def test_carcinoma_value():
text = 'suspicious for adenosquamous carcinoma'
jm = JarManager()
jm.cursory_diagnosis_examination(text)
jar = jm.get_current_jar()
assert jar.carcinoma_list[0][0] == 'adenosquamous carcinoma'
assert jar.carcinoma_list[0][1] == AssertionStatus.PROBABLE
def test_carcinoma_in_situ(text, situ_count, maybe_situ_count,
possible_situ_count):
jm = JarManager()
jm.cursory_diagnosis_examination(text)
assert jm.get_carcinoma_in_situ_count() == situ_count
assert jm.get_carcinoma_in_situ_maybe_count(
probable_only=True) == maybe_situ_count
assert jm.get_carcinoma_in_situ_maybe_count() == possible_situ_count
def test_villous_location(path, result, index):
"""
:param path:
:param result:
:param index:
* 0 - any
* 1 - proximal
* 2 - distal
* 3 - rectal
* 4 - unknown
:return:
"""
jm = JarManager()
jm.cursory_diagnosis_examination(path)
tbv = jm.get_histology(Histology.TUBULOVILLOUS)
vil = jm.get_histology(Histology.VILLOUS)
assert tbv[index] or vil[index] == result
def test_carcinoma_count():
text = 'adenosquamous carcinoma'
jm = JarManager()
jm.cursory_diagnosis_examination(text)
assert jm.get_carcinoma_maybe_count() == 0
assert jm.get_carcinoma_count() == 1
def test_carcinoma_count_non_colon():
text = 'stomach carcinoma'
jm = JarManager()
jm.cursory_diagnosis_examination(text)
assert jm.get_carcinoma_maybe_count() == 0
assert jm.get_carcinoma_count() == 0
def test_carcinoma_count_colonic_melanoma():
text = 'descending, adenoma, melanoma'
jm = JarManager()
jm.cursory_diagnosis_examination(text)
assert jm.get_carcinoma_maybe_count() == 0
assert jm.get_carcinoma_count() == 0
def test_carcinoma_count_rectal_melanoma():
text = 'rectal, adenoma, melanoma'
jm = JarManager()
jm.cursory_diagnosis_examination(text)
assert jm.get_carcinoma_maybe_count() == 0
assert jm.get_carcinoma_count() == 1
def test_villous_text(path, result):
jm = JarManager()
jm.cursory_diagnosis_examination(path)
tbv = jm.get_histology(Histology.TUBULOVILLOUS)
vil = jm.get_histology(Histology.VILLOUS)
assert tbv[0] or vil[0] == result