class PortsOut(gz.GZPortGroup):
enriched_motifs = gz.GZPort(self, "enriched_motifs")
class PortsIn(gz.GZPortGroup):
upstreamDistance = gz.GZPort(self, "upstreamDistance")
# allowInternal = gz.GZPort(self, "allowInternal")
downstreamDistance = gz.GZPort(self, "downstreamDistance")
species_genome = gz.GZPort(self, "species_genome")
class PortsIn(gz.GZPortGroup):
cp_both_wide_info = gz.GZPort(self, "cp_both_wide_info")
fc_threshold = gz.GZPort(self, "fc_threshold")
mm9_gene_motifs = gz.GZPort(self, "mm9_gene_motifs")
factortypes = gz.GZPort(self, "factortypes")
class PortsIn(gz.GZPortGroup):
cp_both_wide_info = gz.GZPort(self, "cp_both_wide_info")
chea = gz.GZPort(self, "chea")
fc_threshold = gz.GZPort(self, "fc_threshold")
factortypes = gz.GZPort(self, "factortypes")
class PortsOut(gz.GZPortGroup):
top_tfs = gz.GZPort(self, "top_tfs")
class PortsOut(gz.GZPortGroup):
mm9_motif_gene_counts = gz.GZPort(self, "mm9_motif_gene_counts")
class PortsOut(gz.GZPortGroup):
contrastPatterns = gz.GZPort(self, "contrastPatterns")
activePatterns = gz.GZPort(self, "activePatterns")
patternGroups = gz.GZPort(self, "patternGroups")
class PortsIn(gz.GZPortGroup):
cp_both_wide_info = gz.GZPort(self, "cp_both_wide_info")
def __init__(self, parent_node):
self.parent_node = parent_node
class PortsOut(gz.GZPortGroup):
factortypes = gz.GZPort(self, "factortypes")
def __init__(self, parent_node):
self.parent_node = parent_node
class PortsOut(gz.GZPortGroup):
tf_enrichment_stats = gz.GZPort(self, "tf_enrichment_stats")
class PortsIn(gz.GZPortGroup):
top_motifs = gz.GZPort(self, "top_motifs")
mm9_motif_gene_counts = gz.GZPort(self, "mm9_motif_gene_counts")
total_genes = gz.GZPort(self, "total_genes")
class PortsIn(gz.GZPortGroup):
top_tfs = gz.GZPort(self, "top_tfs")
tf_target_counts = gz.GZPort(self, "tf_target_counts")
total_genes = gz.GZPort(self, "total_genes")
class PortsOut(gz.GZPortGroup):
cp_both_wide_info = gz.GZPort(self, "cp_both_wide_info")
class PortsOut(gz.GZPortGroup):
mat_tf_graph = gz.GZPort(self, "mat_tf_graph")
class PortsOut(gz.GZPortGroup):
mm9_gene_motifs = gz.GZPort(self, "mm9_gene_motifs")
class PortsIn(gz.GZPortGroup):
cp_both_wide_info = gz.GZPort(self, "cp_both_wide_info")
factortypes = gz.GZPort(self, "factortypes")
class PortsOut(gz.GZPortGroup):
chea = gz.GZPort(self, "chea")
class PortsOut(gz.GZPortGroup):
tf_target_counts = gz.GZPort(self, "tf_target_counts")