.send_email", send_mail_mock)
    mocker.patch("orcid_api_v3.api.DevelopmentMemberAPIV30Api.create_workv3",
                 create_or_update_fund_mock)
    org = app.data["org"]
    mocker.patch("orcid_hub.orcid_client.MemberAPIV3.get_record",
                 return_value=get_profile(org=org))

    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    roles=Role.RESEARCHER,
                    orcid="12344",
                    confirmed=True,
                    organisation=org)

    UserOrg.create(user=u, org=org)

    t = Task.create(org=org,
                    filename="xyz.json",
                    created_by=u,
                    updated_by=u,
                    task_type=TaskType.WORK)

    wr = WorkRecord.create(task=t,
                           title="Test titile",
                           subtitle="Test titile",
                           translated_title="Test title",
                           translated_title_language_code="hi",
                           journal_title="Test titile",
                           short_description="Test desc",
                           citation_type="bibtex",
                           citation_value="Test",
                           type="BOOK_CHAPTER",
                           publication_date=PartialDate.create("2003-07-14"),
                           url="Test org",
                           language_code="en",
                           country="NZ",
                           org_name="Test_orgname",
                           city="Test city",
                           region="Test",
                           is_active=True)

    WorkInvitee.create(record=wr,
                       first_name="Test",
                       email="*****@*****.**",
                       orcid="12344",
                       visibility="PUBLIC")

    WorkExternalId.create(record=wr,
                          type="Test_type",
                          value="Test_value",
                          url="Test",
                          relationship="SELF")

    WorkContributor.create(record=wr,
                           contributor_sequence="first",
                           orcid="1213",
                           role="author",
                           name="xyz",
                           email="*****@*****.**")

    UserInvitation.create(invitee=u,
                          inviter=u,
                          org=org,
                          task=t,
                          email="*****@*****.**",
                          token="xyztoken")

    OrcidToken.create(user=u,
                      org=org,
                      scopes="/read-limited,/activities/update",
                      access_token="Test_token")

    utils.process_work_records()
    invitee = WorkInvitee.get(orcid="12344")
    assert 12399 == invitee.put_code
    assert "12344" == invitee.orcid
Пример #15
0
def test_create_or_update_funding(app, mocker):
    """Test create or update funding."""
    mocker.patch("orcid_hub.utils.send_email", send_mail_mock)
    mocker.patch(
        "orcid_api_v3.api.DevelopmentMemberAPIV30Api.create_fundingv3",
        create_or_update_fund_mock)
    org = app.data["org"]
    mocker.patch("orcid_hub.orcid_client.MemberAPIV3.get_record",
                 return_value=get_profile(org=org))

    u = User.create(email="*****@*****.**",
                    name="TEST USER",
                    roles=Role.RESEARCHER,
                    orcid="123",
                    confirmed=True,
                    organisation=org)

    UserOrg.create(user=u, org=org)

    t = Task.create(org=org,
                    filename="xyz.json",
                    created_by=u,
                    updated_by=u,
                    task_type=TaskType.FUNDING)

    fr = FundingRecord.create(task=t,
                              title="Test titile",
                              translated_title="Test title",
                              translated_title_language_code="hi",
                              type="GRANT",
                              organization_defined_type="Test org",
                              short_description="Test desc",
                              amount="1000",
                              currency="USD",
                              org_name="Test_orgname",
                              city="Test city",
                              region="Test",
                              url="url",
                              start_date=PartialDate.create("2003-07-14"),
                              end_date=PartialDate.create("2004-07-14"),
                              country="NZ",
                              disambiguated_id="Test_dis",
                              disambiguation_source="Test_source",
                              is_active=True)

    FundingInvitee.create(record=fr,
                          first_name="Test",
                          email="*****@*****.**",
                          visibility="PUBLIC",
                          orcid="123")

    ExternalId.create(record=fr,
                      type="Test_type",
                      value="Test_value",
                      url="Test",
                      relationship="SELF")

    FundingContributor.create(record=fr,
                              orcid="1213",
                              role="LEAD",
                              name="Contributor",
                              email="*****@*****.**")

    UserInvitation.create(invitee=u,
                          inviter=u,
                          org=org,
                          task=t,
                          email="*****@*****.**",
                          token="xyztoken")

    OrcidToken.create(user=u,
                      org=org,
                      scopes="/read-limited,/activities/update",
                      access_token="Test_token")

    utils.process_funding_records()
    funding_invitees = FundingInvitee.get(orcid="12344")
    assert 12399 == funding_invitees.put_code
    assert "12344" == funding_invitees.orcid