def write(self, f):
dg = Datagram()
dg.appendData(self.HEADER)
if self.version >= (6, 27):
header_size = 6
elif self.version >= (5, 0):
header_size = 5
else:
header_size = 4
bam_major_ver, bam_minor_ver = self.version
dg.add_uint32(header_size)
dg.add_uint16(bam_major_ver)
dg.add_uint16(bam_minor_ver)
if header_size >= 5:
dg.add_uint8(self.file_endian)
if header_size >= 6:
dg.add_bool(self.stdfloat_double)
self.written_handles = []
self.write_long_pointers = False
if self.objects:
objects = list(self.objects.values())
self.write_object(dg, BamGlobals.BOC_push, objects[0], self.written_handles)
for obj in objects[1:]:
self.write_object(dg, BamGlobals.BOC_adjunct, obj, self.written_handles)
for data in self.file_datas:
self.write_file_data(dg, data)
if self.version >= (6, 21):
self.write_object(dg, BamGlobals.BOC_pop)
f.write(dg.getMessage())
def write(self, f, target_version):
dg = Datagram()
dg.appendData(self.HEADER)
if target_version >= (6, 27):
header_size = 6
elif target_version >= (5, 0):
header_size = 5
else:
header_size = 4
bam_major_ver, bam_minor_ver = target_version
dg.add_uint32(header_size)
dg.add_uint16(bam_major_ver)
dg.add_uint16(bam_minor_ver)
if header_size >= 5:
dg.add_uint8(self.file_endian)
if header_size >= 6:
dg.add_bool(self.stdfloat_double)
written_handles = []
if self.objects:
self.write_object(dg, BOC_push, self.objects[0], written_handles)
for obj in self.objects[1:]:
self.write_object(dg, BOC_adjunct, obj, written_handles)
for data in self.file_datas:
self.write_file_data(dg, data)
if self.version >= (6, 21):
self.write_object(dg, BOC_pop)
f.write(dg.getMessage())
