def test_fg2volume(): data_path = os.path.split(oz.__file__)[0] + '/data/' pdb_file = data_path + 'FG_w_stats.pdb' nii_file = data_path + 'fp20110912_ecc.nii.gz' fg = ozv.nii2fg(oio.fg_from_pdb(pdb_file), nii_file) # Smoke testing this: vol = ozv.fg2volume(fg, 'fp20110912_ecc.nii.gz', shape=ni.load(nii_file).get_shape())
def test_nii2fg(): """ Testing the addition of information from a nifti volume to fiber groups nii2fg """ data_path = os.path.split(oz.__file__)[0] + '/data/' pdb_file = data_path + 'FG_w_stats.pdb' nii_file = data_path + 'fp20110912_ecc.nii.gz' # Smoke testing this: fg = ozv.nii2fg(oio.fg_from_pdb(pdb_file), nii_file)